prot_Ecto-sp8_S_contig9827.31622.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9827.31622.1
Unique Nameprot_Ecto-sp8_S_contig9827.31622.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length137
Homology
BLAST of mRNA_Ecto-sp8_S_contig9827.31622.1 vs. uniprot
Match: D7FQB6_ECTSI (Ribosomal_S17_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB6_ECTSI)

HSP 1 Score: 272 bits (696), Expect = 9.680e-92
Identity = 131/136 (96.32%), Postives = 133/136 (97.79%), Query Frame = 0
Query:    1 MTQGKGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 136
            + + KGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHE CINTAVSVRKQFRMF
Sbjct:   56 VAKSKGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEPCINTAVSVRKQFRMF 191          
BLAST of mRNA_Ecto-sp8_S_contig9827.31622.1 vs. uniprot
Match: A0A835Z9X9_9STRA (Ribosomal protein S17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X9_9STRA)

HSP 1 Score: 232 bits (591), Expect = 3.890e-76
Identity = 107/132 (81.06%), Postives = 121/132 (91.67%), Query Frame = 0
Query:    5 KGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 136
            KGMRF KN+GLGFKTPK A  GTYVDKKCPFTG+VSIRGRILKGLV+SAGKM NT VIRRDYLH+V+KYRRFEKRHKN+ VH +PC+ NVKEGDI+T+GQCRPLSKT+RFN LEHE CINT++SV+KQFRMF
Sbjct:   33 KGMRFYKNIGLGFKTPKLAISGTYVDKKCPFTGNVSIRGRILKGLVLSAGKMKNTCVIRRDYLHYVTKYRRFEKRHKNLMVHLSPCFPNVKEGDILTVGQCRPLSKTIRFNALEHEPCINTSISVKKQFRMF 164          
BLAST of mRNA_Ecto-sp8_S_contig9827.31622.1 vs. uniprot
Match: A0A7S2XWS0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWS0_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.490e-71
Identity = 104/132 (78.79%), Postives = 118/132 (89.39%), Query Frame = 0
Query:    5 KGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 136
            KGMRF KN+GLGFKTPK A EGTYVDKKCPFTG+VSIRGRILKGLVIS  KM NTI++RRDYLH++SKYRRFEKRHKNM VH +PC+  +KEGD+VTIGQCRPLSKTVRFNVLEH   +N A++V+KQFRMF
Sbjct:   35 KGMRFYKNIGLGFKTPKLAIEGTYVDKKCPFTGNVSIRGRILKGLVIST-KMKNTIIVRRDYLHYISKYRRFEKRHKNMAVHASPCFDTIKEGDVVTIGQCRPLSKTVRFNVLEHLPSVNQALNVKKQFRMF 165          
BLAST of mRNA_Ecto-sp8_S_contig9827.31622.1 vs. uniprot
Match: A0A7R9U3I9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3I9_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.640e-68
Identity = 98/132 (74.24%), Postives = 118/132 (89.39%), Query Frame = 0
Query:    5 KGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 136
            KGMR+VKN+GLGFKTP+ A EG YVD+KCPFTG+VSIRG+ILKG+VIS  KMT T+V+RRDYLHFV KY+R+EKRHKNMTVHC+P + NVK GD+VT+GQCRPLSKT+RFNVL HE  +N +VSV+KQFR+F
Sbjct:   56 KGMRYVKNIGLGFKTPQRAIEGNYVDRKCPFTGNVSIRGKILKGIVIS-NKMTRTVVVRRDYLHFVRKYKRYEKRHKNMTVHCSPAFTNVKPGDVVTVGQCRPLSKTIRFNVLVHEPAVNQSVSVKKQFRVF 186          
BLAST of mRNA_Ecto-sp8_S_contig9827.31622.1 vs. uniprot
Match: F0XZW5_AURAN (Ribosomal_S17_N domain-containing protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0XZW5_AURAN)

