prot_Ecto-sp8_S_contig99778.31858.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig99778.31858.1
Unique Nameprot_Ecto-sp8_S_contig99778.31858.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length63
Homology
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BLAST of mRNA_Ecto-sp8_S_contig99778.31858.1 vs. uniprot
Match: D7FI53_ECTSI (SMK-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI53_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 1.690e-18
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 
Query:    2 TLLKVLLADNLFVDMAGVFEYDLELKEKGDHRKFLTQTASFKQV 45
            TLL+VLLADNLFVDMAGVFEYDLELKEKGDHRKFLTQTASFKQV
Sbjct:  189 TLLEVLLADNLFVDMAGVFEYDLELKEKGDHRKFLTQTASFKQV 232
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BLAST of mRNA_Ecto-sp8_S_contig99778.31858.1 vs. uniprot
Match: A0A6H5KKJ6_9PHAE (SMK-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ6_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 8.100e-18
Identity = 42/44 (95.45%), Postives = 44/44 (100.00%), Query Frame = 0 
Query:    2 TLLKVLLADNLFVDMAGVFEYDLELKEKGDHRKFLTQTASFKQV 45
            TLL+VLLADNLFVDMAGVFEYDLELKEKG+HRKFLTQTASFKQV
Sbjct:  299 TLLEVLLADNLFVDMAGVFEYDLELKEKGNHRKFLTQTASFKQV 342
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BLAST of mRNA_Ecto-sp8_S_contig99778.31858.1 vs. uniprot
Match: A0A7S3YI92_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YI92_HETAK)

HSP 1 Score: 60.8 bits (146), Expect = 2.740e-9
Identity = 29/44 (65.91%), Postives = 34/44 (77.27%), Query Frame = 0 
Query:    2 TLLKVLLADNLFVDMAGVFEYDLELKEKGDHRKFLTQTASFKQV 45
            TLL+V+L+D  FV +AGVFEYD ELK KGDHR FL +   FKQV
Sbjct:  196 TLLEVILSDQFFVRVAGVFEYDPELKHKGDHRTFLQEKVQFKQV 239
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BLAST of mRNA_Ecto-sp8_S_contig99778.31858.1 vs. uniprot
Match: A0A836CNC7_9STRA (Component of IIS longevity pathway SMK-1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNC7_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 1.180e-5
Identity = 22/40 (55.00%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:    6 VLLADNLFVDMAGVFEYDLELKEKGDHRKFLTQTASFKQV 45
            +LL+D  F  MAGVFEYD EL+ + +HR FL ++A+FKQ+
Sbjct:    1 MLLSDRFFNRMAGVFEYDPELRCRAEHRAFLDRSATFKQI 40
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig99778.31858.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FI53_ECTSI1.690e-1897.73SMK-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KKJ6_9PHAE8.100e-1895.45SMK-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S3YI92_HETAK2.740e-965.91Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A836CNC7_9STRA1.180e-555.00Component of IIS longevity pathway SMK-1-domain-co... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006887Domain of unknown function DUF625PFAMPF04802SMK-1coord: 2..46
e-value: 5.8E-10
score: 39.3
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..44
NoneNo IPR availableTMHMMTMhelixcoord: 44..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig99778contigEcto-sp8_S_contig99778:355..543 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig99778.31858.1mRNA_Ecto-sp8_S_contig99778.31858.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig99778 355..543 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig99778.31858.1 ID=prot_Ecto-sp8_S_contig99778.31858.1|Name=mRNA_Ecto-sp8_S_contig99778.31858.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=63bp
TTLLKVLLADNLFVDMAGVFEYDLELKEKGDHRKFLTQTASFKQVHYYFL
CLLYCCIVMTYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006887DUF625