prot_Ecto-sp8_S_contig99309.31791.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig99309.31791.1
Unique Nameprot_Ecto-sp8_S_contig99309.31791.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length40
Homology
BLAST of mRNA_Ecto-sp8_S_contig99309.31791.1 vs. uniprot
Match: A0A6H5KBE8_9PHAE (Pyruvate dehydrogenase E1 component subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBE8_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.130e-17
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0
Query:    1 MSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQ 40
            MSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQ
Sbjct:  307 MSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQ 346          
BLAST of mRNA_Ecto-sp8_S_contig99309.31791.1 vs. uniprot
Match: A0A835Z5P4_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P4_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 8.100e-14
Identity = 34/40 (85.00%), Postives = 37/40 (92.50%), Query Frame = 0
Query:    1 MSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQ 40
            MSDPGTTYRNRDEIASMRTARDPIE+VKNLLV + LA+ Q
Sbjct:  298 MSDPGTTYRNRDEIASMRTARDPIEYVKNLLVQHNLADPQ 337          
BLAST of mRNA_Ecto-sp8_S_contig99309.31791.1 vs. uniprot
Match: A0A482UR85_9ARCH (E1_dh domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UR85_9ARCH)

HSP 1 Score: 60.1 bits (144), Expect = 5.620e-11
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 MSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQ 40
            MSDPGTTYR R+E+  +R ARDPIE+VK LL DN L  A+
Sbjct:    1 MSDPGTTYRTREEVGGVRQARDPIEYVKKLLTDNNLVSAE 40          
BLAST of mRNA_Ecto-sp8_S_contig99309.31791.1 vs. uniprot
Match: A0A2P6U3S6_CHLSO (Pyruvate dehydrogenase E1 component subunit alpha n=2 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U3S6_CHLSO)

HSP 1 Score: 64.3 bits (155), Expect = 5.970e-11
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    1 MSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEA 39
            MSDPG+TYR RDEI+S+R  RDPIE V+ LLVDNGLAEA
Sbjct:  299 MSDPGSTYRTRDEISSIRQQRDPIEHVRKLLVDNGLAEA 337          
BLAST of mRNA_Ecto-sp8_S_contig99309.31791.1 vs. uniprot
Match: A0A8J2SEA3_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEA3_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.090e-10
Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 MSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDN 34
            MSDPGTTYRNRDEIA+MR  RDPIEFVKNLL+++
Sbjct:  290 MSDPGTTYRNRDEIAAMRQTRDPIEFVKNLLLEH 323          
BLAST of mRNA_Ecto-sp8_S_contig99309.31791.1 vs. uniprot
Match: A0A6U0J2F0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0J2F0_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 3.400e-10
Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    1 MSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQ 40
            MSDPGTTYRNR+EIA  R+ RDP+EFVK  ++D G A A+
Sbjct:   31 MSDPGTTYRNREEIAFTRSTRDPLEFVKKTMIDAGFATAE 70          
BLAST of mRNA_Ecto-sp8_S_contig99309.31791.1 vs. uniprot
Match: K0S2Z1_THAOC (E1_dh domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S2Z1_THAOC)

HSP 1 Score: 61.6 bits (148), Expect = 5.420e-10
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    1 MSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQ 40
            MSDPGTTYRNR+EIA  R+ RDP+EFVK  L+D G A+A+
Sbjct:  310 MSDPGTTYRNREEIALTRSTRDPLEFVKKTLIDAGFADAE 349          
BLAST of mRNA_Ecto-sp8_S_contig99309.31791.1 vs. uniprot
Match: A0A059LS40_9CHLO (Pyruvate dehydrogenase E1 component subunit alpha (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LS40_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 9.760e-10
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    1 MSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQ 40
            MSDPG+TYR RDE+A +R  RDPIE V+ LL ++GLAEAQ
Sbjct:  257 MSDPGSTYRTRDEVAGIRKTRDPIEHVRRLLTESGLAEAQ 296          
BLAST of mRNA_Ecto-sp8_S_contig99309.31791.1 vs. uniprot
Match: A0A6V2BH17_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2BH17_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.010e-9
Identity = 27/39 (69.23%), Postives = 32/39 (82.05%), Query Frame = 0
Query:    1 MSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEA 39
            MSDPGTTYRNR+EIA  R+ RDP+EFVK  L+D G A+A
Sbjct:  306 MSDPGTTYRNREEIAFTRSTRDPLEFVKKTLIDAGFADA 344          
BLAST of mRNA_Ecto-sp8_S_contig99309.31791.1 vs. uniprot
Match: B8BVN4_THAPS (Pyruvate dehydrogenase n=3 Tax=Thalassiosirales TaxID=33847 RepID=B8BVN4_THAPS)

HSP 1 Score: 60.5 bits (145), Expect = 1.360e-9
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    1 MSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQ 40
            MSDPGTTYRNR+EIA  R+ RDP+EFVK  LVD G  +A+
Sbjct:  273 MSDPGTTYRNREEIALTRSTRDPLEFVKRTLVDAGFTDAE 312          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig99309.31791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBE8_9PHAE1.130e-17100.00Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A835Z5P4_9STRA8.100e-1485.00Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A482UR85_9ARCH5.620e-1165.00E1_dh domain-containing protein n=1 Tax=archaeon T... [more]
A0A2P6U3S6_CHLSO5.970e-1176.92Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A8J2SEA3_9STRA2.090e-1082.35Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A6U0J2F0_9STRA3.400e-1065.00Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
K0S2Z1_THAOC5.420e-1067.50E1_dh domain-containing protein n=1 Tax=Thalassios... [more]
A0A059LS40_9CHLO9.760e-1067.50Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A6V2BH17_9STRA1.010e-969.23Pyruvate dehydrogenase E1 component subunit alpha ... [more]
B8BVN4_THAPS1.360e-967.50Pyruvate dehydrogenase n=3 Tax=Thalassiosirales Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001017Dehydrogenase, E1 componentPFAMPF00676E1_dhcoord: 1..38
e-value: 2.8E-7
score: 29.8
NoneNo IPR availableGENE3D3.40.50.970coord: 1..40
e-value: 2.1E-7
score: 32.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig99309contigEcto-sp8_S_contig99309:2..121 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig99309.31791.1mRNA_Ecto-sp8_S_contig99309.31791.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig99309 2..145 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig99309.31791.1 ID=prot_Ecto-sp8_S_contig99309.31791.1|Name=mRNA_Ecto-sp8_S_contig99309.31791.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=40bp
MSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001017DH_E1