prot_Ecto-sp8_S_contig99339.31796.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig99339.31796.1
Unique Nameprot_Ecto-sp8_S_contig99339.31796.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length56
Homology
BLAST of mRNA_Ecto-sp8_S_contig99339.31796.1 vs. uniprot
Match: D8LK31_ECTSI (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK31_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 8.020e-31
Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 0
Query:    1 MFTEPADQSVWWYHHFLLTWADDGTDSCSDSERYENVLRAEAATLGELIEVEGRCK 56
            MFTEPADQSVWWYHHFLLTWADDGTDSCSDSERYEN+LRAEAATLGELIEVE RCK
Sbjct:  247 MFTEPADQSVWWYHHFLLTWADDGTDSCSDSERYENILRAEAATLGELIEVEVRCK 302          
BLAST of mRNA_Ecto-sp8_S_contig99339.31796.1 vs. uniprot
Match: A0A7S0C567_9STRA (Geranylgeranyl transferase type-2 subunit alpha (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C567_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 3.960e-9
Identity = 29/68 (42.65%), Postives = 40/68 (58.82%), Query Frame = 0
Query:    1 MFTEPADQSVWWYHHFLLTWA-----------DDGTDSCSDSERYENVLRAEAATLGELIEVE-GRCK 56
            +FTEP DQ+ WWYH F++ WA           DD   S +  E Y ++L+ EA ++ EL+E E GRCK
Sbjct:   55 IFTEPDDQTAWWYHRFMIVWASPSRLLESSTSDDSCISQAMMETYVDILKEEAESIEELVEAEDGRCK 122          
BLAST of mRNA_Ecto-sp8_S_contig99339.31796.1 vs. uniprot
Match: A0A835Z1Z5_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z5_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.270e-8
Identity = 25/55 (45.45%), Postives = 33/55 (60.00%), Query Frame = 0
Query:    2 FTEPADQSVWWYHHFLLTWADDGTDSCSDSERYENVLRAEAATLGELIEVEGRCK 56
            FTEP DQS WWYH FL+ WA +        ++Y  +L+ E   + EL+ VE RCK
Sbjct:  232 FTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPELLQKEVDCIRELLFVEERCK 286          
BLAST of mRNA_Ecto-sp8_S_contig99339.31796.1 vs. uniprot
Match: A0A6S8XW41_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8XW41_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 4.260e-7
Identity = 23/57 (40.35%), Postives = 36/57 (63.16%), Query Frame = 0
Query:    1 MFTEPADQSVWWYHHFLLTWADDGTDSCSDSERYENVLRAEAATLGELIEVE-GRCK 56
            +FTEP DQ+ WWY  F+L+W  D +    D E Y+ +L  E  ++ +L++ E G+CK
Sbjct: 1087 VFTEPDDQTSWWYFRFILSWMRDESTKTLDDEEYKRILYQEWESIHDLVDAEDGQCK 1143          
BLAST of mRNA_Ecto-sp8_S_contig99339.31796.1 vs. uniprot
Match: A0A7S2UPE6_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPE6_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 7.870e-7
Identity = 26/61 (42.62%), Postives = 35/61 (57.38%), Query Frame = 0
Query:    1 MFTEPADQSVWWYHHFLLTWADDGTDSCSDSERYEN----VLRAEAATLGELIEVE-GRCK 56
            +FTEP DQ+ WWYH FLL WA    +   + +  +     +L  EA TL +LIE E  +CK
Sbjct:  357 IFTEPDDQTAWWYHRFLLQWAQPNNNDADNDDNVQKEFCQLLEQEAETLRDLIETEENQCK 417          
BLAST of mRNA_Ecto-sp8_S_contig99339.31796.1 vs. uniprot
Match: A0A7S2V4C9_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4C9_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 1.750e-5
Identity = 25/65 (38.46%), Postives = 34/65 (52.31%), Query Frame = 0
Query:    1 MFTEPADQSVWWYHHFLLTWADDGTDSCSDSE---------RYENVLRAEAATLGELIEVEGRCK 56
            +FTEP DQS WWY  FLL WA  G      SE         R+E +L  +   + +L+++E  CK
Sbjct:   20 IFTEPDDQSAWWYFQFLLGWARQGKPPGFQSEIRQGQDVHPRFEAILADQIDKVRQLLDIEQGCK 84          
BLAST of mRNA_Ecto-sp8_S_contig99339.31796.1 vs. uniprot
Match: K0SFY6_THAOC (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SFY6_THAOC)

HSP 1 Score: 48.5 bits (114), Expect = 4.620e-5
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0
Query:    1 MFTEPADQSVWWYHHFLLTWADDGTDSCSD-SERYENVLRAEAATLGELIEVE 52
            +FTEP DQ+VWWYH F++++A    D   D  E Y+  L   A +L EL+ VE
Sbjct:  288 IFTEPDDQTVWWYHRFVVSYAKPPDDVSDDLKEEYDLFLHDMAESLRELLAVE 340          
BLAST of mRNA_Ecto-sp8_S_contig99339.31796.1 vs. uniprot
Match: A0A7S2WBC6_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBC6_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 6.320e-5
Identity = 27/63 (42.86%), Postives = 30/63 (47.62%), Query Frame = 0
Query:    1 MFTEPADQSVWWYHHFLLTWADDGTDSCSDSE-------RYENVLRAEAATLGELIEVEGRCK 56
            +FTEP DQS WWYH FLL W   G      SE          ++LR E   L ELI V    K
Sbjct:  250 VFTEPDDQSAWWYHRFLLDWGTRGALQAPRSEDDGQELGELVSILRGEVDQLEELIGVSPESK 312          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig99339.31796.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LK31_ECTSI8.020e-3196.43Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A7S0C567_9STRA3.960e-942.65Geranylgeranyl transferase type-2 subunit alpha (F... [more]
A0A835Z1Z5_9STRA1.270e-845.45Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A6S8XW41_9STRA4.260e-740.35Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2UPE6_9STRA7.870e-742.62Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A7S2V4C9_9STRA1.750e-538.46Geranylgeranyl transferase type-2 subunit alpha n=... [more]
K0SFY6_THAOC4.620e-545.28Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A7S2WBC6_9STRA6.320e-542.86Geranylgeranyl transferase type-2 subunit alpha n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.120coord: 1..56
e-value: 3.9E-9
score: 38.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig99339contigEcto-sp8_S_contig99339:374..541 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig99339.31796.1mRNA_Ecto-sp8_S_contig99339.31796.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig99339 365..541 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig99339.31796.1 ID=prot_Ecto-sp8_S_contig99339.31796.1|Name=mRNA_Ecto-sp8_S_contig99339.31796.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=56bp
MFTEPADQSVWWYHHFLLTWADDGTDSCSDSERYENVLRAEAATLGELIE
VEGRCK
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