prot_Ecto-sp8_S_contig984.31645.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig984.31645.1
Unique Nameprot_Ecto-sp8_S_contig984.31645.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length261
Homology
BLAST of mRNA_Ecto-sp8_S_contig984.31645.1 vs. uniprot
Match: D7G736_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G736_ECTSI)

HSP 1 Score: 488 bits (1256), Expect = 4.770e-173
Identity = 247/260 (95.00%), Postives = 254/260 (97.69%), Query Frame = 0
Query:    1 MYLFATYWVWYTGTAYFALSFATACAHFRRWSAATQAGAPEHGNGGGGSDRPGPSWNNLTGDVSTPALRTRIHPLEQAVLAIQLFAWNVACLGSLFVAIIYWSSLYTGTPITSVDLNAHTLIAFVMVADQLLVATPFRIRDMWKAEVFAITYLVYSLLWYFLGQELIYVILDWDRHFWEAFSYSAAGIFVLIPATSVLHYYIFRLRESIYATCRQRAESSSGVLNDRLLSAEDGGSSTQSESVTSHVPQTGTDLAAIENV 260
            MYLFATYWVWYTGTAYFALSFATACAHFRRWSAATQA AP++G+ GGGSDRPGPSW+NLTGDVSTPALRTRIHPLEQAVLAIQLF WNVACLGSLFVAIIYWSSLYTGTPITSVD+NAHTLIAFVMVADQ+LVATPFRIRDMWKAEVFAITYLVYSLLWYFL QELIYVILDWDRHFWEAFSYS AGIFVLIPATSVLHYYIFRLRESIYATCRQRAE+SSGVLNDRLLSAEDGGSSTQSESVTSHVPQTGTDLAAIE V
Sbjct:   51 MYLFATYWVWYTGTAYFALSFATACAHFRRWSAATQARAPDNGSAGGGSDRPGPSWSNLTGDVSTPALRTRIHPLEQAVLAIQLFTWNVACLGSLFVAIIYWSSLYTGTPITSVDMNAHTLIAFVMVADQMLVATPFRIRDMWKAEVFAITYLVYSLLWYFLEQELIYVILDWDRHFWEAFSYSVAGIFVLIPATSVLHYYIFRLRESIYATCRQRAEASSGVLNDRLLSAEDGGSSTQSESVTSHVPQTGTDLAAIETV 310          
BLAST of mRNA_Ecto-sp8_S_contig984.31645.1 vs. uniprot
Match: D7FX10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX10_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 3.610e-19
Identity = 51/152 (33.55%), Postives = 84/152 (55.26%), Query Frame = 0
Query:   74 PLEQAVLAIQLFAWNVACLGSLFVAIIYWSSLYT-----GTPITSVDLNAHTLIAFVMVADQLLVATPFRIRDMWKAEVFAITYLVYSLLWYFLGQE----LIYVILDWDRHFWEAFSYSAAGIFVLIPATSVLHYYIFRLRESIYATCRQR 216
            P+ + +  +QL  WN+AC+ SL V  ++ S  Y      GT   + D+ AH L+AF M+ DQLL+A  F++  M   +++ + YL +S++W++ G E    L    LDW  +  +A       + VL+P   +LH  +FRLRE++Y   R +
Sbjct:   10 PVPRGLRWLQLVLWNIACIASLLVTFVWASEDYVRQVRQGTK--NFDVQAHGLVAFFMLVDQLLIADTFKLGHMIFTQIYGLVYLAFSVIWFYKGPEDEKYLYEDTLDWGENRLQACLSGGVAVGVLVPIAGLLHLVVFRLREALYGRVRDK 159          
BLAST of mRNA_Ecto-sp8_S_contig984.31645.1 vs. uniprot
Match: A0A6H5JVA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVA0_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 5.060e-18
Identity = 48/150 (32.00%), Postives = 84/150 (56.00%), Query Frame = 0
Query:   74 PLEQAVLAIQLFAWNVACLGSLFVAIIYWSSLYTGTP---ITSVDLNAHTLIAFVMVADQLLVATPFRIRDMWKAEVFAITYLVYSLLWYFLGQE----LIYVILDWDRHFWEAFSYSAAGIFVLIPATSVLHYYIFRLRESIYATCRQR 216
            P+ + +  +QL  WN+AC+ SL V  ++ +  Y       + + D+ AH L+AF M+ DQLL+A  +++  M   +++ + YL +S++W++ G E    L    LDWD +  +A       + VL+P   +LH  +FRLRE++Y   R +
Sbjct:   92 PVPRGLRWLQLVLWNIACIASLLVTFVWATEDYVRQVRQGVKNFDVQAHGLVAFFMLVDQLLIADTYKLGHMIFTQIYGLVYLAFSVVWFYNGPEDEKYLYEDTLDWDENRLQACLSGGVAVGVLVPIAGLLHLGVFRLREALYRRVRDK 241          
BLAST of mRNA_Ecto-sp8_S_contig984.31645.1 vs. uniprot
Match: A0A1S3KB91_LINUN (protein rolling stone n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KB91_LINUN)

