prot_Ecto-sp8_S_contig97941.31568.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig97941.31568.1
Unique Nameprot_Ecto-sp8_S_contig97941.31568.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length148
Homology
BLAST of mRNA_Ecto-sp8_S_contig97941.31568.1 vs. uniprot
Match: A0A6H5JM24_9PHAE (RNB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JM24_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 8.030e-95
Identity = 146/148 (98.65%), Postives = 147/148 (99.32%), Query Frame = 0
Query:    1 RGSRWKIPKEEISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEIGVHIADVTYFVRPNSDLDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPQVDRLTYSCIWRMNVDGTLVDKPAWFGRTVIRSCCKLDYQTAQHMIE 148
            RGSRWKIP EEISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEIGVHIADVTYFVRPNSDLDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPQVDRLT+SCIWRMNVDGTLVDKPAWFGRTVIRSCCKLDYQTAQHMIE
Sbjct:  367 RGSRWKIPDEEISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEIGVHIADVTYFVRPNSDLDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPQVDRLTFSCIWRMNVDGTLVDKPAWFGRTVIRSCCKLDYQTAQHMIE 514          
BLAST of mRNA_Ecto-sp8_S_contig97941.31568.1 vs. uniprot
Match: A0A836CGT9_9STRA (RNB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGT9_9STRA)

HSP 1 Score: 217 bits (552), Expect = 1.140e-62
Identity = 105/145 (72.41%), Postives = 119/145 (82.07%), Query Frame = 0
Query:    5 WKIPKEEISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEIGVHIADVTYFVRPNSDLDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPQVDRLTYSCIWRMNVDGTLVD-KPAWFGRTVIRSCCKLDYQTAQHMIE 148
            WKIP  E + RRDLR  RIFTIDP  ARDLDDAL +TPL DGT EIGVHIADV++FV P  +LDREA+RRATT+YLVQ+A+PMLPPLLCE LCSLNP VDRL +S IWRMN DGTLV+ +  WFGRT+IRSCC LDY T Q +IE
Sbjct:  441 WKIPASEAAVRRDLRDARIFTIDPPTARDLDDALHVTPLPDGTVEIGVHIADVSHFVPPGGELDREAQRRATTIYLVQRALPMLPPLLCERLCSLNPGVDRLAFSAIWRMNRDGTLVEGEEPWFGRTIIRSCCTLDYGTVQKVIE 585          
BLAST of mRNA_Ecto-sp8_S_contig97941.31568.1 vs. uniprot
Match: A0A0L0HNT5_SPIPD (DIS3-like exonuclease 2 n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HNT5_SPIPD)

HSP 1 Score: 206 bits (524), Expect = 8.620e-59
Identity = 98/144 (68.06%), Postives = 117/144 (81.25%), Query Frame = 0
Query:    5 WKIPKEEISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEIGVHIADVTYFVRPNSDLDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPQVDRLTYSCIWRMNVDGTLVDKPAWFGRTVIRSCCKLDYQTAQHMIE 148
            W IP+EE  KRRDLR+ RIF+IDP  ARDLDDA+S+ PL DGTFE+GVHIADVT+FVRP + LD+EAR RATTVYLVQ+AIPMLP LLCEELCSLNP V+RL +S IW+MN    ++  P WFGRT+I+SC KL Y  AQ +I+
Sbjct:  820 WSIPQEEYRKRRDLRSERIFSIDPQTARDLDDAVSVKPLGDGTFEVGVHIADVTHFVRPGTALDKEARHRATTVYLVQKAIPMLPRLLCEELCSLNPGVERLAFSVIWKMNSSAMVIGTP-WFGRTIIKSCAKLSYDHAQRLID 962          
BLAST of mRNA_Ecto-sp8_S_contig97941.31568.1 vs. uniprot
Match: A0A812XFS0_9DINO (DIS3L2 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XFS0_9DINO)

HSP 1 Score: 205 bits (521), Expect = 1.290e-58
Identity = 95/144 (65.97%), Postives = 113/144 (78.47%), Query Frame = 0
Query:    5 WKIPKEEISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEIGVHIADVTYFVRPNSDLDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPQVDRLTYSCIWRMNVDGTLVDKPAWFGRTVIRSCCKLDYQTAQHMIE 148
            W++P+EE ++RRDL +  IFTIDPT A+DLDDAL I PL DG FE+GVHIADV++FV P S +D EARRR T+ YLV + IPMLPP+LCEELCSLNP VDRL +SCIW MN  G +     W+GRT+IR C KLDY TAQHMIE
Sbjct:  366 WRVPEEERARRRDLTSECIFTIDPTTAKDLDDALHIKPLGDGRFEVGVHIADVSHFVTPGSAVDEEARRRCTSTYLVTRVIPMLPPILCEELCSLNPNVDRLAFSCIWVMNDKGEMEPDEPWYGRTIIRCCAKLDYPTAQHMIE 509          
BLAST of mRNA_Ecto-sp8_S_contig97941.31568.1 vs. uniprot
Match: A0A5A8EAL7_CAFRO (RNB domain-containing protein n=6 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EAL7_CAFRO)

