prot_Ecto-sp8_S_contig98214.31614.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig98214.31614.1
Unique Nameprot_Ecto-sp8_S_contig98214.31614.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length50
Homology
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BLAST of mRNA_Ecto-sp8_S_contig98214.31614.1 vs. uniprot
Match: A0A6H5LB52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB52_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 2.930e-27
Identity = 49/50 (98.00%), Postives = 50/50 (100.00%), Query Frame = 0 
Query:    1 MHQWQAHKTTVTSVHGADYRGKLDLLVTAGDDCYVHVWTIAGAHIGTFGQ 50
            MHQWQAHKTTVTSVHGADYRGKLDLLVTAGDDCYVH+WTIAGAHIGTFGQ
Sbjct:  908 MHQWQAHKTTVTSVHGADYRGKLDLLVTAGDDCYVHMWTIAGAHIGTFGQ 957
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BLAST of mRNA_Ecto-sp8_S_contig98214.31614.1 vs. uniprot
Match: D7FNP1_ECTSI (Similar to WD repeat domain 49 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP1_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 1.390e-26
Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 0 
Query:    1 MHQWQAHKTTVTSVHGADYRGKLDLLVTAGDDCYVHVWTIAGAHIGTFGQ 50
            MHQWQAHKTTVTSV GADYRGKLDLLVTAGDDCYVHVWTIAGAHIGTFGQ
Sbjct:  977 MHQWQAHKTTVTSVQGADYRGKLDLLVTAGDDCYVHVWTIAGAHIGTFGQ 1026
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig98214.31614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LB52_9PHAE2.930e-2798.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNP1_ECTSI1.390e-2698.00Similar to WD repeat domain 49 n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig98214contigEcto-sp8_S_contig98214:367..516 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig98214.31614.1mRNA_Ecto-sp8_S_contig98214.31614.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig98214 367..516 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig98214.31614.1 ID=prot_Ecto-sp8_S_contig98214.31614.1|Name=mRNA_Ecto-sp8_S_contig98214.31614.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=50bp
MHQWQAHKTTVTSVHGADYRGKLDLLVTAGDDCYVHVWTIAGAHIGTFGQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf