prot_Ecto-sp8_S_contig98874.31723.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig98874.31723.1
Unique Nameprot_Ecto-sp8_S_contig98874.31723.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length95
Homology
BLAST of mRNA_Ecto-sp8_S_contig98874.31723.1 vs. uniprot
Match: D7G854_ECTSI (Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G854_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 8.490e-58
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0
Query:    1 TPTAARAPVQPAVWNTVSGCLEPLPDPSTGMLKWYSCGPTVYDSAHLGHARTYVSLDVIRRVLTDYFRFDVTYALGITDVDDKIIARARENGLRE 95
            TPTAARAPVQPAVWNTV+GCLEPLPDPSTGMLKWYSCGPTVYDSAHLGHARTYVSLDVIRRVLTDYFRFDVTYALGITDVDDKIIARARENGLRE
Sbjct:   35 TPTAARAPVQPAVWNTVNGCLEPLPDPSTGMLKWYSCGPTVYDSAHLGHARTYVSLDVIRRVLTDYFRFDVTYALGITDVDDKIIARARENGLRE 129          
BLAST of mRNA_Ecto-sp8_S_contig98874.31723.1 vs. uniprot
Match: A0A836CJU0_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU0_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.400e-31
Identity = 57/82 (69.51%), Postives = 70/82 (85.37%), Query Frame = 0
Query:   11 PAVWNTVSGCLEPLPDPSTGMLKWYSCGPTVYDSAHLGHARTYVSLDVIRRVLTDYFRFDVTYALGITDVDDKIIARARENG 92
            P +  +++G LE LP PS G LKWY+CGPTVYD+AHLGHARTYVSLDV+RR+LTD+F + + YA+G+TDVDDKIIARARE G
Sbjct:  121 PRLHTSLTGDLEQLPPPSRGPLKWYNCGPTVYDAAHLGHARTYVSLDVLRRLLTDHFGYRILYAMGVTDVDDKIIARAREGG 202          
BLAST of mRNA_Ecto-sp8_S_contig98874.31723.1 vs. uniprot
Match: A0A7S3YL56_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YL56_HETAK)

HSP 1 Score: 108 bits (270), Expect = 7.430e-29
Identity = 53/82 (64.63%), Postives = 63/82 (76.83%), Query Frame = 0
Query:   15 NTVSGCLEPLPDPSTG---MLKWYSCGPTVYDSAHLGHARTYVSLDVIRRVLTDYFRFDVTYALGITDVDDKIIARARENGL 93
            NT+SG LE L   S G   +LKWYSCGPTVYDSAHLGHARTYV  D IRR+L ++F+++V Y LG+TD+DDKII R  E GL
Sbjct:    3 NTLSGRLEELAIDSEGGQKVLKWYSCGPTVYDSAHLGHARTYVCFDTIRRILINHFQYEVFYCLGMTDIDDKIIRRGWERGL 84          
BLAST of mRNA_Ecto-sp8_S_contig98874.31723.1 vs. uniprot
Match: A0A183KK41_9TREM (tRNA-synt_1e domain-containing protein n=2 Tax=Schistosoma TaxID=6181 RepID=A0A183KK41_9TREM)

HSP 1 Score: 105 bits (262), Expect = 2.890e-27
Identity = 47/62 (75.81%), Postives = 53/62 (85.48%), Query Frame = 0
Query:   32 LKWYSCGPTVYDSAHLGHARTYVSLDVIRRVLTDYFRFDVTYALGITDVDDKIIARARENGL 93
            +KWY+CGPTVYD +HLGHARTYV+ DVIRRVL DYF F VTY L ITD+DDKII RAR+N L
Sbjct:   45 VKWYTCGPTVYDVSHLGHARTYVAFDVIRRVLVDYFNFKVTYVLNITDIDDKIIKRARQNHL 106          
BLAST of mRNA_Ecto-sp8_S_contig98874.31723.1 vs. uniprot
Match: A0A4Y7TXF8_9AGAR (Cysteine--tRNA ligase (Fragment) n=3 Tax=Coprinellus micaceus TaxID=71717 RepID=A0A4Y7TXF8_9AGAR)

