prot_Ecto-sp8_S_contig9691.31400.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9691.31400.1
Unique Nameprot_Ecto-sp8_S_contig9691.31400.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length209
Homology
BLAST of mRNA_Ecto-sp8_S_contig9691.31400.1 vs. uniprot
Match: A0A6H5KBB2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBB2_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 1.370e-109
Identity = 162/167 (97.01%), Postives = 165/167 (98.80%), Query Frame = 0
Query:    1 KVTVGSLELSANKDIQQVIEIVEDFGKYRVLAKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALAIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNSKCSRELIRILKQANQKV 167
            +VTVGSLELSANKDIQQVIEIVEDFGKYRVL KHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPAL+IHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFA KNSKC+RELIRILKQANQKV
Sbjct:  228 QVTVGSLELSANKDIQQVIEIVEDFGKYRVLVKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAAKNSKCARELIRILKQANQKV 394          
BLAST of mRNA_Ecto-sp8_S_contig9691.31400.1 vs. uniprot
Match: D7FGZ5_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGZ5_ECTSI)

HSP 1 Score: 242 bits (618), Expect = 1.900e-74
Identity = 117/167 (70.06%), Postives = 136/167 (81.44%), Query Frame = 0
Query:    1 KVTVGSLELSANKDIQQVIEIVEDFGKYRVLAKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALAIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNSKCSRELIRILKQANQKV 167
            +VTVGSLEL+ANKDI+Q+IE  EDF KYR L+KHLQ+H + G+VL+FVETKKGCDALTRSLR +G+ A  IHGDK Q ERD VL DFK G   +LVATDVAARGLDVKDI+MVINFDFP  ME Y+HRIGRCGRAG KG A+SFF  KNS+  RELI+IL ++   V
Sbjct:  331 QVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQQHGHNGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHV 497          
BLAST of mRNA_Ecto-sp8_S_contig9691.31400.1 vs. uniprot
Match: A0A835ZEN1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEN1_9STRA)

HSP 1 Score: 230 bits (586), Expect = 2.340e-70
Identity = 107/167 (64.07%), Postives = 136/167 (81.44%), Query Frame = 0
Query:    1 KVTVGSLELSANKDIQQVIEIVEDFGKYRVLAKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALAIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNSKCSRELIRILKQANQKV 167
            +VTVGSL+LSANKDI+Q +E++ED+ KY  L ++L+EHN+ GRVLIFVETKKG D L RSLR +GWPA AIHGDK Q ERD  L +F+EGR  +LVATDVA+RG+DVKDIRMVINFDFP  +E Y+HRIGR  RAG KGT+++FF  KN++C+R+L +IL ++   V
Sbjct:  266 QVTVGSLDLSANKDIRQYVEVLEDWDKYSKLLQYLREHNDGGRVLIFVETKKGADQLVRSLRADGWPANAIHGDKTQDERDYALKEFREGRKNMLVATDVASRGIDVKDIRMVINFDFPNNLEDYIHRIGRTARAGAKGTSVAFFTSKNARCARDLAKILSESGNDV 432          
BLAST of mRNA_Ecto-sp8_S_contig9691.31400.1 vs. uniprot
Match: A0A7S2XX29_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX29_9STRA)

HSP 1 Score: 228 bits (581), Expect = 4.460e-69
Identity = 115/167 (68.86%), Postives = 133/167 (79.64%), Query Frame = 0
Query:    1 KVTVGSLELSANKDIQQVIEIVEDFGKYRVLAKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALAIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNSKCSRELIRILKQANQKV 167
            +VTVGSLELSANKD+ Q+IE +EDFGKYR L +HL+E     + LIFVETKKGCDALTRSLR +G+ A  IHGDKNQ ERD VL +F+E +  +LVATDVAARGLDVK+I  V+NFDFP  ME YVHRIGRCGRAG KGTAISFFA KN+K +RELI IL +    V
Sbjct:  315 QVTVGSLELSANKDVTQIIECLEDFGKYRKLQEHLREGGGHLKTLIFVETKKGCDALTRSLRMDGYHARCIHGDKNQDERDWVLREFREDKIELLVATDVAARGLDVKNIVRVVNFDFPGNMEDYVHRIGRCGRAGAKGTAISFFASKNAKMARELIEILNKNGSHV 481          
BLAST of mRNA_Ecto-sp8_S_contig9691.31400.1 vs. uniprot
Match: A0A6S9IVW3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9IVW3_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.270e-65
Identity = 109/169 (64.50%), Postives = 134/169 (79.29%), Query Frame = 0
Query:    1 KVTVGSLELSANKDIQQVIEIVEDFGKYRVLAKHLQEHNNA-GRVLIFVETKKGCDALTRSLRHEGWPALAIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAG-KNSKCSRELIRILKQANQKV 167
            +VTVGSL+L+ NKD+ QVIE+  D  KYR L KHL+E+  A  RVL+FVETKKGCD LTRSLR +G+ A A+HGDK+Q ERD VL +FK  +S +LVATDVAARGLDV DIRMV+NFDFP +MESY+HRIGR GRAG KG A+SFF   KN + +RELI IL++ +Q +
Sbjct:  141 QVTVGSLDLAGNKDVTQVIEVCSDQDKYRNLLKHLRENLTAKDRVLVFVETKKGCDMLTRSLRMDGFQARAMHGDKSQEERDWVLREFKSCQSTLLVATDVAARGLDVDDIRMVVNFDFPNDMESYIHRIGRTGRAGKKGVAVSFFVSQKNGRLARELIDILQRTHQNI 309          
BLAST of mRNA_Ecto-sp8_S_contig9691.31400.1 vs. uniprot
Match: A0A6S9KNI1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KNI1_HETAK)

