prot_Ecto-sp8_S_contig9920.31777.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9920.31777.1
Unique Nameprot_Ecto-sp8_S_contig9920.31777.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length695
Homology
BLAST of mRNA_Ecto-sp8_S_contig9920.31777.1 vs. uniprot
Match: D8LHR0_ECTSI (C-type lectin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHR0_ECTSI)

HSP 1 Score: 905 bits (2339), Expect = 0.000e+0
Identity = 568/698 (81.38%), Postives = 580/698 (83.09%), Query Frame = 0
Query:    1 LQVYSSGDPTLPKWDVVGGDAYGGTGDTSGAGLDGVTFTVGGGVCDVSECQALCLSDLFGGSDGGQEASSTCDGYAALISGACGDVCPEDEEEGLGEFQQARWRCYFFQGCVRAGCAPEALCDLDIEGGGDGLDVEYHVEVRALLEAPVTALTSSAAGVGDPEEEFELAVALWLGVDQGDVAVTVKDGFEMEEXXXXXXXV----ASRRRGLQTDNSETPTTYTRYSARVQPANLTATEATGLVEIAVAGADGLDNDLQSWLWESGGSWTEVEVSTLEVDVVEEFNVLTSDSSGGHYDASEGAEEGGDVDDPLIIGGIAAGAVVVVGLVMLALCRSKKASEKSDTRAXXXXXXXXXXXXXXXAAETPRVRRNWFCGTQTTTTRIFLSTAVDPAVAAWGWGR--GLRWRALLQRVALPRRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPFGRGARSSAVXXXXXXXXXXXG-PVGSQRSNSASPPVATVDIASLSAQDSRAGGSVXXXXXXXXXXXXXXXXXXXXXXXXXXXSTFSFIANNSSLAVRDAENLETKRPSVRGPSGALASLGFARGCSLDVFEENN-AGGNPSERVEDGGSMYDGGSEAGSRYTPSRPAASGSAVGSARQAEVFGANHSTAEARIQELRDRQRVKATPVTFQASMSMPSPGGPVTPG 690
            L+VYSSG+PTLP+W VVGGDAYGGTGDTSGAGLDGVTFT GGGVC VSECQALCLSDLFGGSDGGQEASSTCDGYAALISGACGDVCPEDEEEGLGEFQQ         GCVRAGCAPEALCDLDIEGGGDGLDVEYHVEVRALLEAPVT LTSSAAGVG+PEEEFELAVALWLGVDQGDVAV VKDGFEMEE    XXX     ASRRRGLQT NSETPTTYTRYSARVQPANLTATEAT LVEIA AGADG DNDLQSWLWESGGSWTEV V TLEV+VVEE NVLTSDSSG   DASEGAEEGGD+DDPLIIGGIAAGAVVVVGLVMLALC S+KA++KSDTRAXXXXXXXXXXXXXXX   TPRVRRNWFCGTQTTTTRIFLSTAVDP+VAAWG     GLRWRALLQRVALPRR                                                         ARS   XXXXXXXXXXX  PVGSQRSNSASPPVATVD ASLSAQDS      XXXXXXXXXXXXXXXXXXXXXXXXXXX TFSF ANNSSLAVRDAENLETKRPSVRGPSGALASLGFARGCSLDVFEE N AGGNPSERVEDGGSMYDGGSEAGSRYTPSRPAASGSAVGSARQAEVFG+ +STA ARIQELRDRQRVKATPVTFQA MSMPSPGGPVTPG
Sbjct:  417 LEVYSSGNPTLPEWHVVGGDAYGGTGDTSGAGLDGVTFTAGGGVCGVSECQALCLSDLFGGSDGGQEASSTCDGYAALISGACGDVCPEDEEEGLGEFQQ---------GCVRAGCAPEALCDLDIEGGGDGLDVEYHVEVRALLEAPVTTLTSSAAGVGNPEEEFELAVALWLGVDQGDVAVRVKDGFEMEEGEEVXXXXXXXXASRRRGLQTVNSETPTTYTRYSARVQPANLTATEATELVEIAAAGADGSDNDLQSWLWESGGSWTEVSVPTLEVEVVEELNVLTSDSSGDASDASEGAEEGGDLDDPLIIGGIAAGAVVVVGLVMLALCCSRKANKKSDTRAXXXXXXXXXXXXXXXXXXTPRVRRNWFCGTQTTTTRIFLSTAVDPSVAAWGXXXXXGLRWRALLQRVALPRR---------------------------------------------------------ARSXXXXXXXXXXXXXXXXPVGSQRSNSASPPVATVDTASLSAQDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFSFAANNSSLAVRDAENLETKRPSVRGPSGALASLGFARGCSLDVFEEENTAGGNPSERVEDGGSMYDGGSEAGSRYTPSRPAASGSAVGSARQAEVFGSQYSTAGARIQELRDRQRVKATPVTFQAPMSMPSPGGPVTPG 1048          
