prot_Ecto-sp8_S_contig977.31531.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig977.31531.1
Unique Nameprot_Ecto-sp8_S_contig977.31531.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length391
Homology
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BLAST of mRNA_Ecto-sp8_S_contig977.31531.1 vs. uniprot
Match: D8LLQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ3_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 5.270e-20
Identity = 51/91 (56.04%), Postives = 63/91 (69.23%), Query Frame = 0 
Query:    1 MHTKNVKFEVRKGTRMHFRAPGCTFERDQGDKTHIFDVNGNLSFHAHLHHSRDLGNTRPDDPHWMLRTSPDANVTTLGGSSLHFSETSVIV 91
            ++TKN++F VRKG +M FRAP  TFER+QGD   IF+V+G L      H   DL NTR DDPH  +R SPD ++ T G S+L FSETSVIV
Sbjct:  299 LYTKNLRFNVRKGEKMKFRAPALTFEREQGDTAEIFNVDGELHLRGDQHRFDDLVNTRTDDPHDTIRGSPDGDIITYGVSTLRFSETSVIV 389
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BLAST of mRNA_Ecto-sp8_S_contig977.31531.1 vs. uniprot
Match: D8LLQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ0_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 8.390e-10
Identity = 39/61 (63.93%), Postives = 43/61 (70.49%), Query Frame = 0 
Query:  246 PSPSTTGGDTIAATNQGLLPIDDIQNTRASALYTCDQLQASRTPVYGIVVVRDHVICEETR 306
            PS S TG +T A T+QGL  IDDI N  AS L +CD L A  TPVYGIVVV DHVIC+E R
Sbjct:  755 PSSSVTGDNTDAGTHQGLPRIDDIDNIVASTLNSCDDLTAGWTPVYGIVVVTDHVICQEAR 815
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BLAST of mRNA_Ecto-sp8_S_contig977.31531.1 vs. uniprot
Match: A0A6H5L206_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L206_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.890e-9
Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = 0 
Query:    1 MHTKNVKFEVRKGTRMHFRAPGCTFERDQGDKTHIFDVNGNLSFHAHLHHSRDLGNTR 58
            ++T+NV+F VRKG +M FRAP  TFERDQGD   IF+VNG L      H   DL NTR
Sbjct:  307 LYTRNVRFSVRKGEKMKFRAPALTFERDQGDTAEIFNVNGELHLRGDQHRFDDLVNTR 364
[Close]
BLAST of mRNA_Ecto-sp8_S_contig977.31531.1 vs. uniprot
Match: A0A6H5L8D9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D9_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.430e-8
Identity = 43/107 (40.19%), Postives = 56/107 (52.34%), Query Frame = 0 
Query:    1 MHTKNVKFEVRKGTRMHFRAPGCTFERDQGDKTHIFDVNGNLSFHAHLHHSRDLGNTRPDDPHWMLRTSPDANVTTLGGSSLHFSETSVIVVAG--HTNAHASGNDN 105
            ++TKNV+F VRKG +MH RAP  TFER+Q                              DDPH  +  SPD ++ T G S+L FSETSVIV A    T+ + +G+DN
Sbjct:  318 LYTKNVRFSVRKGEKMHIRAPALTFEREQ------------------------------DDPHDTIHGSPDGDIITYGVSTLRFSETSVIVDAAPADTDTYDNGSDN 394
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig977.31531.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LLQ3_ECTSI5.270e-2056.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LLQ0_ECTSI8.390e-1063.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L206_9PHAE1.890e-956.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8D9_9PHAE1.430e-840.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 348..368
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..347
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 369..390

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig977contigEcto-sp8_S_contig977:1678..3803 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig977.31531.1mRNA_Ecto-sp8_S_contig977.31531.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig977 1678..3803 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig977.31531.1 ID=prot_Ecto-sp8_S_contig977.31531.1|Name=mRNA_Ecto-sp8_S_contig977.31531.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=391bp
MHTKNVKFEVRKGTRMHFRAPGCTFERDQGDKTHIFDVNGNLSFHAHLHH
SRDLGNTRPDDPHWMLRTSPDANVTTLGGSSLHFSETSVIVVAGHTNAHA
SGNDNVDHHSSASPPFADDKFSVLQQKEPRSSTEQSSTNGPRDNANSGGH
SDSGTKDNTNLSSEQHQHRHQHRHQHKQHQHKQRQQHLQHQDDDPPSAPI
TSSSSTMGLDDSNPNPSQQQQQQQQQPHITNHIDTPNSSPQPSNVPSPST
TGGDTIAATNQGLLPIDDIQNTRASALYTCDQLQASRTPVYGIVVVRDHV
ICEETRVSTPVVLDLVFKEAHATVSSSSSLSLSLSLSLSLSLSRSCSLSL
ALFSLFHVSLACWVAAPFHGPCIQHTRSWTRRAVLYGGVG*
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