mRNA_Ecto-sp8_S_contig10357.583.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10357.583.1 vs. uniprot
Match: D7FNA8_ECTSI (Tryptophan-rich sensory-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNA8_ECTSI) HSP 1 Score: 366 bits (939), Expect = 5.270e-119 Identity = 188/190 (98.95%), Postives = 188/190 (98.95%), Query Frame = 1
Query: 4 GLLALMQGKLLPRLPAKWAQRTVFLTFGFLAMKSRTFSLLNARRPSLAKEKEEKIERRRPDWMPPIKAFPVIWITIGVLRALSTAMASVWEALGGNLVATPIAAMVLHLSVGDTWNHINNVEKKLGVAVSGVFLVWLSVANAVYRYYQVLPKAGLVLLPSLLWISVANLLVQSIWRLNGKEPLYPPKQTS 573
GLLALMQGKLLPRLPAKWAQRTVFLTFGFLAMKSRTFSLLNARRPSLAKEKEEKIERRRPDWMPPIKAFPVIWITIGVLRALSTAM VWEALGGNLVATPIAAMVLHLSVGDTWNHINNVEKKLGVAVSGVFLVWLSVANAVYRYYQVLPKAGLVLLPSLLWISVANLLVQSIWRLNGKEPLYPPKQTS
Sbjct: 109 GLLALMQGKLLPRLPAKWAQRTVFLTFGFLAMKSRTFSLLNARRPSLAKEKEEKIERRRPDWMPPIKAFPVIWITIGVLRALSTAM--VWEALGGNLVATPIAAMVLHLSVGDTWNHINNVEKKLGVAVSGVFLVWLSVANAVYRYYQVLPKAGLVLLPSLLWISVANLLVQSIWRLNGKEPLYPPKQTS 296
BLAST of mRNA_Ecto-sp8_S_contig10357.583.1 vs. uniprot
Match: A0A4D9CZE4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZE4_9STRA) HSP 1 Score: 184 bits (466), Expect = 4.220e-50 Identity = 96/172 (55.81%), Postives = 126/172 (73.26%), Query Frame = 1
Query: 61 QRTVFLT---FGFLAMKSRTFSLLNARRPSLAKEKEEKIERRRPDWMPPIKAFPVIWITIGVLRALSTAMASVWEALGGNLVATPIAAMVLHLSVGDTWNHINNVEKKLGVAVSGVFLVWLSVANAVYRYYQVLPKAGLVLLPSLLWISVANLLVQSIWRLNGKEPLYPPKQ 567
Q ++FL F F++++SR FS+L+ RP++A E ++ R+RP WMPP KAFPVIWI+IGVLR +++++ V+E L++ + A VLHLSVGDTWN I NVE + G +V GVFLVWLSV NAV Y Q LP AG VL PS +WI++AN+LV SIWRLNG EPLYP K+
Sbjct: 63 QASIFLVRAFFAFMSLRSRVFSILDNSRPTVAMEDRKRRLRKRPSWMPPAKAFPVIWISIGVLRTIASSL--VYETTN-TLLSPALLAFVLHLSVGDTWNTITNVEDRQGASVPGVFLVWLSVVNAVRMYAQTLPLAGKVLAPSAVWITIANVLVISIWRLNGAEPLYPFKK 231
BLAST of mRNA_Ecto-sp8_S_contig10357.583.1 vs. uniprot
Match: A0A7S2Y3H3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3H3_9STRA) HSP 1 Score: 180 bits (456), Expect = 1.310e-47 Identity = 92/168 (54.76%), Postives = 118/168 (70.24%), Query Frame = 1
Query: 70 VFLTFGFLAMKSRTFS-LLNARRPSLAKEKEEKIERRRPDWMPPIKAFPVIWITIGVLRALSTAMASVWEALGGNLVATPIAAMVLHLSVGDTWNHINNVEKKLGVAVSGVFLVWLSVANAVYRYYQVLPKAGLVLLPSLLWISVANLLVQSIWRLNGKEPLYPPKQT 570
V F F+++KSR FS L+ RPSL EK + +R+ P W PP AFP IW+TI LRA S+ M VWEA L+ P+ + +LHLS+GDTWN INNVE+++G +VS V LVWLSV NAV Y+ V AGLVLLPS +WIS+A +L+ SIW LNGKEPL+P K++
