prot_Ecto-sp8_S_contig98602.31681.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig98602.31681.1
Unique Nameprot_Ecto-sp8_S_contig98602.31681.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length113
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig98602.31681.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00313CABNDNGRPTcoord: 28..36
score: 64.5
coord: 46..55
score: 48.54
coord: 16..27
score: 47.97
coord: 37..45
score: 50.95
IPR001343RTX calcium-binding nonapeptide repeatPFAMPF00353HemolysinCabindcoord: 18..52
e-value: 1.8E-9
score: 37.4
IPR011049Serralysin-like metalloprotease, C-terminalGENE3D2.150.10.10coord: 1..113
e-value: 1.1E-19
score: 72.8
IPR011049Serralysin-like metalloprotease, C-terminalSUPERFAMILY51120beta-Rollcoord: 1..104
IPR018511Hemolysin-type calcium-binding conserved sitePROSITEPS00330HEMOLYSIN_CALCIUMcoord: 24..42
IPR018511Hemolysin-type calcium-binding conserved sitePROSITEPS00330HEMOLYSIN_CALCIUMcoord: 33..51
IPR018511Hemolysin-type calcium-binding conserved sitePROSITEPS00330HEMOLYSIN_CALCIUMcoord: 15..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig98602contigEcto-sp8_S_contig98602:104..442 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig98602.31681.1mRNA_Ecto-sp8_S_contig98602.31681.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig98602 104..442 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig98602.31681.1 ID=prot_Ecto-sp8_S_contig98602.31681.1|Name=mRNA_Ecto-sp8_S_contig98602.31681.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=113bp
GTTGADTLTGGYFGDTLDGGDGDDSLSGGAGNDTLTGGAGSDVIDGGTGQ
DIARFAGNQSAYTLTELGNDSIQVVSASGTDILLNVEQAVFDDATLSLVA
QTLTASGAGDTLT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001343Hemolysn_Ca-bd
IPR011049Serralysin-like_metalloprot_C
IPR018511Hemolysin-typ_Ca-bd_CS