HSP 1 Score: 205 bits (521), Expect = 2.190e-58
Identity = 95/144 (65.97%), Postives = 113/144 (78.47%), Query Frame = 0
Query:    5 WKIPKEEISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEIGVHIADVTYFVRPNSDLDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPQVDRLTYSCIWRMNVDGTLVDKPAWFGRTVIRSCCKLDYQTAQHMIE 148
            W++P+EE ++RRDL +  IFTIDPT A+DLDDAL I PL DG FE+GVHIADV++FV P S +D EARRR T+ YLV + IPMLPP+LCEELCSLNP VDRL +SCIW MN  G +     W+GRT+IR C KLDY TAQHMIE
Sbjct:  868 WRVPEEERARRRDLTSECIFTIDPTTAKDLDDALHIKPLGDGRFEVGVHIADVSHFVTPGSAVDEEARRRCTSTYLVTRVIPMLPPILCEELCSLNPNVDRLAFSCIWVMNDKGEMEPDEPWYGRTIIRCCAKLDYPTAQHMIE 1011          
BLAST of mRNA_Ecto-sp8_S_contig97941.31568.1 vs. uniprot
Match: A0A507DV16_9FUNG (DIS3-like exonuclease 2 n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DV16_9FUNG)

HSP 1 Score: 204 bits (520), Expect = 2.950e-58
Identity = 99/144 (68.75%), Postives = 115/144 (79.86%), Query Frame = 0
Query:    5 WKIPKEEISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEIGVHIADVTYFVRPNSDLDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPQVDRLTYSCIWRMNVDGTLVDKPAWFGRTVIRSCCKLDYQTAQHMIE 148
            WKIP+ E +KRRD R  RIF+IDP  ARDLDDA+S+  + DGTFEIGVHIADV YFVRP S LD EAR RATTVYLVQ+AIPMLP LLCEELCSLNP V+RL +S +WRM+    ++DKP WFGRT+I+SC KL Y  AQ +IE
Sbjct:  715 WKIPEHEYAKRRDFREERIFSIDPQTARDLDDAVSVKSMGDGTFEIGVHIADVAYFVRPGSALDIEARSRATTVYLVQKAIPMLPRLLCEELCSLNPGVERLAFSVVWRMDSSARILDKP-WFGRTIIKSCAKLSYDHAQRLIE 857          
BLAST of mRNA_Ecto-sp8_S_contig97941.31568.1 vs. uniprot
Match: A0A507F1Q0_9FUNG (DIS3-like exonuclease 2 n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507F1Q0_9FUNG)

HSP 1 Score: 204 bits (520), Expect = 2.980e-58
Identity = 98/144 (68.06%), Postives = 117/144 (81.25%), Query Frame = 0
Query:    5 WKIPKEEISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEIGVHIADVTYFVRPNSDLDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPQVDRLTYSCIWRMNVDGTLVDKPAWFGRTVIRSCCKLDYQTAQHMIE 148
            W IP+EE SKRRDLR+ RIF+IDP  ARDLDDA+S+ PL DGTFE+GVHIADVT+FVRP + LD+EAR RATTVYLV++AIPMLP LLCEELCSLNP V+RL +S IW+MN     +  P WFGRT+I+SC KL Y  AQ +I+
Sbjct:  818 WSIPQEEYSKRRDLRSERIFSIDPQTARDLDDAVSVKPLGDGTFEVGVHIADVTHFVRPGTALDKEARHRATTVYLVRKAIPMLPRLLCEELCSLNPGVERLAFSVIWKMNSSAIGIGTP-WFGRTIIKSCAKLSYDHAQRLID 960          
BLAST of mRNA_Ecto-sp8_S_contig97941.31568.1 vs. uniprot
Match: UPI00109FC3E1 (DIS3-like exonuclease 2 n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=UPI00109FC3E1)

HSP 1 Score: 189 bits (480), Expect = 1.090e-57
Identity = 96/144 (66.67%), Postives = 109/144 (75.69%), Query Frame = 0
Query:    5 WKIPKEEISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEIGVHIADVTYFVRPNSDLDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPQVDRLTYSCIWRMNVDGTLVDKPAWFGRTVIRSCCKLDYQTAQHMIE 148
            W IP  E  KRRDLRA  IFTIDP  ARDLDDALS   LADG FE+GVHIADV+YFV  NS LD  A RRAT+VYLVQ+ IPMLP LLCEELCSLNP  DRLT S IW+++  G ++D+  WFGRT+IRSC KL Y  AQ +I+
Sbjct:   71 WVIPAVEYQKRRDLRAECIFTIDPVTARDLDDALSCKQLADGNFEVGVHIADVSYFVEENSALDFIASRRATSVYLVQKVIPMLPRLLCEELCSLNPMTDRLTVSVIWKLSPHGKILDE--WFGRTIIRSCMKLSYSHAQSLID 212          
BLAST of mRNA_Ecto-sp8_S_contig97941.31568.1 vs. uniprot
Match: UPI00159D10E9 (DIS3-like exonuclease 2 isoform X10 n=3 Tax=Simiiformes TaxID=314293 RepID=UPI00159D10E9)

