prot_Ecto-sp8_S_contig9871.31701.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9871.31701.1
Unique Nameprot_Ecto-sp8_S_contig9871.31701.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length98
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9871.31701.1 vs. uniprot
Match: D7FWZ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWZ2_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 4.610e-24
Identity = 89/98 (90.82%), Postives = 90/98 (91.84%), Query Frame = 0 
Query:    1 MNINVIGGGHGLGSGLSAGDKSAAGDSTISXXXXXXXXXXXXXXXXXXXXSNGGLPSGRSRSPGFDVDKPTTSXXXXXXXXXXXXXXXXFLAGATVVT 98
            MNINVIGGGHGLGSGLSAGDKSAAGDST+SXXXXXXXXXXXXXXX     SNGGLPSGRSRSPGFDVDKPTT XXXXXXXXXXXXXXXX  AGATVVT
Sbjct:   20 MNINVIGGGHGLGSGLSAGDKSAAGDSTVSXXXXXXXXXXXXXXXMATSSSNGGLPSGRSRSPGFDVDKPTTXXXXXXXXXXXXXXXXXXXAGATVVT 117
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9871.31701.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWZ2_ECTSI4.610e-2490.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9871contigEcto-sp8_S_contig9871:3133..4215 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9871.31701.1mRNA_Ecto-sp8_S_contig9871.31701.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9871 3129..4215 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9871.31701.1 ID=prot_Ecto-sp8_S_contig9871.31701.1|Name=mRNA_Ecto-sp8_S_contig9871.31701.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=98bp
MNINVIGGGHGLGSGLSAGDKSAAGDSTISSSPPVAAAAFGSSAAMATSS
SNGGLPSGRSRSPGFDVDKPTTSSSSPGETTASSAAAAAFLAGATVVT
back to top