HSP 1 Score: 211 bits (538), Expect = 5.080e-68
Identity = 99/132 (75.00%), Postives = 119/132 (90.15%), Query Frame = 0
Query:    5 KGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 136
            KGMR+V+NVGLGFKTPK A EG+YVDKKCPFTG+VSIRGRILKG+VIS  KM  T+VIRRDYL++  KYRRFEKRHKNM+VHC+PC++NVKEGDIVT+GQCRPL+KTVRFNVL HE  +N +++V+K FR+F
Sbjct:   37 KGMRYVRNVGLGFKTPKLALEGSYVDKKCPFTGNVSIRGRILKGMVIST-KMKRTLVIRRDYLNWCGKYRRFEKRHKNMSVHCSPCFENVKEGDIVTVGQCRPLTKTVRFNVLTHEPAVNQSLNVKKVFRVF 167          
BLAST of mRNA_Ecto-sp8_S_contig9827.31622.1 vs. uniprot
Match: A0A7S4WCA2_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4WCA2_9DINO)

HSP 1 Score: 209 bits (531), Expect = 5.530e-67
Identity = 98/132 (74.24%), Postives = 114/132 (86.36%), Query Frame = 0
Query:    5 KGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 136
            K MR+ KNVGLG KTPK A EGTYVDKKCPFTGDV+IRGRILKGLVIS  KMT TI++RRDYLH++ KYRR+EKRHKN+ VHC+P +  V EGD+VTIGQCRPLSKTVRFNV+EH   +N A++V+KQFRMF
Sbjct:   35 KPMRWTKNVGLGIKTPKNAVEGTYVDKKCPFTGDVAIRGRILKGLVIST-KMTRTIIVRRDYLHYIRKYRRYEKRHKNVAVHCSPAFDTVSEGDVVTIGQCRPLSKTVRFNVIEHLPTVNKAINVKKQFRMF 165          
BLAST of mRNA_Ecto-sp8_S_contig9827.31622.1 vs. uniprot
Match: A0A7S1XVW4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVW4_9STRA)

HSP 1 Score: 206 bits (524), Expect = 6.650e-66
Identity = 95/132 (71.97%), Postives = 117/132 (88.64%), Query Frame = 0
Query:    5 KGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 136
            KG+R+VK++GLGFKTP+TA  G+YVDKKCPFTG+VSIRG+ILKG+VIS  KM  TIV+RRDYLHFV KY+R+EKRHKN+T HC+PC+ NVK GD+VTIGQCRPL+KT+RFNVL HE   N +V+V+KQFR+F
Sbjct:   36 KGIRYVKSIGLGFKTPETAISGSYVDKKCPFTGNVSIRGKILKGVVIS-NKMKRTIVVRRDYLHFVRKYKRYEKRHKNVTAHCSPCFVNVKPGDVVTIGQCRPLAKTIRFNVLTHEPSTNQSVNVKKQFRVF 166          
BLAST of mRNA_Ecto-sp8_S_contig9827.31622.1 vs. uniprot
Match: A0A812UUF3_SYMMI (RPS11 protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UUF3_SYMMI)

HSP 1 Score: 204 bits (519), Expect = 1.150e-65
Identity = 94/130 (72.31%), Postives = 115/130 (88.46%), Query Frame = 0
Query:    7 MRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 136
            MRF K+VGLGFKTPK A EG+YVDKKCPFTG+VSIRGRILKG+V+S  KM  T+VIRRDYL +V KYRRFEKRH NM+VHC+PC+QNV EGD+VT+GQCRPL+KTV+FNVLEH+  +N +++V+K FR+F
Sbjct:    1 MRFYKSVGLGFKTPKAASEGSYVDKKCPFTGNVSIRGRILKGIVVST-KMKRTVVIRRDYLQYVRKYRRFEKRHANMSVHCSPCFQNVCEGDVVTVGQCRPLAKTVKFNVLEHQPAVNKSLNVKKIFRVF 129          
BLAST of mRNA_Ecto-sp8_S_contig9827.31622.1 vs. uniprot
Match: A0A4D9CZU0_9STRA (Ribosomal_S17_N domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZU0_9STRA)