HSP 1 Score: 53.9 bits (128), Expect = 7.360e-5
Identity = 40/142 (28.17%), Postives = 68/142 (47.89%), Query Frame = 0
Query:   87 WNVACLGSLFVAIIYWS-----SLYTGTPITSVDLNAHTLIAFVMVADQLLVATPFRIRDMWKAEVFAITYLVYSLLWYFLGQ------ELIYVILDWDRHFWEAFSYSAAGIFVLIPATSVLHYYIFRLRESIYATCRQRA 217
            +N++   ++ VA +YW       L  G  I  +D+  H   A  +++D  + ATP RI     + ++AI YL++S+++  L          IY  LDWD     A  Y+     V +P    + Y ++RLR ++Y  C  R+
Sbjct:  127 YNISSNAAIVVAALYWGLRIPPKLAAGGEIHYMDVGTHLGNAIYVLSDIFITATPVRIYHFLHSSLYAIVYLIFSVVYDVLKGTNAVEGSYIYPQLDWDVPGTAAI-YAVLVALVAVPLVQCVLYGLYRLRLALYGCCCPRS 267          
BLAST of mRNA_Ecto-sp8_S_contig984.31645.1 vs. uniprot
Match: H2ZLY3_CIOSA (Uncharacterized protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZLY3_CIOSA)

HSP 1 Score: 53.1 bits (126), Expect = 8.380e-5
Identity = 39/120 (32.50%), Postives = 62/120 (51.67%), Query Frame = 0
Query:   89 VACLGSLFVAIIYWSSLYTGTPITSV-DLNAHTLIAFVMVADQLLVATPFRIRDMWKAEVFAITYLVYSLLWYFLGQE-LIYVILDWDRHFWEAFSYSAAGIFVLIPATSVLHYYIFRLR 206
            VA   SL + I+YW+ L   TP  SV  +N H +   +M  D  +VA P R+       +FA+ Y+V+SL+ +  G E  IY +L+W  +   +   S   + V  P    L++ +F+LR
Sbjct:   78 VATDASLIITILYWALL---TPNFSVFSINNHAINFVIMFIDFFIVAIPTRLLHFIYVSLFALVYIVFSLILHGSGYESAIYPVLNWSTNPGISAGISVGAVIVAPPIVHGLYWCVFQLR 194          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig984.31645.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G736_ECTSI4.770e-17395.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FX10_ECTSI3.610e-1933.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVA0_9PHAE5.060e-1832.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1S3KB91_LINUN7.360e-528.17protein rolling stone n=2 Tax=Lingula unguis TaxID... [more]
H2ZLY3_CIOSA8.380e-532.50Uncharacterized protein n=1 Tax=Ciona savignyi Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12242UNCHARACTERIZEDcoord: 3..221
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 203..260
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 136..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 105..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 183..202
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 172..182
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
NoneNo IPR availableTMHMMTMhelixcoord: 116..135
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 148..170
NoneNo IPR availableTMHMMTMhelixcoord: 180..202
IPR039860Protein rolling stonePANTHERPTHR12242:SF1LD06593P-RELATEDcoord: 3..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig984contigEcto-sp8_S_contig984:10121..13607 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig984.31645.1mRNA_Ecto-sp8_S_contig984.31645.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig984 9407..15347 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig984.31645.1 ID=prot_Ecto-sp8_S_contig984.31645.1|Name=mRNA_Ecto-sp8_S_contig984.31645.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=261bp
MYLFATYWVWYTGTAYFALSFATACAHFRRWSAATQAGAPEHGNGGGGSD
RPGPSWNNLTGDVSTPALRTRIHPLEQAVLAIQLFAWNVACLGSLFVAII
YWSSLYTGTPITSVDLNAHTLIAFVMVADQLLVATPFRIRDMWKAEVFAI
TYLVYSLLWYFLGQELIYVILDWDRHFWEAFSYSAAGIFVLIPATSVLHY
YIFRLRESIYATCRQRAESSSGVLNDRLLSAEDGGSSTQSESVTSHVPQT
GTDLAAIENV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039860Rost