prot_Ecto-sp8_S_contig96683.31369.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig96683.31369.1
Unique Nameprot_Ecto-sp8_S_contig96683.31369.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length80
Homology
BLAST of mRNA_Ecto-sp8_S_contig96683.31369.1 vs. uniprot
Match: D7FSX6_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX6_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 1.390e-42
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0
Query:    1 MPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVTRH 80
            MPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQV  H
Sbjct:  474 MPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIH 553          
BLAST of mRNA_Ecto-sp8_S_contig96683.31369.1 vs. uniprot
Match: A0A6H5JG61_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG61_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 2.350e-42
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0
Query:    1 MPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVTRH 80
            MPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQV  H
Sbjct:  862 MPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIH 941          
BLAST of mRNA_Ecto-sp8_S_contig96683.31369.1 vs. uniprot
Match: A0A067BXZ3_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BXZ3_SAPPC)

HSP 1 Score: 84.0 bits (206), Expect = 4.130e-17
Identity = 43/78 (55.13%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    4 AAVNLHGTRCVQKVVELCRTD-AQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVTRH 80
            AA+NLHGTR VQKVVE+C TD A A++I  +L    V+L +D NGNHV+QRALQ +PA  N FV +A+ A    V  H
Sbjct:  353 AALNLHGTRSVQKVVEVCATDRALASLIVSALEDDAVRLCIDSNGNHVIQRALQFLPAEFNQFVFDAVAADCTVVGTH 430          
BLAST of mRNA_Ecto-sp8_S_contig96683.31369.1 vs. uniprot
Match: A0A4D9CTA7_9STRA (PUM-HD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTA7_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.470e-16
Identity = 37/76 (48.68%), Postives = 55/76 (72.37%), Query Frame = 0
Query:    5 AVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVTRH 80
            A+NLHGTR VQ+++E+C+T  Q A I  +L   VV+L +D NGNHVVQRALQH+ +    F+ EA++ + ++V+ H
Sbjct:  893 ALNLHGTRSVQRILEVCKTKDQVATITAALRHDVVRLCVDANGNHVVQRALQHLGSEDRAFIFEAVSQACLEVSTH 968          
BLAST of mRNA_Ecto-sp8_S_contig96683.31369.1 vs. uniprot
Match: A0A1V9YPP5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPP5_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.960e-16
Identity = 41/78 (52.56%), Postives = 52/78 (66.67%), Query Frame = 0
Query:    4 AAVNLHGTRCVQKVVELCRTDAQ-AAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVTRH 80
            AA+NLHGTR VQKVVE+C TD   A +I ++L    V+L +D NGNHV+QRALQ +PA  N FV +A+      V  H
Sbjct:  338 AALNLHGTRSVQKVVEVCATDRTLATIIVKALRGDAVRLCIDSNGNHVIQRALQFLPADFNQFVFDAVATDCTVVGTH 415          
BLAST of mRNA_Ecto-sp8_S_contig96683.31369.1 vs. uniprot
Match: A0A485KML4_9STRA (Aste57867_9189 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KML4_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 3.680e-16
Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 0
Query:    4 AAVNLHGTRCVQKVVELCRTDAQAAV---IARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVTRH 80
            AA+NLHGTR VQKVVE+C + +Q A+   I  +L    V+L +D NGNHV+QRALQ+MP+  N FV +A+ A    V  H
Sbjct:  420 AALNLHGTRSVQKVVEICASSSQPALVQLIVDALKEDAVRLCIDSNGNHVIQRALQYMPSEYNQFVFDAVCAECTVVGTH 499          
BLAST of mRNA_Ecto-sp8_S_contig96683.31369.1 vs. uniprot
Match: A0A3R7AAA0_9STRA (PUM-HD domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7AAA0_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.000e-15
Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    4 AAVNLHGTRCVQKVVELCRTDAQ---AAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVTRH 80
            AA+NLHGTR VQKVVE+C + +      +I  +L    V+L +D NGNHV+QRALQ+MPA  N FV +A++A    V  H
Sbjct:  118 AALNLHGTRSVQKVVEICSSSSMPQLVELIVDALKDDAVRLCIDSNGNHVIQRALQYMPATYNQFVFDAVSAECTVVGTH 197          
