prot_Ecto-sp8_S_contig979.31562.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig979.31562.1
Unique Nameprot_Ecto-sp8_S_contig979.31562.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length98
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig979.31562.1 vs. uniprot
Match: D7G7T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7T0_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 3.330e-7
Identity = 24/29 (82.76%), Postives = 24/29 (82.76%), Query Frame = 0 
Query:    1 MTEKRWGMPKPKVNKSRPVVNKMGARRHC 29
            MTEKRWGMPKPKV KSRPVVNKMG    C
Sbjct:    1 MTEKRWGMPKPKVKKSRPVVNKMGECVRC 29
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig979.31562.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7T0_ECTSI3.330e-782.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig979contigEcto-sp8_S_contig979:5143..7444 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig979.31562.1mRNA_Ecto-sp8_S_contig979.31562.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig979 5089..7461 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig979.31562.1 ID=prot_Ecto-sp8_S_contig979.31562.1|Name=mRNA_Ecto-sp8_S_contig979.31562.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=98bp
MTEKRWGMPKPKVNKSRPVVNKMGARRHCQATKNTGLPCTAAVKHGNNFC
GTHQPKVPKAGPICQATIASSRKPCPAQSKWGSRWCGKHFGKWHGTP*
back to top