prot_Ecto-sp8_S_contig99491.31819.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig99491.31819.1
Unique Nameprot_Ecto-sp8_S_contig99491.31819.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length108
Homology
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BLAST of mRNA_Ecto-sp8_S_contig99491.31819.1 vs. uniprot
Match: D8LPG4_ECTSI (EsV-1-138 n=2 Tax=root TaxID=1 RepID=D8LPG4_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 6.220e-66
Identity = 105/108 (97.22%), Postives = 107/108 (99.07%), Query Frame = 0 
Query:    1 TAGALWYQVASPASHQELVGNGKAIRQIEDWFSEASAEPETSSCLFLHGESGTGKSTAVTMIAQKHEFRTVTTYADRSRTPARLEGVVREAGVHGPRGVVVLDDFEIF 108
            TAGALWYQVASP SHQELVGNGKAIRQIEDWFSEASAEPETS+CLFLHGESGTGKSTAVTMIAQKHEF+TVTTYADRSRTPARLEGVVREAGVHGPRGVVVLDDFEIF
Sbjct:   23 TAGALWYQVASPTSHQELVGNGKAIRQIEDWFSEASAEPETSACLFLHGESGTGKSTAVTMIAQKHEFKTVTTYADRSRTPARLEGVVREAGVHGPRGVVVLDDFEIF 130
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BLAST of mRNA_Ecto-sp8_S_contig99491.31819.1 vs. uniprot
Match: A0A836CHP7_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHP7_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.130e-6
Identity = 31/104 (29.81%), Postives = 56/104 (53.85%), Query Frame = 0 
Query:    5 LWYQVASPASHQELVGNGKAIRQIEDWFSEASAEPETSSCLFLHGESGTGKSTAVTMIAQKHEFRTVTTYADRSRTPARLEGVVREAGVHGPRGVVVLDDFEIF 108
            +W++  +P +  +L+GN  +I+ I  WF   + +      L + G  GTGK+TAV ++A ++      T +D  RT  +L G++  AG    + V+ LD+ + F
Sbjct:   32 MWFETCAPEASSQLIGNKDSIKAINAWFKGGAVQK----VLVVVGAPGTGKTTAVRLLAHENGVDIHITGSDVPRTQTQLAGIINNAGA--VQQVLFLDEADSF 129
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig99491.31819.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPG4_ECTSI6.220e-6697.22EsV-1-138 n=2 Tax=root TaxID=1 RepID=D8LPG4_ECTSI[more]
A0A836CHP7_9STRA1.130e-629.81P-loop containing nucleoside triphosphate hydrolas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 4..101
e-value: 1.3E-12
score: 50.1
NoneNo IPR availablePFAMPF03215Rad17coord: 4..69
e-value: 3.6E-6
score: 27.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig99491contigEcto-sp8_S_contig99491:5..328 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig99491.31819.1mRNA_Ecto-sp8_S_contig99491.31819.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig99491 5..328 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig99491.31819.1 ID=prot_Ecto-sp8_S_contig99491.31819.1|Name=mRNA_Ecto-sp8_S_contig99491.31819.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=108bp
TAGALWYQVASPASHQELVGNGKAIRQIEDWFSEASAEPETSSCLFLHGE
SGTGKSTAVTMIAQKHEFRTVTTYADRSRTPARLEGVVREAGVHGPRGVV
VLDDFEIF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase