prot_Ecto-sp8_S_contig9757.31509.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9757.31509.1
Unique Nameprot_Ecto-sp8_S_contig9757.31509.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length154
Homology
BLAST of mRNA_Ecto-sp8_S_contig9757.31509.1 vs. uniprot
Match: D7G0I5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0I5_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 2.770e-95
Identity = 150/153 (98.04%), Postives = 151/153 (98.69%), Query Frame = 0
Query:    1 EEADNDLTEDLFGGGGARGQGAGGGLSGLALTNMQDHVKLAIELAERMDSSKPAHMTAFLKELVTKLSSKMTADGLTDLVNHTTMFRDEKRQAEERIASAKANKTNVIANQRANKKKSIKKKKAHSDVFGGDFDGDGIDSVGMDYESKYDDFM 153
            EEADNDLTEDLFGGGGARGQGAGGGLSGLAL NMQDHVKLAIELAERMDSSKPAHMTAFLKELVTKLS KMTADGLTDLVNHTTMFRDEKRQAEERIASAKANKTNVIANQRANKKKSIKKKKAHSDVFGGDFDGDGID+VGMDYESKYDDFM
Sbjct:   88 EEADNDLTEDLFGGGGARGQGAGGGLSGLALKNMQDHVKLAIELAERMDSSKPAHMTAFLKELVTKLSPKMTADGLTDLVNHTTMFRDEKRQAEERIASAKANKTNVIANQRANKKKSIKKKKAHSDVFGGDFDGDGIDTVGMDYESKYDDFM 240          
BLAST of mRNA_Ecto-sp8_S_contig9757.31509.1 vs. uniprot
Match: A0A836CNA4_9STRA (Eukaryotic translation initiation factor 3 subunit J n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNA4_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 8.320e-21
Identity = 66/167 (39.52%), Postives = 95/167 (56.89%), Query Frame = 0
Query:    1 EEADNDLTEDLFGGGG---ARGQGAGGGLSGLALTNMQDHVKLAIELAERMD----SSKPAHMTAFLKELVTKLSSKMTADGLTDLVNHTTMFRDEKRQAEERIASAKANKTNVIANQRA-----NKKKSIKKKKAHSDVFGGDFDG--DGIDSVGMDYESKYDDFM 153
            EE+D+ LTEDLFGGGG   A    A  G+ G+ L   QDHVKLA++L E++     S    ++ A LKEL+T++  K++ +    L  H   F+D K  AE++  +       ++  Q+A     N +KS  KKK H+D+FGG +DG  D  D +  +YE  YDDFM
Sbjct:   85 EESDHALTEDLFGGGGTAEAAEAPAQAGVEGIPLKTTQDHVKLALDLGEKLSKDGSSGSSGNILALLKELITRVEGKLSLEETNQLALHLNKFKDAKMVAEQKRQA-------ILKKQKAXXXXRNAEKS--KKKQHADLFGGAYDGVGDQYDELATNYEDAYDDFM 242          
BLAST of mRNA_Ecto-sp8_S_contig9757.31509.1 vs. uniprot
Match: B7G7B8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7B8_PHATC)

HSP 1 Score: 70.5 bits (171), Expect = 1.120e-11
Identity = 51/156 (32.69%), Postives = 85/156 (54.49%), Query Frame = 0
Query:    1 EEADNDLTEDLFGGGGAR-GQGAGGGLSGLA-----LTNMQDHVKLAIELAERMDSSKPAHMTA-FLKELVTKLSSKMTADGLTDLVNHTTMFRDEKRQAEERIASAKANKTNVIANQRANKKKSIKKKKAHSDVFGGDFDGDGIDSVGMDYESKY 149
            EEADN LT+DLFGG  A+ G+GA GG +  A     + +++DH+K A ++AE M      H+ A F KEL+ +    +  D +T+++    + ++EK QA +R+   K        +++A+K    K  +   + FG + + D  D +G DYE  +
Sbjct:  109 EEADNALTDDLFGGVDAKAGKGATGGAAAAAGDKVIMKDVKDHLKHARKVAECMQGHGKIHLAAAFFKELLQQSKDVLDDDAITEIIKTCNVIKNEKVQAAKRVTKVKGQ---AQKSKKADKAAEAKALQKQVETFGANDEYDEYDHIGADYEDAF 261          
BLAST of mRNA_Ecto-sp8_S_contig9757.31509.1 vs. uniprot
Match: A0A6U5PFI3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5PFI3_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 5.950e-6
Identity = 42/153 (27.45%), Postives = 79/153 (51.63%), Query Frame = 0
Query:    1 EEADNDLTEDLFGGGGARGQGAG---GGLSGLALTNMQDHVKLAIELAERMDSSKPAHM-TAFLKELVTKLSSKMTADGLTDLVNHTTMFRDEKRQAEERIASAKANKTNVIANQRANKKKSIKKKKAHSDVFGGDFDGDGIDSVGMDYESKY 149
            E+ADN LT+DLFG    R +  G   G    + + +++DH+K A ++ + + + K  H+ TAFLKE + +    +    +++L+    + ++EK Q  +R    +A K+      + +K    K +K   +++G + D D  D +G  YE  +
Sbjct:  113 EDADNALTDDLFGTVDNRSKATGTSQGAGDTVVMKDLKDHLKHAKKVGQCIRTHKNVHLATAFLKEAIQECKDVLDDAAISELIKTCNVIKNEKVQNSKRKVKGQAQKS-----AKRDKAAEAKARKLQEELYGNNDDYDDYDEMGGAYEDAF 260          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9757.31509.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G0I5_ECTSI2.770e-9598.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CNA4_9STRA8.320e-2139.52Eukaryotic translation initiation factor 3 subunit... [more]
B7G7B8_PHATC1.120e-1132.69Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A6U5PFI3_9STRA5.950e-627.45Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 90..110
IPR013906Eukaryotic translation initiation factor 3 subunit JPFAMPF08597eIF3_subunitcoord: 1..153
e-value: 3.0E-19
score: 69.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9757contigEcto-sp8_S_contig9757:1..2283 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9757.31509.1mRNA_Ecto-sp8_S_contig9757.31509.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9757 1..2283 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9757.31509.1 ID=prot_Ecto-sp8_S_contig9757.31509.1|Name=mRNA_Ecto-sp8_S_contig9757.31509.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=154bp
EEADNDLTEDLFGGGGARGQGAGGGLSGLALTNMQDHVKLAIELAERMDS
SKPAHMTAFLKELVTKLSSKMTADGLTDLVNHTTMFRDEKRQAEERIASA
KANKTNVIANQRANKKKSIKKKKAHSDVFGGDFDGDGIDSVGMDYESKYD
DFM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013906eIF3j