HSP 1 Score: 111 bits (277), Expect = 1.930e-26
Identity = 49/80 (61.25%), Postives = 62/80 (77.50%), Query Frame = 0
Query:   11 PAVWNTVSGCLEPLPDPSTGMLKWYSCGPTVYDSAHLGHARTYVSLDVIRRVLTDYFRFDVTYALGITDVDDKIIARARE 90
            P ++N+++    PLPD S   LKWYSCGPTVYDS+HLGHAR YV+ DVIRRVL DYF +++ Y + +TD+DDKII R RE
Sbjct:   40 PRIFNSLTKSKTPLPDTSGEPLKWYSCGPTVYDSSHLGHARNYVAQDVIRRVLADYFGYNIHYVMNVTDIDDKIIGRTRE 119          
BLAST of mRNA_Ecto-sp8_S_contig98874.31723.1 vs. uniprot
Match: A0A212DG13_CEREH (CARS (Fragment) n=1 Tax=Cervus elaphus hippelaphus TaxID=46360 RepID=A0A212DG13_CEREH)

HSP 1 Score: 102 bits (255), Expect = 2.180e-26
Identity = 43/62 (69.35%), Postives = 54/62 (87.10%), Query Frame = 0
Query:   34 WYSCGPTVYDSAHLGHARTYVSLDVIRRVLTDYFRFDVTYALGITDVDDKIIARARENGLRE 95
            WY CGPTVYD++H+GHAR+Y+SLD++RRVL DYF+FDV Y + ITD+DDKII RAR+N L E
Sbjct:   33 WYCCGPTVYDASHMGHARSYISLDILRRVLRDYFKFDVFYCMNITDIDDKIIKRARQNHLFE 94          
BLAST of mRNA_Ecto-sp8_S_contig98874.31723.1 vs. uniprot
Match: A0A067CIQ3_SAPPC (Cysteine--tRNA ligase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CIQ3_SAPPC)

HSP 1 Score: 110 bits (276), Expect = 2.360e-26
Identity = 51/78 (65.38%), Postives = 62/78 (79.49%), Query Frame = 0
Query:   15 NTVSGCLEPLPDPSTGMLKWYSCGPTVYDSAHLGHARTYVSLDVIRRVLTDYFRFDVTYALGITDVDDKIIARARENG 92
            N++SG +E LP  S+G LKWY CGPTVYDSAHLGHAR+YVS D++RRVLT YFR D+   +G+TDVDDKIIA +   G
Sbjct:   28 NSLSGKVEALPVASSGPLKWYVCGPTVYDSAHLGHARSYVSQDILRRVLTGYFRHDINLVMGMTDVDDKIIATSLREG 105          
BLAST of mRNA_Ecto-sp8_S_contig98874.31723.1 vs. uniprot
Match: A0A672I0W7_SALFA (tRNA-synt_1e domain-containing protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672I0W7_SALFA)

HSP 1 Score: 104 bits (260), Expect = 2.830e-26
Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = 0
Query:    2 PTAARAPVQPAVWNTVSGCLEPLPDPSTGMLKWYSCGPTVYDSAHLGHARTYVSLDVIRRVLTDYFRFDVTYALGITDVDDKIIARARENGLRE 95
            P    A  Q  ++N+++   EP        + WY CGPTVYD++H+GHAR+Y+S D++RR+L DYF++DV Y + ITD+DDKII RAR+N L E
Sbjct:   66 PPEGTAGPQLRLYNSLTRTKEPFVPQRGNKVTWYCCGPTVYDASHMGHARSYISFDILRRILRDYFKYDVLYCMNITDIDDKIIKRARQNFLLE 159          
BLAST of mRNA_Ecto-sp8_S_contig98874.31723.1 vs. uniprot
Match: A0A7S0XNG5_9STRA (Hypothetical protein (Fragment) n=3 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S0XNG5_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.380e-26
Identity = 45/79 (56.96%), Postives = 61/79 (77.22%), Query Frame = 0
Query:   15 NTVSGCLEPLPDPSTGMLKWYSCGPTVYDSAHLGHARTYVSLDVIRRVLTDYFRFDVTYALGITDVDDKIIARARENGL 93
            NT++G  EP        ++WY+CGPTVYDS+H+GHARTY+S D++RRV+TDYF ++V Y +  TD+DDKII RAR+N L
Sbjct:   43 NTLTGKKEPFVPMQARHVRWYTCGPTVYDSSHVGHARTYLSFDIMRRVMTDYFHYNVLYQINTTDIDDKIILRARQNEL 121          
BLAST of mRNA_Ecto-sp8_S_contig98874.31723.1 vs. uniprot
Match: A0A7R9VKJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VKJ4_9STRA)

