mRNA_Ecto-sp8_S_contig103089.507.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig103089.507.1 vs. uniprot
Match: UPI000C77844F (nascent polypeptide-associated complex subunit alpha-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C77844F) HSP 1 Score: 176 bits (446), Expect = 3.100e-53 Identity = 110/148 (74.32%), Postives = 119/148 (80.41%), Query Frame = 1
Query: 1 MPEMTEIIDSKPPQDDEVQDSGTDSDGDDADSIPELEDTTVA-EGSAAAAVDAVAAAAGLGDEGVSKNKQSRGEKKARKIMSKLGLKPVTGVSRVTIRKSKNILFVIQKPDVYKNPASDTYIVFGEAKIEDLSQQAQMEAAQKFKNAE 441
MPEMTE + +KP + ++ DSGTDSDG+D SIPELE+T EGSA AA D + A K+KQSRGEKKARKIMSKLGLK VTGVSRVTIRKSKNILFVI KPDVYKNPASDTYIVFGEAKIEDLSQQAQMEAAQKFK AE
Sbjct: 1 MPEMTEALTTKPEEVNQENDSGTDSDGED--SIPELEETAAGGEGSAVAAGDDMTAG---------KSKQSRGEKKARKIMSKLGLKQVTGVSRVTIRKSKNILFVINKPDVYKNPASDTYIVFGEAKIEDLSQQAQMEAAQKFKAAE 137
BLAST of mRNA_Ecto-sp8_S_contig103089.507.1 vs. uniprot
Match: C1BSG2_LEPSM (Nascent polypeptide associated complex protein alpha subunit CG8759PBlike [Tribolium castaneum] n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=C1BSG2_LEPSM) HSP 1 Score: 166 bits (421), Expect = 2.150e-49 Identity = 105/153 (68.63%), Postives = 123/153 (80.39%), Query Frame = 1
Query: 1 MPEMTEIIDSKPPQDDEVQD---SGTDSDGDDADSIPELEDTTVAEGSAAAAVDAVAAAAGLGDEGVSKNKQSRGEKKARKIMSKLGLKPVTGVSRVTIRKSKNILFVIQKPDVYKNPASDTYIVFGEAKIEDLSQQAQMEAAQKFKNAEVPQ 450
MPE TE++ KP + EV+D SG+DSD ++S+P+L+++T +AA +AAAAG+ +E SK KQSRGEKKARKIMSKLGLK VTGVSRVTIRKSKNILFVI KPD+YKNP+SDTYIVFGEAKIEDLS QAQMEAAQKFK AE PQ
Sbjct: 1 MPEQTEVLTKKPQE--EVEDDKESGSDSD---SESMPDLDEST----NAATGQSPLAAAAGV-EEPTSKAKQSRGEKKARKIMSKLGLKQVTGVSRVTIRKSKNILFVINKPDIYKNPSSDTYIVFGEAKIEDLSHQAQMEAAQKFKAAEAPQ 143
BLAST of mRNA_Ecto-sp8_S_contig103089.507.1 vs. uniprot
Match: E9HE95_DAPPU (NAC-A/B domain-containing protein n=6 Tax=Daphnia TaxID=6668 RepID=E9HE95_DAPPU) HSP 1 Score: 158 bits (399), Expect = 3.740e-46 Identity = 98/148 (66.22%), Postives = 110/148 (74.32%), Query Frame = 1
Query: 1 MPEMTEIIDSKPPQDDEVQDSGTDSDGDDADSIPELEDTTVAEGSAAAAVDAVAAAAGLGDEGVSKNKQSRGEKKARKIMSKLGLKPVTGVSRVTIRKSKNILFVIQKPDVYKNPASDTYIVFGEAKIEDLSQQAQMEAAQKFKNAEV 444
MP++TE+ P +QD ++D D DS+PELED A VAAAAGL +E VSK KQSRGEKKARKIMSKLGLK VTGVSRVTIRKS+NILFVI KPDVYKNPASDTYIVFGEAKIEDL+QQA M A +KFK E+
Sbjct: 1 MPQVTELEKGAPT----IQDGSDNTDSDSDDSVPELEDA------ATGVQSQVAAAAGLPEELVSKAKQSRGEKKARKIMSKLGLKQVTGVSRVTIRKSRNILFVINKPDVYKNPASDTYIVFGEAKIEDLNQQAHMAAVEKFKAPEL 138
BLAST of mRNA_Ecto-sp8_S_contig103089.507.1 vs. uniprot
Match: A0A6L5CLA6_9INSE (NAC-A/B domain-containing protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5CLA6_9INSE) HSP 1 Score: 157 bits (398), Expect = 6.700e-46 Identity = 102/152 (67.11%), Postives = 117/152 (76.97%), Query Frame = 1
Query: 1 MPEMTEI---IDSKPPQDDEVQDSGTDSDGDDADSIPELEDTTVAEGSAAAAVDA-VAAAAGLGDEGVSKNKQSRGEKKARKIMSKLGLKPVTGVSRVTIRKSKNILFVIQKPDVYKNPASDTYIVFGEAKIEDLSQQAQMEAAQKFKNAEV 444
