prot_Ecto-sp8_S_contig9690.31397.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9690.31397.1
Unique Nameprot_Ecto-sp8_S_contig9690.31397.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length362
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9690.31397.1 vs. uniprot
Match: A0A6H5KRK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRK2_9PHAE)

HSP 1 Score: 522 bits (1344), Expect = 8.950e-182
Identity = 308/362 (85.08%), Postives = 311/362 (85.91%), Query Frame = 0 
Query:    1 MLMNTGQGLAIEKNLAKFDVKVLAAETRKQAWIKDLGIGPKTSFVVYIIRVSRIRDGASCVSAQRYSELRSLYNHLKHEGQVRSEGAPEFPGKRVVTEESFLGDRSDANSEFVRHRKEQLGSFLRQLFNKNPELWEHPDVVEFFNLEALNQGKSYAERAHAAGGVGNGVGHGLRNYDPSVASEWNPYSIAMQAAQENRTRNTDFVAHSNDNDYRGXXXXXXXXXXXXXXXXXXIGAWFRGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPKAVPGSPVEIQVQALQDMGFAEDAARLALRASGYDTNLAAEYCVTGIPPDRAASVAALSPAA 362
            MLMNTGQGLAIEKNLAKFDVKVLAAETRKQAWIKDLGIGPKTSFVVYIIRVSRIRDGASCVSAQRYSELRSLYNHLKHEGQVRSEGAPEFPGKRVVTEESFLGDRSDANSEFVRHRKEQLGSFLRQLFNKNPELWEHPDVVEFFNLEAL+QGKSYAERAHAAGGVGNGVGHGLRNYDPSVASEWNPYSIAMQAAQENRTRNT +VAHSNDN+YRG XXXXXXXXX        IGAWFRGI XXXXXX                                     XXXXXXXXXXXX  PKAVPGSPVEIQVQAL DMGFAEDAARLALRASGYDTNLAAEYCVTGIPPDRAASVAALSPAA
Sbjct:   41 MLMNTGQGLAIEKNLAKFDVKVLAAETRKQAWIKDLGIGPKTSFVVYIIRVSRIRDGASCVSAQRYSELRSLYNHLKHEGQVRSEGAPEFPGKRVVTEESFLGDRSDANSEFVRHRKEQLGSFLRQLFNKNPELWEHPDVVEFFNLEALDQGKSYAERAHAAGGVGNGVGHGLRNYDPSVASEWNPYSIAMQAAQENRTRNTGYVAHSNDNNYRGGXXXXXXXXXGEDTGGG-IGAWFRGI-XXXXXXQPDQEGRFGPHQSNGYNNNGYNHGGGASAAQGRGRGWXXXXXXXXXXXXVPPKAVPGSPVEIQVQALLDMGFAEDAARLALRASGYDTNLAAEYCVTGIPPDRAASVAALSPAA 400
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BLAST of mRNA_Ecto-sp8_S_contig9690.31397.1 vs. uniprot
Match: D7FWZ4_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWZ4_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 2.020e-117
Identity = 171/173 (98.84%), Postives = 172/173 (99.42%), Query Frame = 0 
Query:    1 MLMNTGQGLAIEKNLAKFDVKVLAAETRKQAWIKDLGIGPKTSFVVYIIRVSRIRDGASCVSAQRYSELRSLYNHLKHEGQVRSEGAPEFPGKRVVTEESFLGDRSDANSEFVRHRKEQLGSFLRQLFNKNPELWEHPDVVEFFNLEALNQGKSYAERAHAAGGVGNGVGHGL 173
            MLMNTGQGLAIEKNLAKFDVKVLAAETRKQAWIKDLGIGPKTSFVVYIIRVSRIRDGASCVSAQRYSELRSLYNHLKHEGQVRSEGAPEFPGKRVVTEESFLGDRSDANSEFVRHRKEQLGSFLRQLFNKNPELWEHPDVVEFFNLEAL+QGKSYAERAHA GGVGNGVGHGL
Sbjct:   41 MLMNTGQGLAIEKNLAKFDVKVLAAETRKQAWIKDLGIGPKTSFVVYIIRVSRIRDGASCVSAQRYSELRSLYNHLKHEGQVRSEGAPEFPGKRVVTEESFLGDRSDANSEFVRHRKEQLGSFLRQLFNKNPELWEHPDVVEFFNLEALDQGKSYAERAHAGGGVGNGVGHGL 213
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BLAST of mRNA_Ecto-sp8_S_contig9690.31397.1 vs. uniprot
Match: D7FWZ3_ECTSI (UBA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWZ3_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 7.170e-34