BLAST of mRNA_Ecto-sp8_S_contig9920.31777.1 vs. uniprot
Match: A0A6H5KQV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV5_9PHAE)

HSP 1 Score: 382 bits (980), Expect = 4.370e-119
Identity = 319/520 (61.35%), Postives = 336/520 (64.62%), Query Frame = 0
Query:  215 TPTTYTRYSARVQPANLTATEATGLVEIAVAGADGLDNDLQSWLWESGGSWTEVEVSTLEVDVVEEFNVLTSDSSGGHYDASEGAEEGGDVDDPLIIGGIAAGAVVVVGLVMLALCRSKKASEKS---------------DTRAXXXXXXXXXXXXXXXAAETPR-------VRRN-----------WFCGTQTTTTRIFLSTAVDPAVAAWGWGRGLRWRALLQRVALPRRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------GEPFGRGARSSAVXXXXXXXXXXX-GPVGSQRSNSASPPVATVDIASLSAQDSRAGGSVXXXXXXXXXXXXXXXXXXXXXXXXXXXSTFSFIANNSSLAVRDAENLETKRPSVRGPSGALASLGFARGCSLDVFEENN-AGGNPSERVEDGGSMYDGGSEAGSRYTPSRPAASGSAVGSARQAEVFGANHSTAEARIQELRDRQRVKATPVTFQASMSMPSPGGPVTPGESY 693
            TPT YTRYSARVQPANLT TEAT LVE A AGADG DNDLQSWLWESGGSW+EV V+TLEV+VVEEFNV TS SSG   DASEG+EEGGDVDDPLIIGGI AGAV+VVGLVMLALCRSKKAS+KS               D R           XXXXX             V RN              G ++         AV  A AA G      +  +   V     DAXXXXXXXXXXXXXXXX              XXXXXXXXXXXXXXXXXX      GEPFGRGA SS  XXXXXXXXXX  GPVGSQRS SASPPVATVD  SLSAQDS A GSV                           ST SF ANNSSLAVRDA +LETKRP VRGPSGALA+LGFARGCS DVFEE+N AGGNPSE  ED               TPSR AASGSA+GSARQAEVFG+ HSTAEARIQELRDRQ V+ATPVTF ASMSMPSPGGPVTPG  +
Sbjct:    2 TPTNYTRYSARVQPANLTVTEATELVETAAAGADGSDNDLQSWLWESGGSWSEVSVTTLEVEVVEEFNVPTSASSGVVSDASEGSEEGGDVDDPLIIGGIVAGAVLVVGLVMLALCRSKKASKKSRGSQAASCGRRFDNGDARGNPSSGKDSKQXXXXXXXXXXXXXXXEELVLRNADDDKHTLEYSGGSGGRSVGKGAEAGAAVTGAAAAGGASEARVFVPVDLGVEEGGADAXXXXXXXXXXXXXXXXSEFGSGPPAAIAHQXXXXXXXXXXXXXXXXXXXXXXPGGEPFGRGAHSSXXXXXXXXXXXXGSGPVGSQRSISASPPVATVDTTSLSAQDSSAEGSVITGAAAGRGALVGPSGGPGQHHSRRSSSTCSFAANNSSLAVRDAVDLETKRPRVRGPSGALATLGFARGCSWDVFEEDNTAGGNPSEGGEDXXXXXXXXXXXXXXXTPSRRAASGSAIGSARQAEVFGSQHSTAEARIQELRDRQGVEATPVTFPASMSMPSPGGPVTPGTDW 521          
BLAST of mRNA_Ecto-sp8_S_contig9920.31777.1 vs. uniprot
