prot_Ecto-sp8_S_contig99081.31756.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig99081.31756.1
Unique Name	prot_Ecto-sp8_S_contig99081.31756.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	85

Homology

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BLAST of mRNA_Ecto-sp8_S_contig99081.31756.1 vs. uniprot
Match: D7FJ11_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ11_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 5.270e-49
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0

Query:    1 ESCYLKARVHHATGNLSEAKLLYNEACHLWPQFPLAQYGMAQMLVNEGSIDPAMKALNAVLAEVPDNQEALVLLGVLCAKNKDRL 85
            ESCYLKARVHHATGNLSEAKLLYNEACHLWPQFPLAQYGMAQMLVNEGSIDPAMKALNAVLAEVPDNQEALVLLGVLCAKNKDRL
Sbjct:  401 ESCYLKARVHHATGNLSEAKLLYNEACHLWPQFPLAQYGMAQMLVNEGSIDPAMKALNAVLAEVPDNQEALVLLGVLCAKNKDRL 485

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BLAST of mRNA_Ecto-sp8_S_contig99081.31756.1 vs. uniprot
Match: A0A484BKT0_DRONA (Uncharacterized protein n=2 Tax=Drosophila navojoa TaxID=7232 RepID=A0A484BKT0_DRONA)

HSP 1 Score: 58.9 bits (141), Expect = 3.300e-8
Identity = 30/83 (36.14%), Postives = 48/83 (57.83%), Query Frame = 0

Query:    1 ESCYLKARVHHATGNLSEAKLLYNEACHLWPQFPLAQYGMAQMLVNEGSIDPAMKALNAVLAEVPDNQEALVLLGVLCAKNKD 83
            ++CY  AR  HAT +   A   Y +A    P FP A  G+AQ+ V  G +D A  +L  +L  +P+N+EAL +LG++  ++ +
Sbjct:  295 QNCYNIARSFHATKDYDRAFDFYGKAVKCQPNFPPAHLGVAQIYVRRGQLDLAELSLRTLLKMMPENKEALCMLGLIYTQSNE 377

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BLAST of mRNA_Ecto-sp8_S_contig99081.31756.1 vs. uniprot
Match: UPI0007E776CD (RNA polymerase-associated protein CTR9 homolog n=1 Tax=Drosophila biarmipes TaxID=125945 RepID=UPI0007E776CD)

HSP 1 Score: 50.8 bits (120), Expect = 2.210e-5
Identity = 31/73 (42.47%), Postives = 36/73 (49.32%), Query Frame = 0

Query:    4 YLKARVHHATGNLSEAKLLYNEACHLWPQ-FPLAQYGMAQMLVNEGSIDPAMKALNAVLAEVPDNQEALVLLG 75
            Y  AR HHATG    A   Y  A  L P+ F L Q G AQM +  G  + A   L A L  +P+   AL LLG
Sbjct:  275 YQVARSHHATGEFEIASTYYKNALRLAPETFVLPQMGKAQMYLRVGEFEKAKICLEAFLQSLPNEPNALQLLG 347

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig99081.31756.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig99081.31756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FJ11_ECTSI	5.270e-49	100.00	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A484BKT0_DRONA	3.300e-8	36.14	Uncharacterized protein n=2 Tax=Drosophila navojoa...	[more]
UPI0007E776CD	2.210e-5	42.47	RNA polymerase-associated protein CTR9 homolog n=1...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14559	TPR_19	coord: 13..70 e-value: 2.7E-7 score: 31.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 1..84 e-value: 8.7E-13 score: 50.1
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 3..83
IPR031101	RNA polymerase-associated protein Ctr9	PANTHER	PTHR14027	TPR REPEAT NUCLEAR PHOSPHOPROTEIN/CTR9	coord: 1..83
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 1..67 score: 10.776

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig99081	contig	Ecto-sp8_S_contig99081:127..508 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig99081.31756.1	mRNA_Ecto-sp8_S_contig99081.31756.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig99081 126..508 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig99081.31756.1 ID=prot_Ecto-sp8_S_contig99081.31756.1|Name=mRNA_Ecto-sp8_S_contig99081.31756.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=85bp
ESCYLKARVHHATGNLSEAKLLYNEACHLWPQFPLAQYGMAQMLVNEGSI
DPAMKALNAVLAEVPDNQEALVLLGVLCAKNKDRL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR031101	Ctr9
IPR013026	TPR-contain_dom