prot_Ecto-sp8_S_contig9811.31599.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig9811.31599.1
Unique Name	prot_Ecto-sp8_S_contig9811.31599.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	147

Homology

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BLAST of mRNA_Ecto-sp8_S_contig9811.31599.1 vs. uniprot
Match: D7G8K7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K7_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 4.990e-37
Identity = 72/114 (63.16%), Postives = 86/114 (75.44%), Query Frame = 0

Query:   14 KGYSIYSNTGDKMGAFPANAKKSADFQADVWFVASRKHGETRFEGVDDATKKLTPVTLGNDNSPAKIAEEEEQA-MLERLNNLSIEDADTGSQRKDVSDDEDAVLTVAEVAQAA 126
            KGY I + +G ++G  PA+AKK+ D QADVW V SR+     FEGVDDATKKLT  T GNDNS AKIAEE + A +++RL NLS E+ + GSQR+D SDDEDA LTVAEVAQAA
Sbjct:   15 KGYKISAISGAELGVLPASAKKAHDVQADVWLVGSRQEAANGFEGVDDATKKLTTATQGNDNSSAKIAEEADLAGVVKRLTNLSFEETEKGSQREDASDDEDAALTVAEVAQAA 128

[Close]

BLAST of mRNA_Ecto-sp8_S_contig9811.31599.1 vs. uniprot
Match: D7G3S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S4_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 3.340e-36
Identity = 72/114 (63.16%), Postives = 86/114 (75.44%), Query Frame = 0

Query:   14 KGYSIYSNTGDKMGAFPANAKKSADFQADVWFVASRKHGETRFEGVDDATKKLTPVTLGNDNSPAKIAEEEEQA-MLERLNNLSIEDADTGSQRKDVSDDEDAVLTVAEVAQAA 126
            KGY I + +G ++G  PA+AKK+ D QADVW V SR+     FEGVDDATKKLT  T GNDNS AKIAEE + A +++RL NLS E+ + GSQR+D SDDEDA LTVAEVAQAA
Sbjct:   54 KGYKISAISGAELGVLPASAKKAHDVQADVWLVGSRQEAANGFEGVDDATKKLTTATQGNDNSSAKIAEEADLAGVVKRLTNLSFEETEKGSQREDASDDEDAALTVAEVAQAA 167

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig9811.31599.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig9811.31599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G8K7_ECTSI	4.990e-37	63.16	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G3S4_ECTSI	3.340e-36	63.16	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 78..98

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig9811	contig	Ecto-sp8_S_contig9811:3659..6280 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig9811.31599.1	mRNA_Ecto-sp8_S_contig9811.31599.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig9811 3658..6280 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig9811.31599.1 ID=prot_Ecto-sp8_S_contig9811.31599.1|Name=mRNA_Ecto-sp8_S_contig9811.31599.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=147bp
RDKAQNDLCFADRKGYSIYSNTGDKMGAFPANAKKSADFQADVWFVASRK
HGETRFEGVDDATKKLTPVTLGNDNSPAKIAEEEEQAMLERLNNLSIEDA
DTGSQRKDVSDDEDAVLTVAEVAQAAAALADAVAAAVAEAGTDSGSP