Sbjct: 150 VIAFFAFMSLKSRVFSPFLDNSRPSLKSEKSNRQKRKTPSWTPPPIAFPFIWLTIACLRATSSTM--VWEAKNCTLLNAPVLSFMLHLSIGDTWNCINNVERRMGASVSAVILVWLSVINAVRMYWGVSKTAGLVLLPSAIWISIATVLITSIWNLNGKEPLFPVKKS 315
BLAST of mRNA_Ecto-sp8_S_contig10357.583.1 vs. uniprot
Match: A0A7S3CF46_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CF46_9CHLO) HSP 1 Score: 178 bits (452), Expect = 4.090e-47 Identity = 91/175 (52.00%), Postives = 122/175 (69.71%), Query Frame = 1
Query: 43 LPAKWAQRTVFLTFGFLAMKSRTFSLLNARRPSLAKEKEEKIERRRPDWMPPIKAFPVIWITIGVLRALSTAMASVWEALGGNLVATPIAAMVLHLSVGDTWNHINNVEKKLGVAVSGVFLVWLSVANAVYRYYQVLPKAGLVLLPSLLWISVANLLVQSIWRLNGKEPLYPPKQ 567
LPAK VFL F F+A +SR FS L+ RRP+L E +E ER+RP WMPP AFP+IW TIG+LRA S+ + VW+ALGG + P+ + HL +GDTWN INNV+K+ GVA + V SV +A + Y+QV +AG++L PS +WIS+A+ LV SIW+LN ++PLYP K+
Sbjct: 142 LPAKAEGVAVFLFFLFMAFRSRIFSPLDNRRPTLKGESKEIAERKRPAWMPPPLAFPIIWSTIGILRATSSLL--VWKALGGKFLVWPLMVFLFHLCIGDTWNSINNVDKEYGVATLSMVFVVGSVYSACFSYWQVSQRAGMILAPSCVWISIASFLVFSIWKLNDRQPLYPVKK 314
BLAST of mRNA_Ecto-sp8_S_contig10357.583.1 vs. uniprot
Match: A0A7S0S4Y6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S4Y6_9CHLO) HSP 1 Score: 174 bits (441), Expect = 7.020e-46 Identity = 91/175 (52.00%), Postives = 114/175 (65.14%), Query Frame = 1
Query: 49 AKWAQRTVFLTFGFLAMKSRTFSLLNARRPSLAKEKEEKIERRRPDWMPPIKAFPVIWITIGVLRALSTAMASVWEALGGNLVATPIAAMVLHLSVGDTWNHINNVEKKLGVAVSGVFLVWLSVANAVYRYYQVLPKAGLVLLPSLLWISVANLLVQSIWRLNGKEPLYPPKQTS 573
AKW FL ++KSR FS L+A RP+L EK+ +R+RP WMPP FP++W TIG+LR +S+ M VWEA G + A P+ LHL+VGD WNHINNVE++ GVAV GV S AV YY AGLVL PS +WIS+A+LL+ SIW LNG++PLYP K S
Sbjct: 109 AKWLVTAFFLV---TSIKSRIFSPLDASRPTLKGEKKAMSDRKRPSWMPPPVTFPIVWSTIGLLRGISSVM--VWEACGRDATALPLVVFCLHLAVGDCWNHINNVERRAGVAVPGVLCCLASCVAAVAAYYNTDTTAGLVLAPSAVWISIASLLIYSIWDLNGRDPLYPTKGES 278
BLAST of mRNA_Ecto-sp8_S_contig10357.583.1 vs. uniprot
Match: L1JGW3_GUITC (Uncharacterized protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1JGW3_GUITC) HSP 1 Score: 173 bits (438), Expect = 7.530e-46 Identity = 81/163 (49.69%), Postives = 118/163 (72.39%), Query Frame = 1
Query: 76 LTFGFLAMKSRTFSLLNARRPSLAKEKEEKIERRRPDWMPPIKAFPVIWITIGVLRALSTAMASVWEALGGNLVATPIAAMVLHLSVGDTWNHINNVEKKLGVAVSGVFLVWLSVANAVYRYYQVLPKAGLVLLPSLLWISVANLLVQSIWRLNGKEPLYPPK 564