HSP 1 Score: 204 bits (518), Expect = 7.540e-65
Identity = 95/131 (72.52%), Postives = 112/131 (85.50%), Query Frame = 0
Query:    6 GMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 136
            G R+ + VGLGFKTPK A+ GTYVDKKCPFTG VSIRGRILKG+V+S  KM  T++IRRDYLH+VSKY RFEKRHKN+  HC+P +  VKEGDIVT+GQCRPLSKTVRFNVL+HE  IN A+S++KQFR+F
Sbjct:   47 GARWTREVGLGFKTPKEAKAGTYVDKKCPFTGSVSIRGRILKGIVLST-KMNRTVIIRRDYLHWVSKYSRFEKRHKNLAAHCSPAFPQVKEGDIVTVGQCRPLSKTVRFNVLQHEPSINQALSIKKQFRVF 176          
BLAST of mRNA_Ecto-sp8_S_contig9827.31622.1 vs. uniprot
Match: A0A7S1UA06_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UA06_9STRA)

HSP 1 Score: 204 bits (520), Expect = 7.010e-64
Identity = 94/131 (71.76%), Postives = 116/131 (88.55%), Query Frame = 0
Query:    6 GMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 136
            G+R+VK++GLGFKTP+TA  G+YVDKKCPFTG+VSIRG+ILKG+VIS  KM  TIV+RRDYLHFV KY+R+EKRHKN+T HC+PC+ NVK GD+VTIGQCRPL+KT+RFNVL HE   N +V+V+KQFR+F
Sbjct:  140 GIRYVKSIGLGFKTPETAISGSYVDKKCPFTGNVSIRGKILKGVVIS-NKMKRTIVVRRDYLHFVRKYKRYEKRHKNVTAHCSPCFVNVKPGDVVTIGQCRPLAKTIRFNVLTHEPSTNQSVNVKKQFRVF 269          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9827.31622.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB6_ECTSI9.680e-9296.32Ribosomal_S17_N domain-containing protein n=1 Tax=... [more]
A0A835Z9X9_9STRA3.890e-7681.06Ribosomal protein S17-domain-containing protein n=... [more]
A0A7S2XWS0_9STRA1.490e-7178.79Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9U3I9_9STRA1.640e-6874.24Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
F0XZW5_AURAN5.080e-6875.00Ribosomal_S17_N domain-containing protein n=3 Tax=... [more]
A0A7S4WCA2_9DINO5.530e-6774.24Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A7S1XVW4_9STRA6.650e-6671.97Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A812UUF3_SYMMI1.150e-6572.31RPS11 protein n=2 Tax=Symbiodinium microadriaticum... [more]
A0A4D9CZU0_9STRA7.540e-6572.52Ribosomal_S17_N domain-containing protein n=3 Tax=... [more]
A0A7S1UA06_9STRA7.010e-6471.76Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000266Ribosomal protein S17/S11PRINTSPR00973RIBOSOMALS17coord: 107..114
score: 73.25
coord: 97..107
score: 63.27
coord: 63..86
score: 34.92
IPR000266Ribosomal protein S17/S11PFAMPF00366Ribosomal_S17coord: 48..118
e-value: 6.4E-26
score: 90.3
IPR000266Ribosomal protein S17/S11PANTHERPTHR1074440S RIBOSOMAL PROTEIN S11 FAMILY MEMBERcoord: 4..136
IPR03244040S ribosomal protein S11, N-terminalPFAMPF16205Ribosomal_S17_Ncoord: 5..46
e-value: 2.6E-24
score: 85.4
NoneNo IPR availableGENE3D2.40.50.1000coord: 1..136
e-value: 1.2E-61
score: 208.9
NoneNo IPR availablePANTHERPTHR10744:SF25coord: 4..136
NoneNo IPR availablePRODOMPD001295coord: 44..114
e-value: 4.0E-24
score: 271.0
IPR019979Ribosomal protein S17, conserved sitePROSITEPS00056RIBOSOMAL_S17coord: 97..109
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 42..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9827contigEcto-sp8_S_contig9827:2521..4378 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9827.31622.1mRNA_Ecto-sp8_S_contig9827.31622.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9827 2055..4393 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9827.31622.1 ID=prot_Ecto-sp8_S_contig9827.31622.1|Name=mRNA_Ecto-sp8_S_contig9827.31622.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=137bp
MTQGKGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLV
ISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIV
TIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000266Ribosomal_S17/S11
IPR032440Ribosomal_S11_N
IPR019979Ribosomal_S17_CS
IPR012340NA-bd_OB-fold