prot_Ecto-sp8_S_contig97950.31571.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig97950.31571.1
Unique Nameprot_Ecto-sp8_S_contig97950.31571.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length56
Homology
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BLAST of mRNA_Ecto-sp8_S_contig97950.31571.1 vs. uniprot
Match: D7FXJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ5_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 7.300e-29
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 
Query:    1 GVLFFAYGSETSTAEHYLEQVLVSARRIKSLNPSTNITVVTNPGIRPEVEGVFDVV 56
            GVLFFAYGSETSTAEHYLEQVLVSARRIKSLNPSTNITVVTNPGIRPEVEGVFDVV
Sbjct:   35 GVLFFAYGSETSTAEHYLEQVLVSARRIKSLNPSTNITVVTNPGIRPEVEGVFDVV 90
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BLAST of mRNA_Ecto-sp8_S_contig97950.31571.1 vs. uniprot
Match: D8LTZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTZ7_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 6.180e-21
Identity = 40/56 (71.43%), Postives = 50/56 (89.29%), Query Frame = 0 
Query:    1 GVLFFAYGSETSTAEHYLEQVLVSARRIKSLNPSTNITVVTNPGIRPEVEGVFDVV 56
            G+LFFAYG+E +TAEHYL+Q + SARRIK LNPSTNIT+VTNPG+RP+++G FD V
Sbjct:   36 GILFFAYGAEITTAEHYLQQAITSARRIKLLNPSTNITLVTNPGMRPDIDGAFDAV 91
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig97950.31571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXJ5_ECTSI7.300e-29100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LTZ7_ECTSI6.180e-2171.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig97950contigEcto-sp8_S_contig97950:320..487 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig97950.31571.1mRNA_Ecto-sp8_S_contig97950.31571.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig97950 320..487 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig97950.31571.1 ID=prot_Ecto-sp8_S_contig97950.31571.1|Name=mRNA_Ecto-sp8_S_contig97950.31571.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=56bp
GVLFFAYGSETSTAEHYLEQVLVSARRIKSLNPSTNITVVTNPGIRPEVE
GVFDVV
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