prot_Ecto-sp8_S_contig9863.31685.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9863.31685.1
Unique Nameprot_Ecto-sp8_S_contig9863.31685.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length42
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9863.31685.1 vs. uniprot
Match: D8LR30_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR30_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 1.580e-23
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 0 
Query:    1 QAGWNCLFYATYHNESNIVHYLLMHGADTDHKDKRGMTAIDW 42
            +AGW CLFYATYHNESNIVHYLLMHGADTDHKDKRGMTAIDW
Sbjct:   92 KAGWTCLFYATYHNESNIVHYLLMHGADTDHKDKRGMTAIDW 133
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9863.31685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LR30_ECTSI1.580e-2395.24Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..42
e-value: 2.2E-9
score: 39.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..42
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 3..34
e-value: 4.0E-4
score: 20.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 2..34
score: 9.591
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 2..42
score: 11.639

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9863contigEcto-sp8_S_contig9863:72..197 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9863.31685.1mRNA_Ecto-sp8_S_contig9863.31685.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9863 72..197 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9863.31685.1 ID=prot_Ecto-sp8_S_contig9863.31685.1|Name=mRNA_Ecto-sp8_S_contig9863.31685.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=42bp
QAGWNCLFYATYHNESNIVHYLLMHGADTDHKDKRGMTAIDW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom