prot_Ecto-sp8_S_contig98350.31638.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig98350.31638.1
Unique Nameprot_Ecto-sp8_S_contig98350.31638.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length54
Homology
BLAST of mRNA_Ecto-sp8_S_contig98350.31638.1 vs. uniprot
Match: D8LSM6_ECTSI (GTPase Der n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSM6_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 3.670e-25
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0
Query:    1 RSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKV 52
            +SSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKV
Sbjct:  410 KSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKV 461          
BLAST of mRNA_Ecto-sp8_S_contig98350.31638.1 vs. uniprot
Match: A0A836CJC9_9STRA (GTPase Der n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJC9_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 6.410e-19
Identity = 39/52 (75.00%), Postives = 48/52 (92.31%), Query Frame = 0
Query:    1 RSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKV 52
            +SSLLN+L+G+ R+IVSDV GTTRD+IDA+FERG RTYRL+DTAGIRRK K+
Sbjct:   64 KSSLLNKLYGQERAIVSDVAGTTRDTIDALFERGDRTYRLIDTAGIRRKKKI 115          
BLAST of mRNA_Ecto-sp8_S_contig98350.31638.1 vs. uniprot
Match: DER_DESAH (GTPase Der n=1 Tax=Desulforapulum autotrophicum (strain ATCC 43914 / DSM 3382 / VKM B-1955 / HRM2) TaxID=177437 RepID=DER_DESAH)

HSP 1 Score: 84.3 bits (207), Expect = 9.650e-18
Identity = 38/53 (71.70%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    1 RSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKVR 53
            +SSL+NRLFG++R +VS VPGTTRDS+D   ER GR +RL+DTAGIRRKGKVR
Sbjct:  200 KSSLINRLFGKSRVVVSHVPGTTRDSVDLSIERNGRRFRLIDTAGIRRKGKVR 252          
BLAST of mRNA_Ecto-sp8_S_contig98350.31638.1 vs. uniprot
Match: A0A524GIU2_9DELT (GTPase Der n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A524GIU2_9DELT)

HSP 1 Score: 84.0 bits (206), Expect = 1.220e-17
Identity = 36/52 (69.23%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    1 RSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKV 52
            +SSL+NRL GE R +VSD+PGTTRD++D + ER GR+Y L+DTAGIRRKGKV
Sbjct:  194 KSSLINRLLGEERMVVSDIPGTTRDAVDTLLERNGRSYLLIDTAGIRRKGKV 245          
BLAST of mRNA_Ecto-sp8_S_contig98350.31638.1 vs. uniprot
Match: A0A523A5J6_9DELT (GTPase Der n=1 Tax=Desulfobulbaceae bacterium TaxID=2053307 RepID=A0A523A5J6_9DELT)

HSP 1 Score: 83.6 bits (205), Expect = 1.720e-17
Identity = 37/53 (69.81%), Postives = 45/53 (84.91%), Query Frame = 0
Query:    1 RSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKVR 53
            +SSL+NRL GE R +VSD+PGTTRDS+D +  RG + YRL+DTAGIRRKGKVR
Sbjct:  200 KSSLINRLLGEERMVVSDLPGTTRDSVDTLLVRGDKKYRLIDTAGIRRKGKVR 252          
BLAST of mRNA_Ecto-sp8_S_contig98350.31638.1 vs. uniprot
Match: A0A7W0EMM8_9DELT (GTPase Der n=1 Tax=Desulfobulbaceae bacterium TaxID=2053307 RepID=A0A7W0EMM8_9DELT)

HSP 1 Score: 82.0 bits (201), Expect = 6.120e-17
Identity = 37/52 (71.15%), Postives = 44/52 (84.62%), Query Frame = 0
Query:    1 RSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKV 52
            +SSL+NRL GE R +VSDVPGTTRDS+D + ER G+ Y L+DTAGIRRKGKV
Sbjct:  202 KSSLVNRLLGEERMVVSDVPGTTRDSVDTLLERHGQQYLLIDTAGIRRKGKV 253          
BLAST of mRNA_Ecto-sp8_S_contig98350.31638.1 vs. uniprot
Match: A0A7C2XS17_9DELT (GTPase Der n=1 Tax=Desulfurivibrio alkaliphilus TaxID=427923 RepID=A0A7C2XS17_9DELT)

HSP 1 Score: 81.3 bits (199), Expect = 1.040e-16
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    1 RSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKV 52
            +SSL+NRL GE R +VSD+PGTTRDS+D M  RG + Y L+DTAGIRRKGKV
Sbjct:  165 KSSLVNRLLGEERMVVSDLPGTTRDSVDTMLTRGAKNYLLIDTAGIRRKGKV 216          
BLAST of mRNA_Ecto-sp8_S_contig98350.31638.1 vs. uniprot
Match: UPI001F29CD01 (50S ribosome-binding GTPase n=1 Tax=Xanthomonas perforans TaxID=442694 RepID=UPI001F29CD01)

HSP 1 Score: 76.3 bits (186), Expect = 1.130e-16
Identity = 35/52 (67.31%), Postives = 42/52 (80.77%), Query Frame = 0
Query:    1 RSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKV 52
            +S+L+NRL GE R I S+VPGTTRDSI    ER GR YRL+DTAG+RR+GKV
Sbjct:   60 KSTLVNRLLGEERMIASEVPGTTRDSIAVDLERDGRQYRLIDTAGLRRRGKV 111          
BLAST of mRNA_Ecto-sp8_S_contig98350.31638.1 vs. uniprot
Match: A0A2N6BZY9_9DELT (GTPase Der n=1 Tax=Desulfobulbaceae bacterium TaxID=2053307 RepID=A0A2N6BZY9_9DELT)

HSP 1 Score: 81.3 bits (199), Expect = 1.140e-16
Identity = 34/53 (64.15%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    1 RSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKVR 53
            +SSL+N+L G+ R +VSD+PGTTRDS+D++ E+ G+ Y L+DTAGIRRKGKVR
Sbjct:  202 KSSLINKLLGQDRMLVSDIPGTTRDSVDSLLEKNGKQYLLIDTAGIRRKGKVR 254          
BLAST of mRNA_Ecto-sp8_S_contig98350.31638.1 vs. uniprot
Match: A0A0G4FDK2_VITBC (GTPase Der n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FDK2_VITBC)

HSP 1 Score: 81.3 bits (199), Expect = 1.240e-16
Identity = 39/52 (75.00%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    1 RSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKV 52
            +SSLLNRL GE R IVSDVPGTTRD+ID   ER GR YRLVDTAGIRR+ +V
Sbjct:  362 KSSLLNRLLGEQRVIVSDVPGTTRDAIDVELERQGRVYRLVDTAGIRRRSRV 413          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig98350.31638.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSM6_ECTSI3.670e-2598.08GTPase Der n=2 Tax=Ectocarpus TaxID=2879 RepID=D8L... [more]
A0A836CJC9_9STRA6.410e-1975.00GTPase Der n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
DER_DESAH9.650e-1871.70GTPase Der n=1 Tax=Desulforapulum autotrophicum (s... [more]
A0A524GIU2_9DELT1.220e-1769.23GTPase Der n=1 Tax=Desulfobacterales bacterium Tax... [more]
A0A523A5J6_9DELT1.720e-1769.81GTPase Der n=1 Tax=Desulfobulbaceae bacterium TaxI... [more]
A0A7W0EMM8_9DELT6.120e-1771.15GTPase Der n=1 Tax=Desulfobulbaceae bacterium TaxI... [more]
A0A7C2XS17_9DELT1.040e-1669.23GTPase Der n=1 Tax=Desulfurivibrio alkaliphilus Ta... [more]
UPI001F29CD011.130e-1667.3150S ribosome-binding GTPase n=1 Tax=Xanthomonas pe... [more]
A0A2N6BZY9_9DELT1.140e-1664.15GTPase Der n=1 Tax=Desulfobulbaceae bacterium TaxI... [more]
A0A0G4FDK2_VITBC1.240e-1675.00GTPase Der n=1 Tax=Vitrella brassicaformis (strain... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 2..47
e-value: 2.5E-11
score: 43.7
NoneNo IPR availableGENE3D3.40.50.300coord: 1..49
e-value: 3.5E-17
score: 65.1
NoneNo IPR availablePANTHERPTHR43834FAMILY NOT NAMEDcoord: 2..52
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig98350contigEcto-sp8_S_contig98350:193..354 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig98350.31638.1mRNA_Ecto-sp8_S_contig98350.31638.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig98350 193..354 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig98350.31638.1 ID=prot_Ecto-sp8_S_contig98350.31638.1|Name=mRNA_Ecto-sp8_S_contig98350.31638.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=54bp
RSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKG
KVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR027417P-loop_NTPase