prot_Ecto-sp8_S_contig98516.31671.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig98516.31671.1
Unique Nameprot_Ecto-sp8_S_contig98516.31671.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length187
Homology
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BLAST of mRNA_Ecto-sp8_S_contig98516.31671.1 vs. uniprot
Match: A0A7X2FV26_9PROT (VWA domain-containing protein n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2FV26_9PROT)

HSP 1 Score: 258 bits (659), Expect = 1.870e-81
Identity = 169/187 (90.37%), Postives = 173/187 (92.51%), Query Frame = 0 
Query:    1 WYAAWTGEVEPLSEAAAEVRASHEADIAEKLEAIRTFSREQASRGGAGATLAEMLDRATQMARTDDAYLVDGKPVLTFWGFVPEDPAHAPAVFNPVAALPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLKACEPLPPQIVEREMPNDDAATALEDLKKRGEELDLLLGDLSNKREEQL 187
            WYAAWTGEVEPLS AA EVRASHEA IAEKLEAIR F+REQA RGGAG+TLAEMLDRATQMARTDDAYLV GKPVLTFWGFVPEDPAHAPAVFNPVAALPA  XXXXXXXXXXXXXXXXXXXXXXXXXXX     LTLKACEPLPPQIVERE+PNDDAATAL+DLKKRGEELDLLLGDLS KREEQL
Sbjct:   27 WYAAWTGEVEPLSGAAPEVRASHEAAIAEKLEAIRNFAREQADRGGAGSTLAEMLDRATQMARTDDAYLVGGKPVLTFWGFVPEDPAHAPAVFNPVAALPATPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLAFLTLKACEPLPPQIVEREVPNDDAATALDDLKKRGEELDLLLGDLSKKREEQL 213
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BLAST of mRNA_Ecto-sp8_S_contig98516.31671.1 vs. uniprot
Match: A0A154W6Y1_9PROT (VWFA domain-containing protein n=2 Tax=Oceanibaculum pacificum TaxID=580166 RepID=A0A154W6Y1_9PROT)

HSP 1 Score: 140 bits (352), Expect = 6.580e-36
Identity = 69/99 (69.70%), Postives = 79/99 (79.80%), Query Frame = 0 
Query:    1 WYAAWTGEVEPLSEAAAEVRASHEADIAEKLEAIRTFSREQASRGGAGATLAEMLDRATQMARTDDAYLVDGKPVLTFWGFVPEDPAHAPAVFNPVAAL 99
            WYAAW G V PLS+   E RA HEADIA KL  IR  + EQA+RGG+GATLAEML+RATQ+A T DAYLV+G+PVLTFWGF PEDPAHAPA F P+ A+
Sbjct:   42 WYAAWPGAVRPLSDLPPEERAPHEADIARKLADIRVLAAEQAARGGSGATLAEMLERATQLADTSDAYLVEGRPVLTFWGFAPEDPAHAPASFTPIGAV 140
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BLAST of mRNA_Ecto-sp8_S_contig98516.31671.1 vs. uniprot
Match: E1VGZ6_9GAMM (Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 TaxID=83406 RepID=E1VGZ6_9GAMM)

HSP 1 Score: 58.2 bits (139), Expect = 1.240e-6
Identity = 43/116 (37.07%), Postives = 55/116 (47.41%), Query Frame = 0 
Query:    1 WYAAWTGEVEPLSEAAAEVRASHEADIAEKLEAIRTFSRE-QASRGGAGATLAEMLDRATQMARTDDAYLVDGKPVLTFWGFV---------------PEDPAHAPAVFN-PVAAL 99
            WYA   G+V P S A  E RAS +A + E    +R+ S   +A  G +      +LD+          YLVDGKPVLTFWGFV               P +P  APA+   PV A+
Sbjct:   61 WYAPTEGDVVPWSSATDEERASAKAQLIEVQAKLRSVSATMKADEGRSTQIFGRLLDKVIYFPDDSHLYLVDGKPVLTFWGFVDPTGPVEDDPLGRLQPREPLVAPAIAEAPVVAV 176
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig98516.31671.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7X2FV26_9PROT1.870e-8190.37VWA domain-containing protein n=1 Tax=Alphaproteob... [more]
A0A154W6Y1_9PROT6.580e-3669.70VWFA domain-containing protein n=2 Tax=Oceanibacul... [more]
E1VGZ6_9GAMM1.240e-637.07Uncharacterized protein n=1 Tax=gamma proteobacter... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 162..182
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 139..187
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig98516contigEcto-sp8_S_contig98516:2..562 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig98516.31671.1mRNA_Ecto-sp8_S_contig98516.31671.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig98516 2..562 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig98516.31671.1 ID=prot_Ecto-sp8_S_contig98516.31671.1|Name=mRNA_Ecto-sp8_S_contig98516.31671.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=187bp
WYAAWTGEVEPLSEAAAEVRASHEADIAEKLEAIRTFSREQASRGGAGAT
LAEMLDRATQMARTDDAYLVDGKPVLTFWGFVPEDPAHAPAVFNPVAALP
AAPAASAAALAVPVAGSGGWWRWLLLLLLLGLLGFLTLKACEPLPPQIVE
REMPNDDAATALEDLKKRGEELDLLLGDLSNKREEQL
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