MPE+TE+ S + + SGT+SD D+ SIPELED +G + +AAAAGL ++ VSK KQSRGEKKARKIMSKLGLKPVTGV+RVTIRKSK+ILFVI KPDVYKNPASDTYIVFGEAKIEDLSQQAQ+ AA+KFK EV
Sbjct: 1 MPELTELDKATASMTERREAASGSGTESDSDE--SIPELEDADKGQGQFPGSTALHMAAAAGLPEDMVSKAKQSRGEKKARKIMSKLGLKPVTGVNRVTIRKSKSILFVINKPDVYKNPASDTYIVFGEAKIEDLSQQAQVAAAEKFKAPEV 150
BLAST of mRNA_Ecto-sp8_S_contig103089.507.1 vs. uniprot
Match: A0A8J6H7E5_TENMO (NAC-A/B domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6H7E5_TENMO) HSP 1 Score: 157 bits (396), Expect = 2.680e-45 Identity = 100/145 (68.97%), Postives = 110/145 (75.86%), Query Frame = 1
Query: 1 MPEMTEIIDSKPPQDDEVQDSGTDSDGDDADSIPELEDTTVAEGSAAAAVDAVAAAAGLGDEGVSKNKQSRGEKKARKIMSKLGLKPVTGVSRVTIRKSKNILFVIQKPDVYKNPASDTYIVFGEAKIEDLSQQAQMEAAQKFKN 435
MPEMTE+ P+ Q S + +D D + IPELED A A A A AAAGL + VSK KQSRGEKKARKIMSKLGLKPVTGV+RVTIRKSKNILFVI KPDVYKNP SDTYIVFGEAKIEDLSQQAQ+ AA+KFK+
Sbjct: 1 MPEMTEVEKPVVPETKPEQ-SASSTDSDSEEEIPELEDAGAANAGATAFPGA--AAAGLPIDMVSKAKQSRGEKKARKIMSKLGLKPVTGVNRVTIRKSKNILFVINKPDVYKNPVSDTYIVFGEAKIEDLSQQAQVAAAEKFKD 142
BLAST of mRNA_Ecto-sp8_S_contig103089.507.1 vs. uniprot
Match: V5GCS8_ANOGL (Nascent polypeptide-associated complex subunit alpha n=3 Tax=Cucujiformia TaxID=41088 RepID=V5GCS8_ANOGL) HSP 1 Score: 155 bits (393), Expect = 3.820e-45 Identity = 103/149 (69.13%), Postives = 112/149 (75.17%), Query Frame = 1
Query: 1 MPEMTEI-----IDSKPPQDDEVQDSGTDSDGDDADSIPELEDTTVAEGSAAAAVDAVAAAAGLGDEGVSKNKQSRGEKKARKIMSKLGLKPVTGVSRVTIRKSKNILFVIQKPDVYKNPASDTYIVFGEAKIEDLSQQAQMEAAQKFK 432
MPEMTE+ ++KP Q +S TDSD D+ IPELED A +AA A AAAGL + VSK KQSRGEKKARKIMSKLGLKPV GVSRVTIRKSKNILFVI KPDVYKNP SDTYIVFGEAKIEDLS QAQ+ AA+KFK
Sbjct: 1 MPEMTEVEKPVVAEAKPEQ----SESSTDSDSDEE--IPELEDAGTANAGSAAFPGA--AAAGLPIDMVSKAKQSRGEKKARKIMSKLGLKPVQGVSRVTIRKSKNILFVINKPDVYKNPVSDTYIVFGEAKIEDLSTQAQVAAAEKFK 141
BLAST of mRNA_Ecto-sp8_S_contig103089.507.1 vs. uniprot
Match: A0A553NVR3_TIGCA (NAC-A/B domain-containing protein (Fragment) n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NVR3_TIGCA) HSP 1 Score: 154 bits (390), Expect = 4.340e-45 Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 1
Query: 157 VAAAAGLGDEGVSKNKQSRGEKKARKIMSKLGLKPVTGVSRVTIRKSKNILFVIQKPDVYKNPASDTYIVFGEAKIEDLSQQAQMEAAQKFKNAEVPQ 450
+AAAAGL ++ VSK KQSRGEKKARKIMSKLGLK V GVSRVTIRKSKNILFVI KPDVYKNPASDTYIVFGEAKIEDLSQQAQMEAAQKFK AE PQ
Sbjct: 14 LAAAAGLNEDLVSKAKQSRGEKKARKIMSKLGLKNVAGVSRVTIRKSKNILFVITKPDVYKNPASDTYIVFGEAKIEDLSQQAQMEAAQKFKAAEAPQ 111
BLAST of mRNA_Ecto-sp8_S_contig103089.507.1 vs. uniprot
Match: D6WPS6_TRICA (Nascent polypeptide-associated complex subunit alpha-like Protein n=2 Tax=Polyphaga TaxID=41084 RepID=D6WPS6_TRICA) HSP 1 Score: 155 bits (392), Expect = 5.260e-45 Identity = 99/144 (68.75%), Postives = 109/144 (75.69%), Query Frame = 1
Query: 1 MPEMTEIIDSKPPQDDEVQDSGTDSDGDDADSIPELEDTTVAEGSAAAAVDAVAAAAGLGDEGVSKNKQSRGEKKARKIMSKLGLKPVTGVSRVTIRKSKNILFVIQKPDVYKNPASDTYIVFGEAKIEDLSQQAQMEAAQKFK 432
