prot_Ecto-sp8_S_contig976.31514.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig976.31514.1
Unique Nameprot_Ecto-sp8_S_contig976.31514.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length320
Homology
BLAST of mRNA_Ecto-sp8_S_contig976.31514.1 vs. uniprot
Match: D7FUC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC6_ECTSI)

HSP 1 Score: 434 bits (1117), Expect = 2.500e-147
Identity = 214/293 (73.04%), Postives = 254/293 (86.69%), Query Frame = 0
Query:    1 MKVPGCPIFRRRVDHIMDVVTHNALQPVMDLVSEEEQEMCLDVLRSVDRNTIVDDVLRRKEMDNGAILKVEESRLMPRNYAVGIRKIVSRLEHRVTAKKVSLFSQGLTLIDAVLNACLRCQDLLGMYAFASYMMTFTSPTGTLTEVMEVVLPLTAKNTRASDDTVQGTACVHLKRTEMRRWLAVMLVLLRPLMREHLRASGRHLCLEVGPFDGRGQLFSTTKLLDLFRCAGQHFLGLPRWGYNINRSIHTSNATFLALARDEGVDTPWVERTFGKARQSHARTVGTYSSTEAR 293
            MK+PGCPIFR+R +H++DVV HNAL+PV DL+SE+E +MCLDV RS DRNT+VDDVLR  ++D  AIL++EESRLMP+ YAV I +IV RL+  VTA+ V+LFSQGLTL+DAVLNACLRCQDLLGM+AFASYMMTF SP    TEVMEVVLPLTAK+TRASD ++QGTACVHLKR +M RWLAV+LVLLRPLMREHL+ SG+ LCLEVGPFD  G+LF+ +KLLDLF+ AG+HFLGLPRWGYNINR++HTSNATFLALA+ EG + PWVE+ FG+ARQS+ RT GT SSTE R
Sbjct:  257 MKIPGCPIFRKRTNHMVDVVQHNALEPVTDLISEDEVKMCLDVRRSTDRNTMVDDVLRVNDLDYNAILEIEESRLMPQKYAVAIGEIVRRLKPDVTAEMVALFSQGLTLVDAVLNACLRCQDLLGMFAFASYMMTFVSPKKAPTEVMEVVLPLTAKDTRASDGSIQGTACVHLKRPDMHRWLAVLLVLLRPLMREHLQGSGKQLCLEVGPFDANGKLFTNSKLLDLFQYAGKHFLGLPRWGYNINRTVHTSNATFLALAQGEGSNAPWVEKVFGQARQSNNRTQGTCSSTERR 549          
BLAST of mRNA_Ecto-sp8_S_contig976.31514.1 vs. uniprot
Match: D8LH64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH64_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 3.750e-6
Identity = 52/185 (28.11%), Postives = 85/185 (45.95%), Query Frame = 0
Query:   18 DVVTHNALQPVMDLVSEEEQ--EMCLDVLRSVDRNTIVDDVLRRKEMDNGAILKVEESRLMPRNYAVGIRKIVSRLE--HRVTAKKVSLFSQGLTLIDAVLNACLRCQDLLGMYAFASYMMTFTSPTGTLTEVMEVVLPLTAKNTRASDDTVQGTACVHLKRTEMRRWLAVMLVLLRPLMREHLR 198
            ++V+ N +   M+ + +++   +MC +VL            +  ++ +N       E  L P  +   I  IV  L   ++VT   +SL S  LT++D++L A LR QD+LG  A   Y M      G    +   +LP   KN +A +++  G    H K  +     AVM V+ R +MR  LR
Sbjct: 1038 ELVSRNGIDSFMEKLPDKDDIVKMCNEVLE-----------MNPRKREN-------EDHLCPPEFKQRIEAIVDELVEGNKVTRSDISLLSCSLTVLDSLLTAALRKQDILGQLAKDLYRMKCKDVYGNDVAITRCLLPRYFKNKKALENSTCGVVVNHTKHEKCEGAYAVMAVIGRKVMRSFLR 1204          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig976.31514.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUC6_ECTSI2.500e-14773.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LH64_ECTSI3.750e-628.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig976contigEcto-sp8_S_contig976:6295..7254 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig976.31514.1mRNA_Ecto-sp8_S_contig976.31514.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig976 5161..7254 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig976.31514.1 ID=prot_Ecto-sp8_S_contig976.31514.1|Name=mRNA_Ecto-sp8_S_contig976.31514.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=320bp
MKVPGCPIFRRRVDHIMDVVTHNALQPVMDLVSEEEQEMCLDVLRSVDRN
TIVDDVLRRKEMDNGAILKVEESRLMPRNYAVGIRKIVSRLEHRVTAKKV
SLFSQGLTLIDAVLNACLRCQDLLGMYAFASYMMTFTSPTGTLTEVMEVV
LPLTAKNTRASDDTVQGTACVHLKRTEMRRWLAVMLVLLRPLMREHLRAS
GRHLCLEVGPFDGRGQLFSTTKLLDLFRCAGQHFLGLPRWGYNINRSIHT
SNATFLALARDEGVDTPWVERTFGKARQSHARTVGTYSSTEARFSSQEGM
DHAAGGIQSTCVAIEAAAKA
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