prot_Ecto-sp8_S_contig975.31498.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig975.31498.1
Unique Nameprot_Ecto-sp8_S_contig975.31498.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length446
Homology
BLAST of mRNA_Ecto-sp8_S_contig975.31498.1 vs. uniprot
Match: D7G4J1_ECTSI (Smr domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4J1_ECTSI)

HSP 1 Score: 531 bits (1367), Expect = 6.980e-187
Identity = 264/299 (88.29%), Postives = 277/299 (92.64%), Query Frame = 0
Query:  146 MSQEGEWESALEMLQCIRDEGMKPSMSTHMDVMSVCRRALEWDQASKAYREMIEAHLTDNPFDDMACQDYEDESNHVLARACGIVAGMQADAGIKPNNGTYRALLQLCKDEGSWETAILLLEHSRRSKTKLNLFSFDLLVTTVAEQGYKEVSTMLYELGVVDADRALLETEGNGDGDG----EWPKWPLKVGRTGGVILELHELTQSIALETVQVALLDVIRRPLRRPYWSGDKRWRIVTGMGNNSKDGEAVIKPAVVELLEDLGLRPEFQQGNEGCVELKPASLEAYIRRMKRRGAAA 440
            MS+EG+WE ALEMLQ IRD+GMKPSMSTHMDV+SVCRRALEWDQASKAYREMIEAHLTD+PFDDMACQDYEDESNHV ARACGIVAGMQADAGIKPNNGTYRALLQLCKDEGSWE AILLLEHSRRSK KLNLFSFDLL+TTVA+QGYKEVSTMLYELGVVDADRALLETEGN         EWPKWPLKVGRTGG ILELH+LTQ IALETVQVALLDVIRRPLRRPYWSGDKRWRI+TGMGNNSKD EA+IKPAVVELLEDLGLRPEFQQ NEGCVELKPA+LEAYIRR   + +AA
Sbjct:    1 MSREGDWEGALEMLQRIRDKGMKPSMSTHMDVISVCRRALEWDQASKAYREMIEAHLTDHPFDDMACQDYEDESNHVFARACGIVAGMQADAGIKPNNGTYRALLQLCKDEGSWEAAILLLEHSRRSKAKLNLFSFDLLITTVAKQGYKEVSTMLYELGVVDADRALLETEGNXXXXXXXXVEWPKWPLKVGRTGGAILELHDLTQGIALETVQVALLDVIRRPLRRPYWSGDKRWRIITGMGNNSKDREAIIKPAVVELLEDLGLRPEFQQRNEGCVELKPANLEAYIRRQVTKASAA 299          
BLAST of mRNA_Ecto-sp8_S_contig975.31498.1 vs. uniprot
Match: D7G4I1_ECTSI (Predicted mitochondrial protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I1_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 1.450e-41
Identity = 101/302 (33.44%), Postives = 160/302 (52.98%), Query Frame = 0
Query:  132 VDPAAAE-QETAIKRMSQEGEWESALEMLQCIRDEGMKPSMSTHMDVMSVCRRALEWDQASKAYREMIEAHLTDNPFDDMACQDYEDESNHVLARACGIVAGMQADAGIKPNNGTYRALLQLCKDEGSWETAILLLEHSRRSKTKLNLFSFDLLVTTVAEQGYKEVSTMLYELGVVDADRALLETEGNGDGDGEWPKWPLKVGRTGGVILELHELTQSIALETVQVALLDVIRRPLRRPYWSGDKRWRIVTGMGNNSKDGEAVIKPAVVELLEDLGLRPEFQQGNEGCVELKPASLEAYIRR 432
            V P  AE Q+ A    +  G+WE ++++++ +RD    PS++ ++  +  CR+A E+D AS    +M +  L ++     A   + +       +    +A M     I+P   TYRA++ L   E  W+ ++LL+EH +R+      F +D + + + + G+ E++TM++E  + D    L     N     E               L+LH  T S AL  V+V LLD+ R+P  R +    +   I+TGMGNNSKDGEAVIKP V+ELL D+GL P   + NEGC+ L+PA L+AY+ R
Sbjct:  148 VAPEGAEKQDEAAVEYAVGGDWEKSVQLIKAMRDSDFVPSVNAYVATIEACRKAGEYDHASTLLSDMNKVCLPEDLIKAYAAP-HPNAPGVTQTQKVFCLAMMMRQDKIEPFEETYRAIMGLASKEKLWQVSLLLVEHLKRNGLVPGKFVYDEICSVLFKTGHPEMATMIFEDALGDKIEEL-----NSFAPPE---------------LDLHNHTVSTALAAVRVVLLDMARKPATRTFHDPAQELLIITGMGNNSKDGEAVIKPRVMELLSDMGLEPSMMRNNEGCIVLQPADLQAYMAR 428          
BLAST of mRNA_Ecto-sp8_S_contig975.31498.1 vs. uniprot
Match: A0A835YUL6_9STRA (Smr domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUL6_9STRA)