MPEMTE+ P+ Q S + +D + D IPELED A +A A AAAGL + VSK KQSRGEKKARKIMSKLGLKPVTGV+RVTIRKSKNILFVI KPDVYKNP SDTYIVFGEAKIEDLSQQAQ+ AA+KFK
Sbjct: 1 MPEMTEVEKPVVPETKPEQ-SASSTDSESEDEIPELEDAGAANSGTSAFPGA--AAAGLPIDMVSKAKQSRGEKKARKIMSKLGLKPVTGVNRVTIRKSKNILFVINKPDVYKNPVSDTYIVFGEAKIEDLSQQAQVAAAEKFK 141
BLAST of mRNA_Ecto-sp8_S_contig103089.507.1 vs. uniprot
Match: A0A6P4ZKD6_BRABE (nascent polypeptide-associated complex subunit alpha-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZKD6_BRABE) HSP 1 Score: 155 bits (392), Expect = 5.740e-45 Identity = 98/152 (64.47%), Postives = 116/152 (76.32%), Query Frame = 1
Query: 1 MPEMTEI----IDSKPPQDDEVQDSGTDSDGDDADSIPELEDTTVAEGSAAAAVDAVAAAAGLGDEGVSKNKQSRGEKKARKIMSKLGLKPVTGVSRVTIRKSKNILFVIQKPDVYKNPASDTYIVFGEAKIEDLSQQAQMEAAQKFKNAEV 444
MPE+TE+ +++KP + ++V T+SD DD S+PELED EG + + +A AG+ +E VSK KQSR EKKARK MSKLGLK TGVSRVTIRKSKNILFVI KPDVYK+PASDTYIVFGEAKIEDLSQQAQM AA+KFK E+
Sbjct: 1 MPELTEVDMAEVETKPAEQNKVSSEDTESDSDD--SLPELEDA--GEGLPTSQQEQMAQMAGIQEEPVSKAKQSRQEKKARKAMSKLGLKQFTGVSRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQMAAAEKFKAPEM 148
BLAST of mRNA_Ecto-sp8_S_contig103089.507.1 vs. uniprot
Match: A0A7R8D1A1_LEPSM (Transcription factor BTF3 n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A7R8D1A1_LEPSM) HSP 1 Score: 166 bits (421), Expect = 6.710e-45 Identity = 105/153 (68.63%), Postives = 123/153 (80.39%), Query Frame = 1
Query: 1 MPEMTEIIDSKPPQDDEVQD---SGTDSDGDDADSIPELEDTTVAEGSAAAAVDAVAAAAGLGDEGVSKNKQSRGEKKARKIMSKLGLKPVTGVSRVTIRKSKNILFVIQKPDVYKNPASDTYIVFGEAKIEDLSQQAQMEAAQKFKNAEVPQ 450
MPE TE++ KP + EV+D SG+DSD ++S+P+L+++T +AA +AAAAG+ +E SK KQSRGEKKARKIMSKLGLK VTGVSRVTIRKSKNILFVI KPD+YKNP+SDTYIVFGEAKIEDLS QAQMEAAQKFK AE PQ
Sbjct: 25 MPEQTEVLTKKPQE--EVEDDKESGSDSD---SESMPDLDEST----NAATGQSPLAAAAGV-EEPTSKAKQSRGEKKARKIMSKLGLKQVTGVSRVTIRKSKNILFVINKPDIYKNPSSDTYIVFGEAKIEDLSHQAQMEAAQKFKAAEAPQ 167 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig103089.507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig103089.507.1 >prot_Ecto-sp8_S_contig103089.507.1 ID=prot_Ecto-sp8_S_contig103089.507.1|Name=mRNA_Ecto-sp8_S_contig103089.507.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=150bp MPEMTEIIDSKPPQDDEVQDSGTDSDGDDADSIPELEDTTVAEGSAAAAVback to top mRNA from alignment at Ecto-sp8_S_contig103089:78..527+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig103089.507.1 ID=mRNA_Ecto-sp8_S_contig103089.507.1|Name=mRNA_Ecto-sp8_S_contig103089.507.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=450bp|location=Sequence derived from alignment at Ecto-sp8_S_contig103089:78..527+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig103089:78..527+ >mRNA_Ecto-sp8_S_contig103089.507.1 ID=mRNA_Ecto-sp8_S_contig103089.507.1|Name=mRNA_Ecto-sp8_S_contig103089.507.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=450bp|location=Sequence derived from alignment at Ecto-sp8_S_contig103089:78..527+ (Ectocarpus species8 EcLAC_412)back to top |