prot_Ecto-sp8_S_contig96685.31370.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig96685.31370.1
Unique Nameprot_Ecto-sp8_S_contig96685.31370.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length105
Homology
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BLAST of mRNA_Ecto-sp8_S_contig96685.31370.1 vs. uniprot
Match: A0A0U2KDZ8_CALSV (60S ribosomal protein L10 n=1 Tax=Calanus sinicus TaxID=114070 RepID=A0A0U2KDZ8_CALSV)

HSP 1 Score: 216 bits (549), Expect = 1.580e-69
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0 
Query:    1 MGRRPAKCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKRAGVDEFPLSVHLVSDELEQLSSEALEAARICCNKYMVKYCGKDQFHIRIRVHPFMVLRINKMLSC 105
            MGRR AKCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKRAGVDEFPLSVHLVSDELEQLSSEALEAARICCNKY+VK CGKDQFHIRIRVHPFMVLRINKMLSC
Sbjct:    1 MGRRSAKCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKRAGVDEFPLSVHLVSDELEQLSSEALEAARICCNKYLVKNCGKDQFHIRIRVHPFMVLRINKMLSC 105
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BLAST of mRNA_Ecto-sp8_S_contig96685.31370.1 vs. uniprot
Match: A0A0U2V893_ACAPC (60S ribosomal protein L10 n=6 Tax=Calanoida TaxID=6833 RepID=A0A0U2V893_ACAPC)

HSP 1 Score: 213 bits (541), Expect = 2.600e-68
Identity = 98/105 (93.33%), Postives = 103/105 (98.10%), Query Frame = 0 
Query:    1 MGRRPAKCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKRAGVDEFPLSVHLVSDELEQLSSEALEAARICCNKYMVKYCGKDQFHIRIRVHPFMVLRINKMLSC 105
            MGRRPA+CYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRK+AGVDEFPLSVHLVSDELEQLSSEA+EAARICCNKY+VK CGKDQFHIR+RVHPF VLRINKMLSC
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKKAGVDEFPLSVHLVSDELEQLSSEAMEAARICCNKYLVKNCGKDQFHIRVRVHPFHVLRINKMLSC 105
[Close]
BLAST of mRNA_Ecto-sp8_S_contig96685.31370.1 vs. uniprot
Match: A0A0U2UPK3_9MAXI (60S ribosomal protein L10 n=1 Tax=Pseudodiaptomus poplesia TaxID=213370 RepID=A0A0U2UPK3_9MAXI)

HSP 1 Score: 204 bits (519), Expect = 5.750e-65
Identity = 95/105 (90.48%), Postives = 100/105 (95.24%), Query Frame = 0 
Query:    1 MGRRPAKCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKRAGVDEFPLSVHLVSDELEQLSSEALEAARICCNKYMVKYCGKDQFHIRIRVHPFMVLRINKMLSC 105
            MGRRPA+CYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKRA VD+FPLSVHLVSDELEQLSSEA+EAARICCNKY+VK  GKD FHIR+RVHPF VLRINKMLSC
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKRAPVDDFPLSVHLVSDELEQLSSEAMEAARICCNKYLVKTAGKDSFHIRVRVHPFHVLRINKMLSC 105
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BLAST of mRNA_Ecto-sp8_S_contig96685.31370.1 vs. uniprot
Match: A0A3M7QEC0_BRAPC (60S ribosomal L10 (Fragment) n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7QEC0_BRAPC)

HSP 1 Score: 199 bits (505), Expect = 1.420e-63
Identity = 93/105 (88.57%), Postives = 98/105 (93.33%), Query Frame = 0 
Query:    1 MGRRPAKCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKRAGVDEFPLSVHLVSDELEQLSSEALEAARICCNKYMVKYCGKDQFHIRIRVHPFMVLRINKMLSC 105
            MGRRPA+CYRYCKNKPYPKSR  RGVPDPKIRIFDLGRKRA V+EFPL VHLVSDELEQLSSEALEA RICCNKY+VKYCGKD FHIR+R+HPF VLRINKMLSC
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRHCRGVPDPKIRIFDLGRKRARVEEFPLCVHLVSDELEQLSSEALEAGRICCNKYLVKYCGKDFFHIRMRLHPFHVLRINKMLSC 105
[Close]
BLAST of mRNA_Ecto-sp8_S_contig96685.31370.1 vs. uniprot
Match: A0A336M8R2_CULSO (CSON013611 protein n=1 Tax=Culicoides sonorensis TaxID=179676 RepID=A0A336M8R2_CULSO)