HSP 1 Score: 218 bits (554), Expect = 4.540e-65
Identity = 107/167 (64.07%), Postives = 129/167 (77.25%), Query Frame = 0
Query:    1 KVTVGSLELSANKDIQQVIEIVEDFGKYRVLAKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALAIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNSKCSRELIRILKQANQKV 167
            +VTVGSLEL AN DI+QVIEI ED+GKY  L +  +      + L+FVETK+GCDALTRSLR +G+ A  IHGDK Q ERD VL +F+E    ILVATDVAARGLD++DI MV+NFDFP  ME YVHRIGRCGRAG KGTA+SFF  KN+K +REL+RI+++A   V
Sbjct:  310 QVTVGSLELQANADIEQVIEICEDYGKYAKLQETFRSRGGP-KALVFVETKRGCDALTRSLRLDGFHARCIHGDKTQQERDWVLKEFRENHCKILVATDVAARGLDIRDIEMVVNFDFPSNMEDYVHRIGRCGRAGAKGTAVSFFGSKNAKLTRELVRIMREAGSAV 475          
BLAST of mRNA_Ecto-sp8_S_contig9691.31400.1 vs. uniprot
Match: A0A6T5VY21_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A6T5VY21_9STRA)

HSP 1 Score: 209 bits (531), Expect = 9.530e-65
Identity = 100/167 (59.88%), Postives = 128/167 (76.65%), Query Frame = 0
Query:    1 KVTVGSLELSANKDIQQVIEIVEDFGKYRVLAKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALAIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNSKCSRELIRILKQANQKV 167
            +V VGSLEL AN +IQQ++E+V D+ KY  L  HLQ  N+  +V+IFVETKKGCD LTRSLR + +PA A+HGDK+Q ERD  L +FK GRS IL+ATDVAARGLDVKD+ +V+NFD P  +E Y+HRIGR GRAG KG ++SFF  K++K + EL+ IL +A Q +
Sbjct:   32 QVHVGSLELRANVNIQQIVEVVTDYAKYDRLTYHLQNFNDGSKVIIFVETKKGCDQLTRSLRMQHFPARAMHGDKSQQERDETLSEFKLGRSPILIATDVAARGLDVKDVMLVVNFDMPTNIEDYIHRIGRTGRAGSKGISVSFFTEKSNKMAGELVNILTEAKQVI 198          
BLAST of mRNA_Ecto-sp8_S_contig9691.31400.1 vs. uniprot
Match: A0A7S2BHU1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHU1_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.290e-64
Identity = 100/167 (59.88%), Postives = 132/167 (79.04%), Query Frame = 0
Query:    1 KVTVGSLELSANKDIQQVIEIVEDFGKYRVLAKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALAIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNSKCSRELIRILKQANQKV 167
            +VTVGSLEL+ANK I Q++E+V+D  KYR     ++EH    RV++FVETK+G D LTRS+R EG+PA AIHGDK Q ERDR L DF++GR +IL+ATDVAARGLDVK+++MV+NFD P   E YVHRIGRCGRAG  GT++S+F  KN++  R+L+++L+ A Q+V
Sbjct:  296 QVTVGSLELAANKSITQMVEVVDDNDKYRRCIGFMREHFKGERVIVFVETKRGADQLTRSIRQEGYPANAIHGDKTQDERDRTLQDFRDGRIMILIATDVAARGLDVKNVQMVVNFDMPNNAEDYVHRIGRCGRAGATGTSMSYFTRKNARMGRDLVKLLRDAGQEV 462          
BLAST of mRNA_Ecto-sp8_S_contig9691.31400.1 vs. uniprot
Match: UPI000C1D3E60 (DEAD-box ATP-dependent RNA helicase 20 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D3E60)

