prot_Ecto-sp8_S_contig9638.31322.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9638.31322.1
Unique Nameprot_Ecto-sp8_S_contig9638.31322.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length249
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9638.31322.1 vs. uniprot
Match: D7G976_ECTSI (Fibronectin type III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G976_ECTSI)

HSP 1 Score: 432 bits (1111), Expect = 7.960e-152
Identity = 225/249 (90.36%), Postives = 236/249 (94.78%), Query Frame = 0 
Query:    1 MSLLGALFLALASGAVIGRASGESVESSACEFSTFLSLRADWDADDEPCQKKLSFELWTFMKAEGSAQNPDAQRVRASCVEQEEIGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVASVLEAYPRNKQRGQTRRHLQSTTSEAGQAHQVAELINGLENLGCTRTTGEDQKLCVLSDSFNYLGDAATLKDLGDLPEVEVVKEIPEGDEGTDEGACGLSLWYDYA 249
            M LLGALFLAL SGAVIGRASGESVESSACEFSTFLSLRA+WDADDEPCQKKLSFELWTFM+AEGSAQ+PDAQRVRASCVE EEIG+VELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATA+TFEAFCEDENIERVTRVASVLEAYPRNK+ G+TRRHLQSTTSEAGQAHQVAELI+GL+NLGCTRTTGEDQKLCVLSDSFNY GDAATLKD GDLPEVEVVKEIPEG EG DEG+  + L YD A
Sbjct:    1 MPLLGALFLALTSGAVIGRASGESVESSACEFSTFLSLRAEWDADDEPCQKKLSFELWTFMQAEGSAQSPDAQRVRASCVEHEEIGVVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAMTFEAFCEDENIERVTRVASVLEAYPRNKRSGRTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNYFGDAATLKDSGDLPEVEVVKEIPEGYEGVDEGSAMIELAYDIA 249
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BLAST of mRNA_Ecto-sp8_S_contig9638.31322.1 vs. uniprot
Match: A0A6H5KTN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTN7_9PHAE)

HSP 1 Score: 341 bits (874), Expect = 9.840e-117
Identity = 173/189 (91.53%), Postives = 181/189 (95.77%), Query Frame = 0 
Query:   38 LRADWDADDEPCQKKLSFELWTFMKAEGSAQNPDAQRVRASCVEQEEIGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVASVLEAYPRNKQRGQTRRHLQSTTSEAGQAHQVAELINGLENLGCTRTTGEDQKLCVLSDSFNYLGDAATLKDLGDLPEVEVVK 226
            +RADWDADDEPCQKKLSFELWTFMKAEGSA NPDAQRVRASCVE EEIGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVA V+EAYP NK  GQTRRHLQS+TS+AGQAHQVAELI+GL+NLGCTRTTGED+KLCVLSDSFNYLG AATLKD GDLPEVEV+K
Sbjct:   15 IRADWDADDEPCQKKLSFELWTFMKAEGSAHNPDAQRVRASCVEHEEIGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVAPVVEAYPFNKHGGQTRRHLQSSTSQAGQAHQVAELIDGLKNLGCTRTTGEDKKLCVLSDSFNYLGKAATLKDSGDLPEVEVIK 203
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9638.31322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G976_ECTSI7.960e-15290.36Fibronectin type III domain-containing protein n=1... [more]
A0A6H5KTN7_9PHAE9.840e-11791.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..249
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.779

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9638contigEcto-sp8_S_contig9638:3625..6561 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9638.31322.1mRNA_Ecto-sp8_S_contig9638.31322.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9638 3625..6561 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9638.31322.1 ID=prot_Ecto-sp8_S_contig9638.31322.1|Name=mRNA_Ecto-sp8_S_contig9638.31322.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=249bp
MSLLGALFLALASGAVIGRASGESVESSACEFSTFLSLRADWDADDEPCQ
KKLSFELWTFMKAEGSAQNPDAQRVRASCVEQEEIGLVELITPKGYTMSD
SVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVASVLEAYP
RNKQRGQTRRHLQSTTSEAGQAHQVAELINGLENLGCTRTTGEDQKLCVL
SDSFNYLGDAATLKDLGDLPEVEVVKEIPEGDEGTDEGACGLSLWYDYA
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