prot_Ecto-sp8_S_contig976.31516.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig976.31516.1
Unique Nameprot_Ecto-sp8_S_contig976.31516.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length132
Homology
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BLAST of mRNA_Ecto-sp8_S_contig976.31516.1 vs. uniprot
Match: D7G4F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F3_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 1.560e-18
Identity = 40/62 (64.52%), Postives = 50/62 (80.65%), Query Frame = 0 
Query:    1 MRDGMIAMAPPGDRHEALESLNKEYGETISLQQWYQCVDKAVGIRVGGTRMPDRPDLCWEKT 62
            +RDG IAMAPPGDR +AL++LNKE+ +T++LQQW QCVD+ VG R     MP+RPDL WEKT
Sbjct:  489 LRDGGIAMAPPGDRQKALDALNKEHRQTLTLQQWEQCVDEVVGRREKVFTMPERPDLRWEKT 550
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BLAST of mRNA_Ecto-sp8_S_contig976.31516.1 vs. uniprot
Match: UPI0000161E58 (hypothetical protein n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E58)

HSP 1 Score: 70.9 bits (172), Expect = 1.170e-11
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0 
Query:    1 MRDGMIAMAPPGDRHEALESLNKEYGETISLQQWYQCVDKAVGIRVGGTRMPDRPDLCWEKT 62
            M+ G I MAP GDR EAL++LN+ +G +++L QW QCVD+AVG R  G  + + P L WE T
Sbjct:  164 MKLGGIGMAPTGDRQEALDALNETHGLSLTLPQWDQCVDEAVGCREDGGSLTELPTLHWEMT 225
[Close]
BLAST of mRNA_Ecto-sp8_S_contig976.31516.1 vs. uniprot
Match: D8LPI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPI9_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 1.550e-11
Identity = 33/62 (53.23%), Postives = 41/62 (66.13%), Query Frame = 0 
Query:    1 MRDGMIAMAPPGDRHEALESLNKEYGETISLQQWYQCVDKAVGIRVGGTRMPDRPDLCWEKT 62
            M+ G I  A  GDR EAL++LNKEY  +++LQQW QCVD+AVG R  G    + P L WE T
Sbjct:    1 MKLGGIGTASAGDRQEALDALNKEYDLSLTLQQWDQCVDEAVGCREDGGSQTELPTLHWENT 62
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig976.31516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4F3_ECTSI1.560e-1864.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI0000161E581.170e-1151.61hypothetical protein n=1 Tax=Ectocarpus siliculosu... [more]
D8LPI9_ECTSI1.550e-1153.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig976contigEcto-sp8_S_contig976:9947..10342 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig976.31516.1mRNA_Ecto-sp8_S_contig976.31516.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig976 8312..10393 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig976.31516.1 ID=prot_Ecto-sp8_S_contig976.31516.1|Name=mRNA_Ecto-sp8_S_contig976.31516.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=132bp
MRDGMIAMAPPGDRHEALESLNKEYGETISLQQWYQCVDKAVGIRVGGTR
MPDRPDLCWEKTGPGDGGVGDAPVGGRDEAGEGDGVGGRDEETTPQAAEG
GGSEGTQGALGSGGGGGETESDINADEDDGE*
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