HSP 1 Score: 219 bits (559), Expect = 1.680e-64
Identity = 107/167 (64.07%), Postives = 132/167 (79.04%), Query Frame = 0
Query:    1 KVTVGSLELSANKDIQQVIEIVEDFGKYRVLAKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALAIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNSKCSRELIRILKQANQKV 167
            KV +GS +L AN  IQQV+EI+ D  KY  L + L++  +  ++LIFVETKKGCD +TR LR +GWPAL+IHGDK+Q ERDRVL +FK GRS I++ATDVAARGLDVKDI+ VINFDFP  +E YVHRIGR GRAG KGTA++FF   N+K +RELI+IL+QA Q V
Sbjct:  435 KVIIGSSDLKANLSIQQVVEIMTDLEKYNRLIRLLKDVMDGSKILIFVETKKGCDQVTRQLRMDGWPALSIHGDKSQDERDRVLAEFKSGRSPIMIATDVAARGLDVKDIKCVINFDFPSSLEDYVHRIGRTGRAGAKGTAVTFFTHGNAKYARELIKILQQAGQAV 601          
BLAST of mRNA_Ecto-sp8_S_contig9691.31400.1 vs. uniprot
Match: A0A6S7MVI8_LACSI (Uncharacterized protein n=1 Tax=Lactuca saligna TaxID=75948 RepID=A0A6S7MVI8_LACSI)

HSP 1 Score: 213 bits (543), Expect = 4.420e-64
Identity = 106/167 (63.47%), Postives = 129/167 (77.25%), Query Frame = 0
Query:    1 KVTVGSLELSANKDIQQVIEIVEDFGKYRVLAKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALAIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNSKCSRELIRILKQANQKV 167
            KV +GS  L AN+ I QVIE+V D  KY  L   L+E  +  R+LIFVETKKGCD +TR LR +GWPAL+IHGDK+QSERD VL +FK GRSLI+ ATDVAARGLDVKDI+ VIN+DFP  +E YVHRIGR GRAG KG A++FF   N+K +REL++IL++A Q V
Sbjct:  223 KVIIGSPVLKANQAINQVIEVVTDMEKYSRLIGVLKEMMDGSRILIFVETKKGCDQVTRQLRMDGWPALSIHGDKSQSERDWVLAEFKSGRSLIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGIAVTFFTHSNAKHARELVKILQEAGQAV 389          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9691.31400.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBB2_9PHAE1.370e-10997.01Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FGZ5_ECTSI1.900e-7470.06DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835ZEN1_9STRA2.340e-7064.07DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S2XX29_9STRA4.460e-6968.86Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6S9IVW3_9STRA1.270e-6564.50Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6S9KNI1_HETAK4.540e-6564.07Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A6T5VY21_9STRA9.530e-6559.88Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S2BHU1_9STRA1.290e-6459.88Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
UPI000C1D3E601.680e-6464.07DEAD-box ATP-dependent RNA helicase 20 n=1 Tax=Ole... [more]
A0A6S7MVI8_LACSI4.420e-6463.47Uncharacterized protein n=1 Tax=Lactuca saligna Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 55..136
e-value: 1.0E-34
score: 131.3
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 27..136
e-value: 8.0E-32
score: 109.9
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 14..176
score: 23.635
NoneNo IPR availableGENE3D3.40.50.300coord: 4..172
e-value: 5.7E-58
score: 197.1
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 3..177
NoneNo IPR availablePANTHERPTHR24031:SF683coord: 3..177
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 12..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9691contigEcto-sp8_S_contig9691:4052..7001 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9691.31400.1mRNA_Ecto-sp8_S_contig9691.31400.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9691 4052..7001 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9691.31400.1 ID=prot_Ecto-sp8_S_contig9691.31400.1|Name=mRNA_Ecto-sp8_S_contig9691.31400.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=209bp
KVTVGSLELSANKDIQQVIEIVEDFGKYRVLAKHLQEHNNAGRVLIFVET
KKGCDALTRSLRHEGWPALAIHGDKNQSERDRVLHDFKEGRSLILVATDV
AARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNS
KCSRELIRILKQANQKVGVRSPTCLSCTDDNHKDQHALTEVFDLNKPSQS
CAFRWLRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase