prot_Ecto-sp8_S_contig9637.31318.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9637.31318.1
Unique Nameprot_Ecto-sp8_S_contig9637.31318.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length41
Homology
BLAST of mRNA_Ecto-sp8_S_contig9637.31318.1 vs. uniprot
Match: A0A6H5L2Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Y8_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 9.860e-21
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0
Query:    1 LLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGRPPVL 40
            LLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGRPPVL
Sbjct:   97 LLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGRPPVL 136          
BLAST of mRNA_Ecto-sp8_S_contig9637.31318.1 vs. uniprot
Match: D7FKC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKC7_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 8.780e-19
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0
Query:    1 LLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGRPPVL 40
            LLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGRPPVL
Sbjct: 1605 LLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGRPPVL 1644          
BLAST of mRNA_Ecto-sp8_S_contig9637.31318.1 vs. uniprot
Match: A0A7S1XKF3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKF3_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 4.460e-11
Identity = 27/37 (72.97%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    1 LLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGRP 37
            L R  GT+N+ EPYVYT PRADTVLH GDRVF+LG P
Sbjct:   53 LYRTAGTKNSVEPYVYTAPRADTVLHEGDRVFVLGEP 89          
BLAST of mRNA_Ecto-sp8_S_contig9637.31318.1 vs. uniprot
Match: H3HCD7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCD7_PHYRM)

HSP 1 Score: 48.5 bits (114), Expect = 2.380e-5
Identity = 21/35 (60.00%), Postives = 29/35 (82.86%), Query Frame = 0
Query:    1 LLRARGTRN-APEPYVYTGPRADTVLHPGDRVFIL 34
            LLRA+G R  AP PYVYT P +DT+++PGD++F+L
Sbjct: 2532 LLRAKGGRGGAPYPYVYTCPSSDTIVYPGDKIFVL 2566          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9637.31318.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L2Y8_9PHAE9.860e-21100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKC7_ECTSI8.780e-19100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1XKF3_9STRA4.460e-1172.97Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
H3HCD7_PHYRM2.380e-560.00Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9637contigEcto-sp8_S_contig9637:907..1029 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9637.31318.1mRNA_Ecto-sp8_S_contig9637.31318.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9637 907..1029 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9637.31318.1 ID=prot_Ecto-sp8_S_contig9637.31318.1|Name=mRNA_Ecto-sp8_S_contig9637.31318.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=41bp
LLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGRPPVL*
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