HSP 1 Score: 124 bits (311), Expect = 5.450e-28
Identity = 94/351 (26.78%), Postives = 166/351 (47.29%), Query Frame = 0
Query:  127 PSVSRVDPAAAEQETAIKRMSQEGEWESALEMLQCIRDEGMKPSMSTHMDVMSVCRRALEWDQASKAYREMIEAHLTDNPFDDMACQDYEDESN---------------HVLARACGIVAGMQADAGIKPNNGTYRALLQLCKDEGSWETAILLLEHSRRSKTKLNLFSFDLLVTTVAEQGYKEVSTMLYELGVVDADRALLETEGNGDGDGEWPKWPLKVGRTGGVILELHELTQSIALETVQVALLDVIRRPLRRPYWSGDKRWRIVTGMGNNSKDGEAVIKPAVVELLE-DLGLRPEF----------------QQGNEGCVELKPASLEAYIRRMKRRGAAAASTPP 445
            P  +   P  A+   AIK+ +  GEW  A+ ++  +R+  + PS+  + D ++  RR LE+D+A     +M +A +  + F   A  D  D S+                       ++  M+ D  ++P+  TYRA++ +C  +  W  ++LLLEH R    +   F ++ + T +  +G  +++ ++YE       R+L        G+G +  W     +     ++LH  T + A   V+ AL D++R+P  RP+        I+TG+G  S++G AVIKPA++++L  +L +  E                 Q+ N GCVE++P  L+A+ R   R  A  A+T P
Sbjct:   13 PPGAEAAPETAKYNDAIKKYASGGEWAKAVVLIDKMREINLSPSIEAYGDTITALRRGLEFDRADALLADMYDACMPADLFAKYAAADPSDASSTQTQCVFALENXXXXXXXXXXXXLLLCMRTDQ-LEPDVDTYRAVMGMCTKDRLWHLSLLLLEHMRLRGVQPGKFIYNEICTVLDMEGKHDLAEIVYE-------RSL--------GEGVFEPWIEDDNK-----VDLHSFTLNTARAAVRSALTDMLRQPSGRPFHDPAAPMHIITGVGRRSEEGVAVIKPAILDMLNVELQIPAEXXXXXXXXXXXXXXXXVQKHNPGCVEIQPQHLQAWARA--RLAAVGATTDP 340          
BLAST of mRNA_Ecto-sp8_S_contig975.31498.1 vs. uniprot
Match: A0A812I2Z0_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812I2Z0_9DINO)

HSP 1 Score: 65.9 bits (159), Expect = 7.320e-8
Identity = 77/274 (28.10%), Postives = 118/274 (43.07%), Query Frame = 0
Query:  168 KPSMSTHMDVMSVCRRALEWDQASKAYREMIEAHLT--DNPFDDMACQDYEDESNHVLARACGIVAGMQADAGIKPNNGTYRALLQLCKDEGSWETAILLLEHSRRSKTKLNLFSFDLLVTTVAEQGYKEVSTMLYELGVVDADRAL--LETEGNGDGDGEWPKWPLKVGRTGGVILELHELTQSIALETVQVALLDVIR-RPLRRPYWSGDKRWRIVTGMGNNSKDGEAVIKPAVVELLEDLGLRPEFQQGNEGCVELKPASLEAYIRRMKRR 436
            +P   ++   MS C RA  W    + Y +M+E  L   D  F+ + C+ +E  S+    ++C  +    + AG + +  T   ++  C+    W   + LL     S   L+       +T+    G    +   Y       +R L  L   G   G G    W  + GR  G  L+LH L    A   V  ALLD    +P   P W       +VTG GN+S +GE+V++PAV++LL++LGL       NEG V L    L  +I   + R
Sbjct:  284 RPDSISYNTAMSACFRASRWQCVFELYTQMLEKKLNVLDGTFNAL-CRVFEHNSSW---QSCLQILEEASLAGPQLSQLTLSVVVSACQKSTKWHQVLQLLGMMEASGMVLDDVFQAAGMTSHVYMGDLATALAWYR------ERPLRGLRLGGRKAGAG----W-FEHGRRWGH-LDLHGLQPEEARLAVCCALLDATMVKPGMLPSWG----LVLVTGRGNHS-EGESVVRPAVLQLLKELGLAARVDPYNEGRVVLPARELLTFICTAENR 536          
BLAST of mRNA_Ecto-sp8_S_contig975.31498.1 vs. uniprot
Match: A0A812VXG1_9DINO (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812VXG1_9DINO)

