prot_Ecto-sp8_S_contig9646.31331.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9646.31331.1
Unique Nameprot_Ecto-sp8_S_contig9646.31331.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length343
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9646.31331.1 vs. uniprot
Match: A0A6H5K928_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K928_9PHAE)

HSP 1 Score: 388 bits (996), Expect = 6.570e-119
Identity = 240/343 (69.97%), Postives = 242/343 (70.55%), Query Frame = 0 
Query:    1 LQCCSAHGQAHLEDLGLRAAHGRALGAEAKLLAREEAREAQDAAAASGFDATNLPESAGPAAGSFVTAATGAEAEAAGGLGLENLRPHLSELRAAAFQLELCLALHARGCLRLSSRARAEAAMGFRAGLLVETLXXRYDVTAALVGCPPASPEADEPRLSDSQGSEALSPGGSGXXXXXXXXSDRDERRRAWVGTPNAELLDALSRLPRRDFETLGLEPWESSLKGRQTSPRKNANGNPSGGSRTCDAPTEERNPAASXXXXXXXXXXDLRLSEDSDDEGESPIEEEREHLVRLTDSLSRGVWPTYARLACALNLLALRATHAQLCRSLAGLIWGDGYRARAP 343
            LQCC+AHGQAHLEDLGLRAAHGRALGAEAKLLAREEAREAQDAAA SG DATNLPESA PAAGSFVTAA  AEAEAAGGLGLENLRPHLSELRAAAFQLELCLALH RGCLRLSSRARAEAAMGFRAGLLVETL  RYDVT ALVGCPPASPEADEP L DS  SEALSPGG+GXXXXXXXX                                                                                      D RLSEDSDDEGE PIEEEREHLVRLTDSLSRGVWPTYARLACALNLLALRATHAQLCRSLAGLIWGDGYRARAP
Sbjct: 2994 LQCCNAHGQAHLEDLGLRAAHGRALGAEAKLLAREEAREAQDAAA-SGLDATNLPESARPAAGSFVTAAPAAEAEAAGGLGLENLRPHLSELRAAAFQLELCLALHERGCLRLSSRARAEAAMGFRAGLLVETLGRRYDVTVALVGCPPASPEADEPSLFDSHESEALSPGGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------DPRLSEDSDDEGEFPIEEEREHLVRLTDSLSRGVWPTYARLACALNLLALRATHAQLCRSLAGLIWGDGYRARAP 3274
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BLAST of mRNA_Ecto-sp8_S_contig9646.31331.1 vs. uniprot
Match: D7G824_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G824_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 5.890e-103
Identity = 200/216 (92.59%), Postives = 201/216 (93.06%), Query Frame = 0 
Query:    1 LQCCSAHGQAHLEDLGLRAAHGRALGAEAKLLAREEAREAQDAAAAS-GFDATNLPESAGPAAGSFVTAATGAEAEAAGGLGLENLRPHLSELRAAAFQLELCLALHARGCLRLSSRARAEAAMGFRAGLLVETLXXRYDVTAALVGCPPASPEADEPRLSDSQGSEALSPGGSGXXXXXXXXSDRDERRRAWVGTPNAELLDALSRLPRRDFETL 215
            LQCCSAHGQAHLEDLGLRAAHGRALGAEAKLLAREEAREAQDAAAA+ GFDATNL ESAGPAAGSFVTAATGAEAEAAGGLGLENLRPHLSELRAAAFQLELCLALHARGCLRLSSRARAEAAMGFRAGLLVETL  RYDVTAALVGCPPASPEADEPRLSDSQ SEALSPGG  XXXXXXXXSDRDE RRAWVGTPNAELLDALSR   R    L
Sbjct: 2958 LQCCSAHGQAHLEDLGLRAAHGRALGAEAKLLAREEAREAQDAAAAAAGFDATNLSESAGPAAGSFVTAATGAEAEAAGGLGLENLRPHLSELRAAAFQLELCLALHARGCLRLSSRARAEAAMGFRAGLLVETLGRRYDVTAALVGCPPASPEADEPRLSDSQESEALSPGGXXXXXXXXXXSDRDEGRRAWVGTPNAELLDALSRPTARGSHRL 3173
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9646.31331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K928_9PHAE6.570e-11969.97PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G824_ECTSI5.890e-10392.59PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9646contigEcto-sp8_S_contig9646:1741..3780 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9646.31331.1mRNA_Ecto-sp8_S_contig9646.31331.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9646 1741..3780 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9646.31331.1 ID=prot_Ecto-sp8_S_contig9646.31331.1|Name=mRNA_Ecto-sp8_S_contig9646.31331.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=343bp
LQCCSAHGQAHLEDLGLRAAHGRALGAEAKLLAREEAREAQDAAAASGFD
ATNLPESAGPAAGSFVTAATGAEAEAAGGLGLENLRPHLSELRAAAFQLE
LCLALHARGCLRLSSRARAEAAMGFRAGLLVETLXXRYDVTAALVGCPPA
SPEADEPRLSDSQGSEALSPGGSGGGSGSGYGSDRDERRRAWVGTPNAEL
LDALSRLPRRDFETLGLEPWESSLKGRQTSPRKNANGNPSGGSRTCDAPT
EERNPAASTVVAGGGGGGDLRLSEDSDDEGESPIEEEREHLVRLTDSLSR
GVWPTYARLACALNLLALRATHAQLCRSLAGLIWGDGYRARAP
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