prot_Ecto-sp8_S_contig9696.31407.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9696.31407.1
Unique Nameprot_Ecto-sp8_S_contig9696.31407.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length70
Homology
BLAST of mRNA_Ecto-sp8_S_contig9696.31407.1 vs. uniprot
Match: D8LPY7_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY7_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 2.330e-38
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0
Query:    1 MRGRDEGPGREEPDIPFPFEPYDVQKQLMRKIYSTLENGGIGIFESPTGTGKSLSVICSALQWLKDAEAK 70
            MRGRDEGP REEPDIPFPFEPYDVQKQLMRKIYSTLENGGIGIFESPTGTGKSLSVICSALQWLKDAEAK
Sbjct:    9 MRGRDEGPPREEPDIPFPFEPYDVQKQLMRKIYSTLENGGIGIFESPTGTGKSLSVICSALQWLKDAEAK 78          
BLAST of mRNA_Ecto-sp8_S_contig9696.31407.1 vs. uniprot
Match: A0A4Z2IRY1_9TELE (Putative ATP-dependent RNA helicase DDX11-like protein 8 n=1 Tax=Liparis tanakae TaxID=230148 RepID=A0A4Z2IRY1_9TELE)

HSP 1 Score: 88.2 bits (217), Expect = 7.930e-21
Identity = 37/56 (66.07%), Postives = 45/56 (80.36%), Query Frame = 0
Query:   15 IPFPFEPYDVQKQLMRKIYSTLENGGIGIFESPTGTGKSLSVICSALQWLKDAEAK 70
             PFP++PYD+Q+Q M+ +Y TLE G +GIFESPTGTGKSLS+IC AL WL D E K
Sbjct:   16 FPFPYQPYDIQEQFMQALYKTLEQGKVGIFESPTGTGKSLSLICGALSWLTDHEEK 71          
BLAST of mRNA_Ecto-sp8_S_contig9696.31407.1 vs. uniprot
Match: Q0VFS5_XENTR (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=Q0VFS5_XENTR)

HSP 1 Score: 86.7 bits (213), Expect = 1.940e-20
Identity = 37/56 (66.07%), Postives = 44/56 (78.57%), Query Frame = 0
Query:   15 IPFPFEPYDVQKQLMRKIYSTLENGGIGIFESPTGTGKSLSVICSALQWLKDAEAK 70
             PFP+EPY +Q+Q M K+Y  LE G +GIFESPTGTGKSLS+IC AL WL+D E K
Sbjct:   13 FPFPYEPYPIQEQFMEKLYQALEAGKVGIFESPTGTGKSLSLICGALTWLQDFETK 68          
BLAST of mRNA_Ecto-sp8_S_contig9696.31407.1 vs. uniprot
Match: A0A835YWY4_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWY4_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.930e-20
Identity = 40/58 (68.97%), Postives = 49/58 (84.48%), Query Frame = 0
Query:   13 PDIPFPFEPYDVQKQLMRKIYSTLENGGIGIFESPTGTGKSLSVICSALQWLKDAEAK 70
            P IPFPF PY+VQ+QLM  +Y+  E GGIGIFESPTGTGKSLS+IC+ALQWL  ++A+
Sbjct:   17 PSIPFPFPPYEVQQQLMTHLYTAFERGGIGIFESPTGTGKSLSIICAALQWLTVSDAR 74          
BLAST of mRNA_Ecto-sp8_S_contig9696.31407.1 vs. uniprot
Match: UPI000C6E49F0 (ATP-dependent DNA helicase DDX11-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E49F0)

HSP 1 Score: 91.3 bits (225), Expect = 7.440e-20
Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 0
Query:    7 GPGREEPDIPFPFEPYDVQKQLMRKIYSTLENGGIGIFESPTGTGKSLSVICSALQWLKDAEAK 70
            GP +     PFPF PYDVQ + M K+Y+TLE+G IGIFESPTGTGKSLS+IC A+ WLK+ E K
Sbjct:    3 GPAKSTSKFPFPFTPYDVQLEFMSKLYNTLEDGKIGIFESPTGTGKSLSLICGAVTWLKEHEKK 66          
BLAST of mRNA_Ecto-sp8_S_contig9696.31407.1 vs. uniprot
Match: A0A8K0A2R1_BRALA (DDX11 protein n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A8K0A2R1_BRALA)

HSP 1 Score: 91.3 bits (225), Expect = 7.450e-20
Identity = 39/55 (70.91%), Postives = 46/55 (83.64%), Query Frame = 0
Query:   14 DIPFPFEPYDVQKQLMRKIYSTLENGGIGIFESPTGTGKSLSVICSALQWLKDAE 68
            + PFPFEPYD+QK  M K+Y TLE G +GIFESPTGTGKSLS+IC AL+WL+D E
Sbjct:    6 EFPFPFEPYDIQKGFMTKLYQTLEEGKVGIFESPTGTGKSLSLICGALKWLQDHE 60          
BLAST of mRNA_Ecto-sp8_S_contig9696.31407.1 vs. uniprot
Match: A0A6P4ZTM8_BRABE (ATP-dependent DNA helicase DDX11-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZTM8_BRABE)