BLAST of mRNA_Ecto-sp8_S_contig96683.31369.1 vs. uniprot
Match: A0A024TSS5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TSS5_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.280e-15
Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    4 AAVNLHGTRCVQKVVELCRTDAQ---AAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVTRH 80
            AA+NLHGTR VQKVVE+C + +      +I  +L    V+L +D NGNHV+QRALQ+MPA  N FV +A++A    V  H
Sbjct:  447 AALNLHGTRSVQKVVEICSSSSMPQLVELIVDALKDDAVRLCIDSNGNHVIQRALQYMPATYNQFVFDAVSAECTVVGTH 526          
BLAST of mRNA_Ecto-sp8_S_contig96683.31369.1 vs. uniprot
Match: D8LGB5_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB5_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 1.720e-15
Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 0
Query:    1 MPEAAVNLHGTRCVQKVVELCR-TDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLE 68
            M EA +NLHGTR VQK++E+CR T +Q AV+  +L  + V L LD NGNHVVQR LQH+    N FV E
Sbjct:  143 MVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFVFE 211          
BLAST of mRNA_Ecto-sp8_S_contig96683.31369.1 vs. uniprot
Match: A0A7S3PN02_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PN02_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 4.400e-15
Identity = 41/86 (47.67%), Postives = 53/86 (61.63%), Query Frame = 0
Query:    3 EAAVNLHGTRCVQKVVELC-------RTDA-QAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVTRH 80
            +AA+NLHGTR VQK +E+C       R D  Q  ++   L P V KLS+D NGNHV+QR LQHMP     FV +A    ++ +TRH
Sbjct:  285 QAALNLHGTRSVQKFIEVCGGSSGRRRPDLEQLNLLVECLSPFVTKLSMDTNGNHVIQRCLQHMPVEIVQFVYDAAVKDVLVITRH 370          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig96683.31369.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSX6_ECTSI1.390e-4297.50PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JG61_9PHAE2.350e-4297.50PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A067BXZ3_SAPPC4.130e-1755.13Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
A0A4D9CTA7_9STRA1.470e-1648.68PUM-HD domain-containing protein n=2 Tax=Monodopsi... [more]
A0A1V9YPP5_9STRA1.960e-1652.56Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A485KML4_9STRA3.680e-1651.25Aste57867_9189 protein n=1 Tax=Aphanomyces stellat... [more]
A0A3R7AAA0_9STRA1.000e-1550.00PUM-HD domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A024TSS5_9STRA1.280e-1550.00Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
D8LGB5_ECTSI1.720e-1556.52PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S3PN02_9STRA4.400e-1547.67Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001313Pumilio RNA-binding repeatSMARTSM00025pum_5coord: 33..68
e-value: 6.2E-5
score: 32.4
IPR001313Pumilio RNA-binding repeatPFAMPF00806PUFcoord: 34..61
e-value: 3.2E-7
score: 29.7
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 1..31
score: 6.937
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 33..68
score: 9.807
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..80
e-value: 1.0E-21
score: 79.0
NoneNo IPR availablePANTHERPTHR12537RNA BINDING PROTEIN PUMILIO-RELATEDcoord: 4..80
NoneNo IPR availablePANTHERPTHR12537:SF13PUMILIO HOMOLOGY DOMAIN FAMILY MEMBER 4coord: 4..80
IPR033133Pumilio homology domainPROSITEPS50303PUM_HDcoord: 1..80
score: 18.836
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 5..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig96683contigEcto-sp8_S_contig96683:16..507 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig96683.31369.1mRNA_Ecto-sp8_S_contig96683.31369.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig96683 16..507 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig96683.31369.1 ID=prot_Ecto-sp8_S_contig96683.31369.1|Name=mRNA_Ecto-sp8_S_contig96683.31369.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=80bp
MPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHV
VQRALQHMPAPRNDFVLEAITASLVQVTRH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001313Pumilio_RNA-bd_rpt
IPR011989ARM-like
IPR033133PUM-HD
IPR016024ARM-type_fold