HSP 1 Score: 197 bits (501), Expect = 1.480e-57
Identity = 98/147 (66.67%), Postives = 114/147 (77.55%), Query Frame = 0
Query:    2 GSRWKIPKEEISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEIGVHIADVTYFVRPNSDLDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPQVDRLTYSCIWRMNVDGTLVDKPAWFGRTVIRSCCKLDYQTAQHMIE 148
            G  W IP EE SKRRDLR   IFTIDP+ ARDLDDALS  PLADG+FE+GVHIADV+YFV   SDLD+ A  RAT+VYLVQ+ +PMLP LLCEELCSLNP  D+LT+S IW +   G ++D+  WFGRT+IRSC KL Y+ AQ MIE
Sbjct:  358 GLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGSFEVGVHIADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPAGKILDE--WFGRTIIRSCTKLSYEHAQSMIE 502          
BLAST of mRNA_Ecto-sp8_S_contig97941.31568.1 vs. uniprot
Match: A0A4D9CMF6_9STRA (RNB domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMF6_9STRA)

HSP 1 Score: 202 bits (513), Expect = 2.350e-57
Identity = 94/145 (64.83%), Postives = 116/145 (80.00%), Query Frame = 0
Query:    5 WKIPKEEISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEIGVHIADVTYFVRPNSDLDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPQVDRLTYSCIWRMNVDGTLV-DKPAWFGRTVIRSCCKLDYQTAQHMIE 148
            W +   E++KRRD RA R+FTIDP  A+DLDDAL I  L DGT E+GVHIADV++FV   + LD EA RRATTVYLVQ+ +PMLPPLLCE+LCSLNP V+RL +S +WRM+ DGTL+ D P W+GR+VIRSCCKLDY TAQ +++
Sbjct:  489 WTVSTAEVAKRRDFRAHRVFTIDPFTAKDLDDALHILDLGDGTVEVGVHIADVSFFVGEGTALDAEASRRATTVYLVQKVVPMLPPLLCEQLCSLNPNVERLAFSVVWRMHKDGTLLEDAPVWYGRSVIRSCCKLDYGTAQELVD 633          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig97941.31568.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JM24_9PHAE8.030e-9598.65RNB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CGT9_9STRA1.140e-6272.41RNB domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A0L0HNT5_SPIPD8.620e-5968.06DIS3-like exonuclease 2 n=1 Tax=Spizellomyces punc... [more]
A0A812XFS0_9DINO1.290e-5865.97DIS3L2 protein (Fragment) n=1 Tax=Symbiodinium sp.... [more]
A0A5A8EAL7_CAFRO2.190e-5865.97RNB domain-containing protein n=6 Tax=Cafeteria ro... [more]
A0A507DV16_9FUNG2.950e-5868.75DIS3-like exonuclease 2 n=1 Tax=Powellomyces hirtu... [more]
A0A507F1Q0_9FUNG2.980e-5868.06DIS3-like exonuclease 2 n=1 Tax=Spizellomyces sp. ... [more]
UPI00109FC3E11.090e-5766.67DIS3-like exonuclease 2 n=1 Tax=Erpetoichthys cala... [more]
UPI00159D10E91.480e-5766.67DIS3-like exonuclease 2 isoform X10 n=3 Tax=Simiif... [more]
A0A4D9CMF6_9STRA2.350e-5764.83RNB domain-containing protein n=1 Tax=Nannochlorop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001900Ribonuclease II/RSMARTSM00955RNB_2coord: 15..148
e-value: 5.5E-12
score: 50.8
IPR001900Ribonuclease II/RPFAMPF00773RNBcoord: 15..148
e-value: 6.0E-51
score: 173.7
NoneNo IPR availablePANTHERPTHR23355:SF9DIS3-LIKE EXONUCLEASE 2coord: 4..148
NoneNo IPR availablePANTHERPTHR23355RIBONUCLEASEcoord: 4..148
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 5..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig97941contigEcto-sp8_S_contig97941:1..444 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig97941.31568.1mRNA_Ecto-sp8_S_contig97941.31568.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig97941 1..444 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig97941.31568.1 ID=prot_Ecto-sp8_S_contig97941.31568.1|Name=mRNA_Ecto-sp8_S_contig97941.31568.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=148bp
RGSRWKIPKEEISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEI
GVHIADVTYFVRPNSDLDREARRRATTVYLVQQAIPMLPPLLCEELCSLN
PQVDRLTYSCIWRMNVDGTLVDKPAWFGRTVIRSCCKLDYQTAQHMIE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001900RNase_II/R
IPR012340NA-bd_OB-fold