HSP 1 Score: 91.3 bits (225), Expect = 7.450e-20
Identity = 39/55 (70.91%), Postives = 46/55 (83.64%), Query Frame = 0
Query:   14 DIPFPFEPYDVQKQLMRKIYSTLENGGIGIFESPTGTGKSLSVICSALQWLKDAE 68
            + PFPFEPYD+QK  M K+Y TLE G +GIFESPTGTGKSLS+IC AL+WL+D E
Sbjct:    6 EFPFPFEPYDIQKGFMTKLYQTLEEGKVGIFESPTGTGKSLSLICGALKWLQDHE 60          
BLAST of mRNA_Ecto-sp8_S_contig9696.31407.1 vs. uniprot
Match: UPI0013902411 (ATP-dependent DNA helicase DDX11 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013902411)

HSP 1 Score: 90.9 bits (224), Expect = 1.020e-19
Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 0
Query:   15 IPFPFEPYDVQKQLMRKIYSTLENGGIGIFESPTGTGKSLSVICSALQWLKDAEAK 70
             PFPF PYD+Q++ M ++Y  LE GG+GIFESPTGTGKSLS+IC AL WL+D EAK
Sbjct:   24 FPFPFPPYDIQEEFMAELYKVLEKGGVGIFESPTGTGKSLSLICGALTWLRDHEAK 79          
BLAST of mRNA_Ecto-sp8_S_contig9696.31407.1 vs. uniprot
Match: A0A8J9YC34_9NEOP ((lesser marbled fritillary) hypothetical protein n=1 Tax=Brenthis ino TaxID=405034 RepID=A0A8J9YC34_9NEOP)

HSP 1 Score: 90.5 bits (223), Expect = 1.390e-19
Identity = 39/59 (66.10%), Postives = 47/59 (79.66%), Query Frame = 0
Query:   12 EPDIPFPFEPYDVQKQLMRKIYSTLENGGIGIFESPTGTGKSLSVICSALQWLKDAEAK 70
            +P   FPFEPYD+QK+ M+++Y T+EN  IGIFESPTGTGKSLS+ C ALQWLKD   K
Sbjct:    2 QPSFSFPFEPYDIQKKFMKELYFTIENKKIGIFESPTGTGKSLSICCGALQWLKDNNQK 60          
BLAST of mRNA_Ecto-sp8_S_contig9696.31407.1 vs. uniprot
Match: A0A1A8Q8L7_9TELE (DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 (Fragment) n=1 Tax=Nothobranchius rachovii TaxID=451742 RepID=A0A1A8Q8L7_9TELE)

HSP 1 Score: 87.8 bits (216), Expect = 1.550e-19
Identity = 36/55 (65.45%), Postives = 46/55 (83.64%), Query Frame = 0
Query:   14 DIPFPFEPYDVQKQLMRKIYSTLENGGIGIFESPTGTGKSLSVICSALQWLKDAE 68
            + PFP++PYD+Q+Q M+ +YSTL+ G +GIFESPTGTGKSLS+IC AL WL D E
Sbjct:    7 EFPFPYQPYDIQEQFMQALYSTLDQGKVGIFESPTGTGKSLSLICGALSWLTDHE 61          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9696.31407.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPY7_ECTSI2.330e-3898.57Helicase ATP-binding domain-containing protein n=1... [more]
A0A4Z2IRY1_9TELE7.930e-2166.07Putative ATP-dependent RNA helicase DDX11-like pro... [more]
Q0VFS5_XENTR1.940e-2066.07Helicase ATP-binding domain-containing protein (Fr... [more]
A0A835YWY4_9STRA2.930e-2068.97Helicase C-terminal domain-containing protein n=1 ... [more]
UPI000C6E49F07.440e-2064.06ATP-dependent DNA helicase DDX11-like n=1 Tax=Cent... [more]
A0A8K0A2R1_BRALA7.450e-2070.91DDX11 protein n=3 Tax=Branchiostoma TaxID=7737 Rep... [more]
A0A6P4ZTM8_BRABE7.450e-2070.91ATP-dependent DNA helicase DDX11-like n=1 Tax=Bran... [more]
UPI00139024111.020e-1967.86ATP-dependent DNA helicase DDX11 n=1 Tax=Nematoste... [more]
A0A8J9YC34_9NEOP1.390e-1966.10(lesser marbled fritillary) hypothetical protein n... [more]
A0A1A8Q8L7_9TELE1.550e-1965.45DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 (Frag... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 18..70
e-value: 1.3E-12
score: 49.2
NoneNo IPR availablePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 13..68
IPR028331ATP-dependent RNA helicase CHL1/DDX11PANTHERPTHR11472:SF41ATP-DEPENDENT DNA HELICASE DDX11-RELATEDcoord: 13..68
IPR014013Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-typePROSITEPS51193HELICASE_ATP_BIND_2coord: 11..70
score: 12.375
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9696contigEcto-sp8_S_contig9696:753..1500 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9696.31407.1mRNA_Ecto-sp8_S_contig9696.31407.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9696 753..1500 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9696.31407.1 ID=prot_Ecto-sp8_S_contig9696.31407.1|Name=mRNA_Ecto-sp8_S_contig9696.31407.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=70bp
MRGRDEGPGREEPDIPFPFEPYDVQKQLMRKIYSTLENGGIGIFESPTGT
GKSLSVICSALQWLKDAEAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028331CHL1/DDX11
IPR014013Helic_SF1/SF2_ATP-bd_DinG/Rad3
IPR027417P-loop_NTPase