prot_Ecto-sp8_S_contig9641.31326.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9641.31326.1
Unique Nameprot_Ecto-sp8_S_contig9641.31326.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length265
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9641.31326.1 vs. uniprot
Match: D7FVY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVY1_ECTSI)

HSP 1 Score: 503 bits (1295), Expect = 1.600e-174
Identity = 252/264 (95.45%), Postives = 259/264 (98.11%), Query Frame = 0 
Query:    1 HSQFRHACSPEAECHNTDGGYDCLCAEGYAGDGLTTGQGCVDVTPPTITCRGPGCQTANFRACNSVGMMSEDGSKKTLTAALDDAAIENNVKLLKGDLCGHGDAAAPGAADDDDVEGEGDASDSRDWKPEVCFTATDVEYGGRVVDLTANITRGALEKIPGRERMWRVPHNVKDASGNSAKVFYYNIAVEEVDVLGSLQGSAEILQQEMSELFFMRIAVAALLVLLLFPLVWRVLMFVRVVLAAAKVVFFPYSMISSREDFKLG 264
            H++FRHACSPEAECHNTDGGY+CLCAEGYAGDGLTTGQGCVDVTPPTITCRGPGC TANFRACNSVGMMSEDGSKKTLTAALDDAAIE+ +KLLKGDLCGHGD AAPGAADDDD EGEGDASDSR+WKPEVCFTA+DVEYGGRVVDLTANITRGALEKIPGRERMWRVPHNVKDASGNSAKVFYYNIAVEEVDVL SLQGSAEILQQEMSELFFMRIAVAALLVLLLFPLVWRVLMFVRVVLAAAKVVFFPYSMISSREDFKLG
Sbjct:  339 HAEFRHACSPEAECHNTDGGYECLCAEGYAGDGLTTGQGCVDVTPPTITCRGPGCHTANFRACNSVGMMSEDGSKKTLTAALDDAAIESYIKLLKGDLCGHGDEAAPGAADDDDFEGEGDASDSREWKPEVCFTASDVEYGGRVVDLTANITRGALEKIPGRERMWRVPHNVKDASGNSAKVFYYNIAVEEVDVLESLQGSAEILQQEMSELFFMRIAVAALLVLLLFPLVWRVLMFVRVVLAAAKVVFFPYSMISSREDFKLG 602
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BLAST of mRNA_Ecto-sp8_S_contig9641.31326.1 vs. uniprot
Match: A0A6H5L5P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5P6_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 8.540e-104
Identity = 163/179 (91.06%), Postives = 167/179 (93.30%), Query Frame = 0 
Query:   86 AIENNVKLLKGDLCGHGDAAAPGAADDDDVEGEGDASDSRDWKPEVCFTATDVEYGGRVVDLTANITRGALEKIPGRERMWRVPHNVKDASGNSAKVFYYNIAVEEVDVLGSLQGSAEILQQEMSELFFMRIAVAALLVLLLFPLVWRVLMFVRVVLAAAKVVFFPYSMISSREDFKLG 264
            A+   ++ LKGDLCGHG AA PGAADDDD EGEGDASDSR+WKPEVCFTATDVEYGGRVVDLTANITRGALEKIPGRE MWRVPHNVKDASGNSAKVFYY IAVEEVDVL SLQGSAEIL QEMSELF MRIAVAALLVLLLFPLVWRVLMFVRVVLAAAKVVFFPYSMISSREDFKLG
Sbjct:    2 AMTMAIQQLKGDLCGHGYAAGPGAADDDDFEGEGDASDSREWKPEVCFTATDVEYGGRVVDLTANITRGALEKIPGREGMWRVPHNVKDASGNSAKVFYYKIAVEEVDVLESLQGSAEILHQEMSELFLMRIAVAALLVLLLFPLVWRVLMFVRVVLAAAKVVFFPYSMISSREDFKLG 180
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BLAST of mRNA_Ecto-sp8_S_contig9641.31326.1 vs. uniprot
Match: Q8WPL1_OIKDI (Fibrillin-like protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=Q8WPL1_OIKDI)

HSP 1 Score: 56.2 bits (134), Expect = 2.800e-5
Identity = 21/38 (55.26%), Postives = 28/38 (73.68%), Query Frame = 0 
Query:    6 HACSPEAECHNTDGGYDCLCAEGYAGDGLTTGQGCVDV 43
            H C  EA C+N +GGY+CLCA+G+ GDG+T G  C D+
Sbjct: 1609 HMCFNEATCNNFEGGYECLCADGFEGDGMTNGDNCTDI 1646
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9641.31326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVY1_ECTSI1.600e-17495.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5P6_9PHAE8.540e-10491.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
Q8WPL1_OIKDI2.800e-555.26Fibrillin-like protein n=1 Tax=Oikopleura dioica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.10.25.10coord: 2..38
e-value: 6.1E-9
score: 37.6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 256..264
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 232..236
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..212
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 213..231
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 237..255
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 5..35
NoneNo IPR availableTMHMMTMhelixcoord: 213..235
IPR024731EGF domainPFAMPF12947EGF_3coord: 6..35
e-value: 1.6E-8
score: 34.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9641contigEcto-sp8_S_contig9641:85..4069 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9641.31326.1mRNA_Ecto-sp8_S_contig9641.31326.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9641 85..4069 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9641.31326.1 ID=prot_Ecto-sp8_S_contig9641.31326.1|Name=mRNA_Ecto-sp8_S_contig9641.31326.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=265bp
HSQFRHACSPEAECHNTDGGYDCLCAEGYAGDGLTTGQGCVDVTPPTITC
RGPGCQTANFRACNSVGMMSEDGSKKTLTAALDDAAIENNVKLLKGDLCG
HGDAAAPGAADDDDVEGEGDASDSRDWKPEVCFTATDVEYGGRVVDLTAN
ITRGALEKIPGRERMWRVPHNVKDASGNSAKVFYYNIAVEEVDVLGSLQG
SAEILQQEMSELFFMRIAVAALLVLLLFPLVWRVLMFVRVVLAAAKVVFF
PYSMISSREDFKLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024731EGF_dom