HSP 1 Score: 103 bits (256), Expect = 4.090e-26
Identity = 44/79 (55.70%), Postives = 61/79 (77.22%), Query Frame = 0
Query:   15 NTVSGCLEPLPDPSTGMLKWYSCGPTVYDSAHLGHARTYVSLDVIRRVLTDYFRFDVTYALGITDVDDKIIARARENGL 93
            NT++G  EP    S   +KWY+CGPTVYDS+H+GHARTY+S D++RR+ +DYF ++V Y +  TD+DDKII RAR++ L
Sbjct:   28 NTLTGKKEPFVPASARHVKWYTCGPTVYDSSHVGHARTYLSFDIMRRIFSDYFMYNVLYQINTTDIDDKIILRARQDFL 106          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig98874.31723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G854_ECTSI8.490e-5898.95Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A836CJU0_9STRA1.400e-3169.51Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S3YL56_HETAK7.430e-2964.63Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A183KK41_9TREM2.890e-2775.81tRNA-synt_1e domain-containing protein n=2 Tax=Sch... [more]
A0A4Y7TXF8_9AGAR1.930e-2661.25Cysteine--tRNA ligase (Fragment) n=3 Tax=Coprinell... [more]
A0A212DG13_CEREH2.180e-2669.35CARS (Fragment) n=1 Tax=Cervus elaphus hippelaphus... [more]
A0A067CIQ3_SAPPC2.360e-2665.38Cysteine--tRNA ligase n=2 Tax=Saprolegnia TaxID=47... [more]
A0A672I0W7_SALFA2.830e-2648.94tRNA-synt_1e domain-containing protein n=1 Tax=Sal... [more]
A0A7S0XNG5_9STRA3.380e-2656.96Hypothetical protein (Fragment) n=3 Tax=Skeletonem... [more]
A0A7R9VKJ4_9STRA4.090e-2655.70Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032678tRNA synthetases class I, catalytic domainPFAMPF01406tRNA-synt_1ecoord: 30..92
e-value: 4.0E-24
score: 85.5
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 1..95
e-value: 1.4E-27
score: 98.4
NoneNo IPR availablePANTHERPTHR10890:SF3CYSTEINE--TRNA LIGASE, CYTOPLASMICcoord: 10..94
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 22..93
IPR024909Cysteinyl-tRNA synthetase/mycothiol ligasePANTHERPTHR10890CYSTEINYL-TRNA SYNTHETASEcoord: 10..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig98874contigEcto-sp8_S_contig98874:26..310 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig98874.31723.1mRNA_Ecto-sp8_S_contig98874.31723.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig98874 26..310 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig98874.31723.1 ID=prot_Ecto-sp8_S_contig98874.31723.1|Name=mRNA_Ecto-sp8_S_contig98874.31723.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=95bp
TPTAARAPVQPAVWNTVSGCLEPLPDPSTGMLKWYSCGPTVYDSAHLGHA
RTYVSLDVIRRVLTDYFRFDVTYALGITDVDDKIIARARENGLRE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032678tRNA-synt_1_cat_dom
IPR014729Rossmann-like_a/b/a_fold
IPR024909Cys-tRNA/MSH_ligase