Match: A0A6H5KPR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPR5_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 1.640e-62
Identity = 105/108 (97.22%), Postives = 106/108 (98.15%), Query Frame = 0
Query:    1 LQVYSSGDPTLPKWDVVGGDAYGGTGDTSGAGLDGVTFTVGGGVCDVSECQALCLSDLFGGSDGGQEASSTCDGYAALISGACGDVCPEDEEEGLGEFQQARWRCYFF 108
            L+VYSSGDPTLP WDVVGGDAYGGTGDTSGAGLDGVTFTVGGGVCDVSECQALCLSDLFGGSDGGQEASSTCDGYAALISGACGDVCPEDEEEGLGEFQQARWRCY F
Sbjct:  309 LEVYSSGDPTLPTWDVVGGDAYGGTGDTSGAGLDGVTFTVGGGVCDVSECQALCLSDLFGGSDGGQEASSTCDGYAALISGACGDVCPEDEEEGLGEFQQARWRCYLF 416          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9920.31777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHR0_ECTSI0.000e+081.38C-type lectin domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KQV5_9PHAE4.370e-11961.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPR5_9PHAE1.640e-6297.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 191..211
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..308
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 330..694
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 309..329

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9920contigEcto-sp8_S_contig9920:222..6559 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9920.31777.1mRNA_Ecto-sp8_S_contig9920.31777.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9920 222..6559 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9920.31777.1 ID=prot_Ecto-sp8_S_contig9920.31777.1|Name=mRNA_Ecto-sp8_S_contig9920.31777.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=695bp
LQVYSSGDPTLPKWDVVGGDAYGGTGDTSGAGLDGVTFTVGGGVCDVSEC
QALCLSDLFGGSDGGQEASSTCDGYAALISGACGDVCPEDEEEGLGEFQQ
ARWRCYFFQGCVRAGCAPEALCDLDIEGGGDGLDVEYHVEVRALLEAPVT
ALTSSAAGVGDPEEEFELAVALWLGVDQGDVAVTVKDGFEMEEEEEEEEE
VASRRRGLQTDNSETPTTYTRYSARVQPANLTATEATGLVEIAVAGADGL
DNDLQSWLWESGGSWTEVEVSTLEVDVVEEFNVLTSDSSGGHYDASEGAE
EGGDVDDPLIIGGIAAGAVVVVGLVMLALCRSKKASEKSDTRARARTRNS
SRSSGSSSAAETPRVRRNWFCGTQTTTTRIFLSTAVDPAVAAWGWGRGLR
WRALLQRVALPRRDAAAAAAAAAAASEFGSGPPAAVAHQQRQQQRQEKHR
RSRGEDSSSSPPGGEPFGRGARSSAVAAAAGSGSGGSGPVGSQRSNSASP
PVATVDIASLSAQDSRAGGSVTTGAAAGGGALGGPSGGPGQHHSRRSSST
FSFIANNSSLAVRDAENLETKRPSVRGPSGALASLGFARGCSLDVFEENN
AGGNPSERVEDGGSMYDGGSEAGSRYTPSRPAASGSAVGSARQAEVFGAN
HSTAEARIQELRDRQRVKATPVTFQASMSMPSPGGPVTPGESYK*
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