HSP 1 Score: 199 bits (507), Expect = 3.830e-63
Identity = 91/105 (86.67%), Postives = 99/105 (94.29%), Query Frame = 0 
Query:    1 MGRRPAKCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKRAGVDEFPLSVHLVSDELEQLSSEALEAARICCNKYMVKYCGKDQFHIRIRVHPFMVLRINKMLSC 105
            MGRRPA+CYRYCKNKPYPKSRF RGVPD KIRIFDLGRK+AGVD+FPL VHLVSDE EQLSSEALEA RICCNKY+VK+CGKDQFHIR+R+HPF V+RINKMLSC
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAGVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKFCGKDQFHIRMRLHPFHVIRINKMLSC 105
[Close]
BLAST of mRNA_Ecto-sp8_S_contig96685.31370.1 vs. uniprot
Match: A0A5S6QGJ5_TRIMR (Ribosomal_L16 domain-containing protein n=3 Tax=Trichuris TaxID=36086 RepID=A0A5S6QGJ5_TRIMR)

HSP 1 Score: 198 bits (503), Expect = 1.370e-62
Identity = 91/105 (86.67%), Postives = 97/105 (92.38%), Query Frame = 0 
Query:    1 MGRRPAKCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKRAGVDEFPLSVHLVSDELEQLSSEALEAARICCNKYMVKYCGKDQFHIRIRVHPFMVLRINKMLSC 105
            MGRRPA+CYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRK+A VDEFPL VHLVSDE EQ+SSEALEAARIC NKY+ K CGKD FH+RIRVHPF V+RINKMLSC
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKKATVDEFPLCVHLVSDEFEQISSEALEAARICANKYLTKSCGKDTFHVRIRVHPFHVIRINKMLSC 105
[Close]
BLAST of mRNA_Ecto-sp8_S_contig96685.31370.1 vs. uniprot
Match: A0A8E6YJR5_9EUKA (60S ribosomal protein L10 n=1 Tax=Salpingoeca prava TaxID=2320254 RepID=A0A8E6YJR5_9EUKA)

HSP 1 Score: 197 bits (501), Expect = 2.940e-62
Identity = 90/105 (85.71%), Postives = 98/105 (93.33%), Query Frame = 0 
Query:    1 MGRRPAKCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKRAGVDEFPLSVHLVSDELEQLSSEALEAARICCNKYMVKYCGKDQFHIRIRVHPFMVLRINKMLSC 105
            MGRRPA+CYRYCKNKPYPKSRFNRGVPDPKIRI+DLGRKRA VD+FPL+VHL+SDE EQ+SSEALEAARICCNKY+VK  GKD FHIR+RVHPF V RINKMLSC
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFNRGVPDPKIRIYDLGRKRASVDDFPLAVHLISDEYEQISSEALEAARICCNKYLVKNVGKDGFHIRVRVHPFHVTRINKMLSC 105
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BLAST of mRNA_Ecto-sp8_S_contig96685.31370.1 vs. uniprot
Match: B2YI31_9BILA (Putative 60S ribosomal protein RPL10 (Fragment) n=1 Tax=Phoronis muelleri TaxID=478209 RepID=B2YI31_9BILA)

HSP 1 Score: 197 bits (500), Expect = 3.240e-62
Identity = 92/105 (87.62%), Postives = 97/105 (92.38%), Query Frame = 0 
Query:    1 MGRRPAKCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKRAGVDEFPLSVHLVSDELEQLSSEALEAARICCNKYMVKYCGKDQFHIRIRVHPFMVLRINKMLSC 105
            MGRRPA+CYRYCKNKPYPKSRF RGVPD KIRI+DLGRK+A VDEFPL +HLVSDELEQLSSEALEA RIC NKYMVK+CGKD FHIRIRVHPF VLRINKMLSC
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIYDLGRKKARVDEFPLCIHLVSDELEQLSSEALEAGRICANKYMVKFCGKDSFHIRIRVHPFHVLRINKMLSC 105
[Close]
BLAST of mRNA_Ecto-sp8_S_contig96685.31370.1 vs. uniprot
Match: G1XH44_ARTOA (Ribosomal_L16 domain-containing protein n=6 Tax=Orbiliaceae TaxID=47021 RepID=G1XH44_ARTOA)