L F +A+KSR FS+L+A RP++ + +E K RP W PP FP++W TIG+LR +S+ + VWEA+G ++ P+ AM+ HLS+GDTWN+INNVE++ G AV+GV VW SV Y Y+Q +P AG++L PS+LW+S+A++L+ +IW+LNG EP+ P K
Sbjct: 97 LFFASMALKSRIFSILDASRPTMGEVQETK----RPSWTPPPIVFPIVWSTIGILRTVSSVV--VWEAVGRQMLVLPLIAMMTHLSIGDTWNNINNVERRKGSAVAGVAFVWTSVVTCTYLYWQTIPLAGMILAPSVLWLSIASVLIFNIWKLNGYEPILPYK 253
BLAST of mRNA_Ecto-sp8_S_contig10357.583.1 vs. uniprot
Match: A0A5B8MC26_9CHLO (TspO/MBR-like protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MC26_9CHLO) HSP 1 Score: 171 bits (434), Expect = 1.270e-44 Identity = 93/177 (52.54%), Postives = 116/177 (65.54%), Query Frame = 1
Query: 43 LPAKWAQRTVFLTFGFLAMKSRTFSLLNARRPSLAKEKEEKIERRRPDWMPPIKAFPVIWITIGVLRALSTAMASVWEALGGNLVATPIAAMVLHLSVGDTWNHINNVEKKLGVAVSGVFLVWLSVANAVYRYYQVLPKAGLVLLPSLLWISVANLLVQSIWRLNGKEPLYPPKQTS 573
LP + TVFL F F+A +SR FS L+ RP+L+ E +E ER+RP W PP AFP+IW TIG+LRA S+ + VW ALGG + PI + HL VGDTWN INNV+K GVA + V +V A Y Y+ V KAGLVL PS +WI A+ LV SIW+LN + PLYP K+TS
Sbjct: 133 LPGRVKSTTVFLFFLFMAFRSRVFSPLDNSRPTLSSETKEIQERKRPSWCPPPIAFPIIWTTIGILRAASSLI--VWNALGGKFLVGPIMIFLGHLCVGDTWNSINNVDKLYGVATLTMVFVVATVCLADYAYFTVSRKAGLVLAPSAVWIVTASFLVFSIWKLNDRPPLYPVKKTS 307
BLAST of mRNA_Ecto-sp8_S_contig10357.583.1 vs. uniprot
Match: A0A7S0WK81_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WK81_9CHLO) HSP 1 Score: 170 bits (431), Expect = 2.430e-44 Identity = 87/169 (51.48%), Postives = 113/169 (66.86%), Query Frame = 1
Query: 58 AQRTVFLTFGFLAMKSRTFSLLNARRPSLAKEKEEKIERRRPDWMPPIKAFPVIWITIGVLRALSTAMASVWEALGGNLVATPIAAMVLHLSVGDTWNHINNVEKKLGVAVSGVFLVWLSVANAVYRYYQVLPKAGLVLLPSLLWISVANLLVQSIWRLNGKEPLYPPK 564
A+ V + F LA +SR FS LNA RP +A E++ K ER+RP W PP FP++WI++G LR+LST M A G +V I A+V HLS+GDTWN INNVEKKLG A GV V S N V +YY V+P AG V+ P +W+++A+ LV +IW +NGK+PLYP K
Sbjct: 128 AKAIVAVMFFMLAFRSRVFSPLNASRPKIANERKAKQERKRPSWTPPAVVFPLVWISMGFLRSLSTMMVF---ATTGTVVHPAIIALVAHLSIGDTWNSINNVEKKLGAAAVGVLFVVSSAYNVVAQYYNVIPTAGYVIAPLAVWLTIASALVWNIWAINGKQPLYPTK 293
BLAST of mRNA_Ecto-sp8_S_contig10357.583.1 vs. uniprot
Match: A0A061RD28_9CHLO (Tryptophan-rich sensory protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RD28_9CHLO) HSP 1 Score: 171 bits (432), Expect = 2.490e-44 Identity = 87/169 (51.48%), Postives = 116/169 (68.64%), Query Frame = 1