Identity = 129/183 (70.49%), Postives = 130/183 (71.04%), Query Frame = 0 
Query:  191 MQAAQENRTRNTDFVAHSNDNDYRGXXXXXXXXXXXXXXXXXX-----------IGAWFRGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPKAVPGSPVEIQVQALQDMGFAEDAARLALRASGYDTNLAAEYCVTGIPPDRAASVAALSPAA 362
            MQAAQENRTRNTD+VAHSND     XXXXXXXXXXXXXXXXXX           IGAWFRGIGXXXXXX                                XXXXXXXXXXXX     AVPKAVPGSPVEIQVQALQDMGFAEDAARLALRASGYDTNLAAEYCVTGIPPDRAASVAALSPAA
Sbjct:    1 MQAAQENRTRNTDYVAHSNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDTGGXIGAWFRGIGXXXXXXQEHEGRFGPQQSNGYNNYGGGASAAQGRGRGWXXXXXXXXXXXX-----AVPKAVPGSPVEIQVQALQDMGFAEDAARLALRASGYDTNLAAEYCVTGIPPDRAASVAALSPAA 178
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9690.31397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KRK2_9PHAE8.950e-18285.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWZ4_ECTSI2.020e-11798.84PX domain-containing protein n=1 Tax=Ectocarpus si... [more]
D7FWZ3_ECTSI7.170e-3470.49UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 308..345
e-value: 0.0016
score: 27.7
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 311..342
e-value: 1.0E-7
score: 31.7
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 306..346
score: 10.716
IPR001683Phox homologous domainPFAMPF00787PXcoord: 45..145
e-value: 2.5E-8
score: 33.9
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 25..151
score: 11.997
NoneNo IPR availableGENE3D1.10.8.10coord: 290..350
e-value: 9.1E-11
score: 43.6
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 10..152
e-value: 6.1E-17
score: 63.7
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 42..148
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 301..349

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9690contigEcto-sp8_S_contig9690:1386..7138 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9690.31397.1mRNA_Ecto-sp8_S_contig9690.31397.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9690 1377..7138 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9690.31397.1 ID=prot_Ecto-sp8_S_contig9690.31397.1|Name=mRNA_Ecto-sp8_S_contig9690.31397.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=362bp
MLMNTGQGLAIEKNLAKFDVKVLAAETRKQAWIKDLGIGPKTSFVVYIIR
VSRIRDGASCVSAQRYSELRSLYNHLKHEGQVRSEGAPEFPGKRVVTEES
FLGDRSDANSEFVRHRKEQLGSFLRQLFNKNPELWEHPDVVEFFNLEALN
QGKSYAERAHAAGGVGNGVGHGLRNYDPSVASEWNPYSIAMQAAQENRTR
NTDFVAHSNDNDYRGGGGGGGGGGGGGEDTGGGIGAWFRGIGGGGGEQQE
QEGRFGPQQSNGYNNNGYNNYGGGASAAQGRGRGWWPGGGGNAAAAAAVP
KAVPGSPVEIQVQALQDMGFAEDAARLALRASGYDTNLAAEYCVTGIPPD
RAASVAALSPAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015940UBA
IPR001683Phox
IPR036871PX_dom_sf
IPR009060UBA-like_sf