prot_Ecto-sp8_S_contig99092.31759.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig99092.31759.1
Unique Nameprot_Ecto-sp8_S_contig99092.31759.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length52
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig99092.31759.1 vs. uniprot
Match: D8LD26_ECTSI (Flagellar outer dynein arm-docking complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD26_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 5.120e-24
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0 
Query:    1 REAIKSIRHGNELLKSDLAWEARESRFITNPSAAAEIQRLQDQADIYAKKTE 52
            +EAIKSIRHGNELLKSDLAWEARESRFITNPSAAAEIQRLQDQADIYAKKTE
Sbjct:   24 KEAIKSIRHGNELLKSDLAWEARESRFITNPSAAAEIQRLQDQADIYAKKTE 75
[Close]
BLAST of mRNA_Ecto-sp8_S_contig99092.31759.1 vs. uniprot
Match: A0A835YL73_9STRA (Flagellar outer dynein arm-docking complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL73_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.420e-10
Identity = 30/49 (61.22%), Postives = 40/49 (81.63%), Query Frame = 0 
Query:    4 IKSIRHGNELLKSDLAWEARESRFITNPSAAAEIQRLQDQADIYAKKTE 52
            I++++  NE +K+DLA E+RESRF+TNP+A   I RLQDQAD+YAKK E
Sbjct:   21 IETVQQSNEQMKTDLARESRESRFVTNPAAMKSIVRLQDQADLYAKKIE 69
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig99092.31759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD26_ECTSI5.120e-2498.08Flagellar outer dynein arm-docking complex n=1 Tax... [more]
A0A835YL73_9STRA1.420e-1061.22Flagellar outer dynein arm-docking complex n=1 Tax... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig99092contigEcto-sp8_S_contig99092:35..190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig99092.31759.1mRNA_Ecto-sp8_S_contig99092.31759.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig99092 35..190 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig99092.31759.1 ID=prot_Ecto-sp8_S_contig99092.31759.1|Name=mRNA_Ecto-sp8_S_contig99092.31759.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=52bp
REAIKSIRHGNELLKSDLAWEARESRFITNPSAAAEIQRLQDQADIYAKK
TE
back to top