Query: 67 TVFLTFGFLAMKSRTFSLLNARRPSLAKEKEEKIERRRPDWMPPIKAFPVIWITIGVLRALSTAMASVWEALGGNLVATPIAAMVLHLSVGDTWNHINNVEKKLGVAVSGVFLVWLSVANAVYRYYQVLPKAGLVLLPSLLWISVANLLVQSIWRLNGKEPLYPPKQTS 573
T+ + F +A++SR S L+ RPS + E +E +RP WMPP FP++W TI VLR++ST M VWEA G +L+ PI+ VLHL VGDTWN INNVE++ G A V LVW + NA+++YYQV P AG VL P +W+SVA++LV SIW +NGKE L+P K+ S
Sbjct: 142 TIAIFFLAMAVRSRILSPLDNSRPSRSSESKEISAGKRPSWMPPPVVFPIVWSTIAVLRSVSTTM--VWEASGRDLLIAPISWFVLHLCVGDTWNTINNVEQRKGTAAVVVLLVWATAXNAIFQYYQVSPTAGYVLAPLAVWLSVASVLVWSIWAINGKENLFPMKEAS 308
BLAST of mRNA_Ecto-sp8_S_contig10357.583.1 vs. uniprot
Match: A0A7S4LLX5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LLX5_9EUGL) HSP 1 Score: 172 bits (437), Expect = 2.920e-44 Identity = 89/174 (51.15%), Postives = 113/174 (64.94%), Query Frame = 1
Query: 43 LPAKWAQRTVFLTFGFLAMKSRTFSLLNARRPSLAKEKEEKIERRRPDWMPPIKAFPVIWITIGVLRALSTAMASVWEALGGNLVATPIAAMVLHLSVGDTWNHINNVEKKLGVAVSGVFLVWLSVANAVYRYYQVLPKAGLVLLPSLLWISVANLLVQSIWRLNGKEPLYPPK 564
LP Q V L F F ++KSR FS L+ RP++ KE++E E++RP WMPP FP++W +I VLR +S M +W LG L+ TPI L LS+GDT+N INNVEK++G A V VW + Y YYQ LP AGLVLLP +W+S+A L+ SIWRLNG EPLYP K
Sbjct: 208 LPVLVPQVLVVLFFAFTSLKSRVFSPLDNSRPTVNKEQKEIDEKKRPSWMPPPLVFPIVWTSIAVLRTISGYM--IWNGLGQTLLVTPIMVYFLGLSIGDTFNTINNVEKRMGTAFIAVLFVWSTFLAVNYIYYQALPTAGLVLLPQSIWLSIATCLIYSIWRLNGAEPLYPYK 379 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10357.583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10357.583.1 >prot_Ecto-sp8_S_contig10357.583.1 ID=prot_Ecto-sp8_S_contig10357.583.1|Name=mRNA_Ecto-sp8_S_contig10357.583.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=186bp MQGKLLPRLPAKWAQRTVFLTFGFLAMKSRTFSLLNARRPSLAKEKEEKIback to top mRNA from alignment at Ecto-sp8_S_contig10357:10..4515+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10357.583.1 ID=mRNA_Ecto-sp8_S_contig10357.583.1|Name=mRNA_Ecto-sp8_S_contig10357.583.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4506bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10357:10..4515+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10357:10..4515+ >mRNA_Ecto-sp8_S_contig10357.583.1 ID=mRNA_Ecto-sp8_S_contig10357.583.1|Name=mRNA_Ecto-sp8_S_contig10357.583.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=558bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10357:10..4515+ (Ectocarpus species8 EcLAC_412)back to top |