HSP 1 Score: 58.5 bits (140), Expect = 1.570e-5
Identity = 75/274 (27.37%), Postives = 115/274 (41.97%), Query Frame = 0
Query:  168 KPSMSTHMDVMSVCRRALEWDQASKAYREMIEAHLT--DNPFDDMACQDYEDESNHVLARACGIVAGMQADAGIKPNNGTYRALLQLCKDEGSWETAILLLEHSRRSKTKLNLFSFDLLVTTVAEQGYKEVSTMLYELGVVDADRAL--LETEGNGDGDGEWPKWPLKVGRTGGVILELHELTQSIALETVQVALLDVIR-RPLRRPYWSGDKRWRIVTGMGNNSKDGEAVIKPAVVELLEDLGLRPEFQQGNEGCVELKPASLEAYIRRMKRR 436
            KP   ++   MS C R   W    + Y  M+E  L   D  F+ + C+ +E+ S+    ++C  +    + AG   +  T   ++  C+                 S T L+       +T+    G    +   Y       +R L  L   G   G G    W L+ GR  G  L+LH L    A   V  ALLD    +P   P W       +VTG G++S +GE+V++PAV++LL +LGL       NEG V L    L  +I  +++R
Sbjct:  303 KPDSISYNTAMSACFRGSRWQSVFELYARMLERKLNALDGTFNTL-CRVFENNSSW---QSCLQILEDASLAGTPLSQLTLSVVVSACQKSTXXXXXXXXXGMMEASGTVLDDVFQAAGMTSHVHMGDLATALAWYR------ERPLRGLRLGGRKAGAG----W-LEPGRRWGY-LDLHGLQPEEARLAVCCALLDATMVKPGMLPSWG----LVLVTGRGSHS-EGESVLRPAVLQLLLELGLAARVDPYNEGRVILPARELLNFICTVEKR 555          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig975.31498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G4J1_ECTSI6.980e-18788.29Smr domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7G4I1_ECTSI1.450e-4133.44Predicted mitochondrial protein n=2 Tax=Ectocarpus... [more]
A0A835YUL6_9STRA5.450e-2826.78Smr domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A812I2Z0_9DINO7.320e-828.10Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A812VXG1_9DINO1.570e-527.37Hypothetical protein n=2 Tax=Symbiodinium TaxID=29... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 59..79
NoneNo IPR availableGENE3D3.30.1370.110coord: 334..422
e-value: 2.6E-10
score: 42.1
IPR002625Smr domainSMARTSM00463SMR_2coord: 337..422
e-value: 0.0014
score: 27.9
IPR002625Smr domainPROSITEPS50828SMRcoord: 340..424
score: 15.458
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 139..215
e-value: 6.3E-7
score: 31.2
coord: 216..327
e-value: 3.0E-6
score: 29.0
IPR036063Smr domain superfamilySUPERFAMILY160443SMR domain-likecoord: 339..419

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig975contigEcto-sp8_S_contig975:6605..13076 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig975.31498.1mRNA_Ecto-sp8_S_contig975.31498.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig975 6109..13126 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig975.31498.1 ID=prot_Ecto-sp8_S_contig975.31498.1|Name=mRNA_Ecto-sp8_S_contig975.31498.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=446bp
MQFLIRRLGPGVNSRKTLACVLTPPPVGGTRQAVTCFSAPSAAAPTTAPP
TQRYYHHQQQQQQQQRQQLQRQSRNLTSSGRYQAPRAVPKNVLRRRSSTA
SEATAATAAEQQGGSPASGGGGVPPFPSVSRVDPAAAEQETAIKRMSQEG
EWESALEMLQCIRDEGMKPSMSTHMDVMSVCRRALEWDQASKAYREMIEA
HLTDNPFDDMACQDYEDESNHVLARACGIVAGMQADAGIKPNNGTYRALL
QLCKDEGSWETAILLLEHSRRSKTKLNLFSFDLLVTTVAEQGYKEVSTML
YELGVVDADRALLETEGNGDGDGEWPKWPLKVGRTGGVILELHELTQSIA
LETVQVALLDVIRRPLRRPYWSGDKRWRIVTGMGNNSKDGEAVIKPAVVE
LLEDLGLRPEFQQGNEGCVELKPASLEAYIRRMKRRGAAAASTPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002625Smr_dom
IPR011990TPR-like_helical_dom_sf
IPR036063Smr_dom_sf