prot_Ecto-sp8_S_contig98704.31700.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig98704.31700.1
Unique Name	prot_Ecto-sp8_S_contig98704.31700.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	95

Homology

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BLAST of mRNA_Ecto-sp8_S_contig98704.31700.1 vs. uniprot
Match: D7FSB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSB1_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 1.090e-50
Identity = 83/88 (94.32%), Postives = 84/88 (95.45%), Query Frame = 0

Query:    8 GSNDAGIFDGSTASFCLVMLILNMLAKLAAVYCFLRFYKEMEAGGIRPHERLSAPEKQGGRQSAGGRGAYDMAPMSTHEERAPVGSPD 95
            GSNDAGIFDGSTASFCLVMLILNMLAKLAAVYCFLRFYKEME+G IRP ERL AP KQGGRQSAGGRGAYDMAPMSTHEERAPVGSPD
Sbjct:   90 GSNDAGIFDGSTASFCLVMLILNMLAKLAAVYCFLRFYKEMESGAIRPQERLGAPAKQGGRQSAGGRGAYDMAPMSTHEERAPVGSPD 177

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig98704.31700.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig98704.31700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FSB1_ECTSI	1.090e-50	94.32	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 19..42
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..18
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 43..95
None	No IPR available	TMHMM	TMhelix		coord: 20..42

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig98704	contig	Ecto-sp8_S_contig98704:247..531 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig98704.31700.1	mRNA_Ecto-sp8_S_contig98704.31700.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig98704 247..531 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig98704.31700.1 ID=prot_Ecto-sp8_S_contig98704.31700.1|Name=mRNA_Ecto-sp8_S_contig98704.31700.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=95bp
MNVSSFSGSNDAGIFDGSTASFCLVMLILNMLAKLAAVYCFLRFYKEMEA
GGIRPHERLSAPEKQGGRQSAGGRGAYDMAPMSTHEERAPVGSPD