HSP 1 Score: 195 bits (496), Expect = 1.800e-61
Identity = 90/105 (85.71%), Postives = 97/105 (92.38%), Query Frame = 0 
Query:    1 MGRRPAKCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKRAGVDEFPLSVHLVSDELEQLSSEALEAARICCNKYMVKYCGKDQFHIRIRVHPFMVLRINKMLSC 105
            MGRRPA+CYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKRAGVDEFPL +HLVS+E EQLSSEALEAARIC NKY+VK  GKD FH+R+R HPF V+RINKMLSC
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKRAGVDEFPLCIHLVSNEYEQLSSEALEAARICANKYLVKIAGKDGFHMRVRCHPFHVIRINKMLSC 105
[Close]
BLAST of mRNA_Ecto-sp8_S_contig96685.31370.1 vs. uniprot
Match: UPI00083C7D27 (60S ribosomal protein L10 n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C7D27)

HSP 1 Score: 195 bits (496), Expect = 1.800e-61
Identity = 90/105 (85.71%), Postives = 97/105 (92.38%), Query Frame = 0 
Query:    1 MGRRPAKCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKRAGVDEFPLSVHLVSDELEQLSSEALEAARICCNKYMVKYCGKDQFHIRIRVHPFMVLRINKMLSC 105
            MGRRPA+CYRYCKNKPYPKSRF RGVPD KIRIFDLGRK+A VD+FPL VHLVSDE EQLSSEALEA RICCNKY+VK CGKDQFHIR+R+HPF V+RINKMLSC
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAAVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSC 105
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig96685.31370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0U2KDZ8_CALSV1.580e-6997.1460S ribosomal protein L10 n=1 Tax=Calanus sinicus ... [more]
A0A0U2V893_ACAPC2.600e-6893.3360S ribosomal protein L10 n=6 Tax=Calanoida TaxID=... [more]
A0A0U2UPK3_9MAXI5.750e-6590.4860S ribosomal protein L10 n=1 Tax=Pseudodiaptomus ... [more]
A0A3M7QEC0_BRAPC1.420e-6388.5760S ribosomal L10 (Fragment) n=1 Tax=Brachionus pl... [more]
A0A336M8R2_CULSO3.830e-6386.67CSON013611 protein n=1 Tax=Culicoides sonorensis T... [more]
A0A5S6QGJ5_TRIMR1.370e-6286.67Ribosomal_L16 domain-containing protein n=3 Tax=Tr... [more]
A0A8E6YJR5_9EUKA2.940e-6285.7160S ribosomal protein L10 n=1 Tax=Salpingoeca prav... [more]
B2YI31_9BILA3.240e-6287.62Putative 60S ribosomal protein RPL10 (Fragment) n=... [more]
G1XH44_ARTOA1.800e-6185.71Ribosomal_L16 domain-containing protein n=6 Tax=Or... [more]
UPI00083C7D271.800e-6185.7160S ribosomal protein L10 n=1 Tax=Nicrophorus vesp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016180Ribosomal protein L10e/L16PFAMPF00252Ribosomal_L16coord: 12..100
e-value: 4.8E-22
score: 78.4
IPR036920Ribosomal protein L10e/L16 superfamilyGENE3D3.90.1170.10coord: 1..105
e-value: 1.0E-56
score: 194.0
IPR036920Ribosomal protein L10e/L16 superfamilySUPERFAMILY54686Ribosomal protein L16p/L10ecoord: 4..105
IPR001197Ribosomal protein L10ePANTHERPTHR1172660S RIBOSOMAL PROTEIN L10coord: 1..105
NoneNo IPR availablePANTHERPTHR11726:SF28coord: 1..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig96685contigEcto-sp8_S_contig96685:38..352 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig96685.31370.1mRNA_Ecto-sp8_S_contig96685.31370.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig96685 35..352 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig96685.31370.1 ID=prot_Ecto-sp8_S_contig96685.31370.1|Name=mRNA_Ecto-sp8_S_contig96685.31370.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=105bp
MGRRPAKCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKRAGVDEFPLSV
HLVSDELEQLSSEALEAARICCNKYMVKYCGKDQFHIRIRVHPFMVLRIN
KMLSC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016180Ribosomal_L10e/L16
IPR036920Ribosomal_L10e/L16_sf
IPR001197Ribosomal_L10e