prot_Ecto-sp8_S_contig98627.31684.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig98627.31684.1
Unique Nameprot_Ecto-sp8_S_contig98627.31684.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length174
Homology
BLAST of mRNA_Ecto-sp8_S_contig98627.31684.1 vs. uniprot
Match: UPI001C657F1A (hypothetical protein n=1 Tax=Shewanella sp. FJAT-53749 TaxID=2864206 RepID=UPI001C657F1A)

HSP 1 Score: 108 bits (271), Expect = 1.890e-26
Identity = 59/171 (34.50%), Postives = 95/171 (55.56%), Query Frame = 0
Query:    3 VYTLQPGETRNIQTPSKFLSILELDGLLSVASSSYGLKPLRVKPGWQLELDGIPEVAIENVDAQAVTVELQDAGVRISGGGGGSVSITNKPVIKRIEEPLDFQANVTFNGGAVELISSNNLNTLADKVCAINAMTQVAAGNPTRQTLIIQNQSDTH-GVRVGGNQVSGNRG 172
            + TLQ GETR   T  ++ +++       +++S+ GL   ++K GW ++L+  P V IEN  +  +T+ELQ + ++I+  GG SVSI+NKP+I+RIEE +   A  T   G V ++   ++    D         QV A NP R++ +IQ  S T   +R+G N +   RG
Sbjct:    2 IITLQAGETRLFPTAGRYFNVIAASDTFELSNSALGLAANQIKAGWIVDLEKYPSVDIENKHSYPITLELQSSQLKINAAGGESVSISNKPIIQRIEESIRVDAQATVENGTVHVVLGASVADAQDITITAGQKVQVLAANPDRKSALIQVLSATRTDLRIGSNAIQAGRG 172          
BLAST of mRNA_Ecto-sp8_S_contig98627.31684.1 vs. uniprot
Match: UPI001C09CC4F (hypothetical protein n=1 Tax=Aestuariibacter sp. A3R04 TaxID=2841571 RepID=UPI001C09CC4F)

HSP 1 Score: 85.9 bits (211), Expect = 1.470e-17
Identity = 62/176 (35.23%), Postives = 90/176 (51.14%), Query Frame = 0
Query:    1 MAVYTLQPGETRNIQTPSKFLSILELDGLLSVASSSYGLKPLRVKPGWQLELDGIPEVAIENVDAQAVTVELQDAGVRISGGGGGSVSITNKPVIKRIEEPLDFQANVTFNGGAVELISSNNLNTLADKVCAINAMTQVA-AGNPTRQTLIIQNQSD-THGVRVGGNQVSGNRGFV 174
            M + T+  G+ R IQTP+K+LS++  +G   V + + G   +  K G Q  LD I EV   N     + +E + A ++I G G GSVSI NKP I+RIEE +   A  T   G V   S ++L    D         ++  A    R+T+I+Q  S  T  +R+G N V+  RG V
Sbjct:    1 MPIVTIAAGKERVIQTPAKYLSVIGANGQFVVNAPALG--NVIGKIGRQYVLDNITEVLFINDSGDPIEIEYEIANIQIFGSGSGSVSIENKPTIRRIEEAIQVNAAATVENGTVTAQSHDSLIDFDDITIPPGTKIKIIDAEAVNRRTVIMQVISSVTTRLRIGSNTVTAGRGLV 174          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig98627.31684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI001C657F1A1.890e-2634.50hypothetical protein n=1 Tax=Shewanella sp. FJAT-5... [more]
UPI001C09CC4F1.470e-1735.23hypothetical protein n=1 Tax=Aestuariibacter sp. A... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig98627contigEcto-sp8_S_contig98627:3..524 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig98627.31684.1mRNA_Ecto-sp8_S_contig98627.31684.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig98627 3..524 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig98627.31684.1 ID=prot_Ecto-sp8_S_contig98627.31684.1|Name=mRNA_Ecto-sp8_S_contig98627.31684.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=174bp
MAVYTLQPGETRNIQTPSKFLSILELDGLLSVASSSYGLKPLRVKPGWQL
ELDGIPEVAIENVDAQAVTVELQDAGVRISGGGGGSVSITNKPVIKRIEE
PLDFQANVTFNGGAVELISSNNLNTLADKVCAINAMTQVAAGNPTRQTLI
IQNQSDTHGVRVGGNQVSGNRGFV
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