prot_Ecto-sp8_S_contig96266.31299.1 (polypeptide) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig96266.31299.1 vs. uniprot
Match: D7FUU1_ECTSI (Replication protein A subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU1_ECTSI) HSP 1 Score: 107 bits (268), Expect = 2.180e-26 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0
Query: 5 SRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVKV 55
SRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVK+
Sbjct: 127 SRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVKL 177
BLAST of mRNA_Ecto-sp8_S_contig96266.31299.1 vs. uniprot
Match: A0A6H5JTK0_9PHAE (Replication protein A subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK0_9PHAE) HSP 1 Score: 107 bits (268), Expect = 6.110e-26 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0
Query: 5 SRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVKV 55
SRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVK+
Sbjct: 376 SRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVKL 426
BLAST of mRNA_Ecto-sp8_S_contig96266.31299.1 vs. uniprot
Match: A0A6U0TYW6_9STRA (Replication protein A subunit n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TYW6_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 2.140e-12 Identity = 30/50 (60.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query: 6 RAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVKV 55
+ K+L KR+L+LVDD+ TEI +TLWGD A+ DG +W NPV+A KGVKV
Sbjct: 360 KLSKELFKRDLVLVDDSNTEIQMTLWGDRAREDGGQWMSNPVIAVKGVKV 409
BLAST of mRNA_Ecto-sp8_S_contig96266.31299.1 vs. uniprot
Match: A0A7S2RLC2_9STRA (Replication protein A subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLC2_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 6.640e-11 Identity = 28/50 (56.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query: 6 RAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVKV 55
R+G L KR+L +VDD+ TE+ LTLWGD A+ D S+W+G P++A K VKV
Sbjct: 321 RSGNTLHKRDLTVVDDSGTEVTLTLWGDKAQEDDSQWDGEPILAIKKVKV 370
BLAST of mRNA_Ecto-sp8_S_contig96266.31299.1 vs. uniprot
Match: W7T7F5_9STRA (Replication protein A subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T7F5_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 6.650e-11 Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 0
Query: 3 TRSRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVKV 55
T + G++++KR L L DDT TE+ LT+WG+ A +WE +P+VAFKGVKV
Sbjct: 393 TTKKDGREVEKRELTLCDDTGTEVRLTVWGERASKQPEQWENHPIVAFKGVKV 445
BLAST of mRNA_Ecto-sp8_S_contig96266.31299.1 vs. uniprot
Match: A0A4D9CR27_9STRA (Replication protein A subunit n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CR27_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 6.670e-11 Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 0
Query: 3 TRSRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVKV 55
T + G++++KR L L DDT TE+ LT+WG+ A +WE +P+VAFKGVKV
Sbjct: 321 TTKKDGREVEKRELTLCDDTGTEVRLTVWGERASKQPEQWENHPIVAFKGVKV 373
BLAST of mRNA_Ecto-sp8_S_contig96266.31299.1 vs. uniprot
Match: A0A813CA97_9DINO (Rpa1 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813CA97_9DINO) HSP 1 Score: 60.5 bits (145), Expect = 2.750e-9 Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0
Query: 5 SRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVKVQ 56
S+ GK L KR L L DD+ + +T+WGD AK + S +EGNPVVA KGV V+
Sbjct: 52 SKDGKDLVKRTLTLADDSGISMQVTIWGDRAKKEDSEFEGNPVVAMKGVSVK 103
BLAST of mRNA_Ecto-sp8_S_contig96266.31299.1 vs. uniprot
Match: A0A812W065_SYMMI (RPA1 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812W065_SYMMI) HSP 1 Score: 60.5 bits (145), Expect = 2.840e-9 Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0
Query: 5 SRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVKVQ 56
S+ GK L KR L L DD+ + +T+WGD AK + S +EGNPVVA KGV V+
Sbjct: 231 SKDGKDLVKRTLTLADDSGISMQVTIWGDRAKKEDSEFEGNPVVAMKGVSVK 282
BLAST of mRNA_Ecto-sp8_S_contig96266.31299.1 vs. uniprot
Match: A0A812Q238_9DINO (Replication protein A subunit n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812Q238_9DINO) HSP 1 Score: 59.3 bits (142), Expect = 7.200e-9 Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0
Query: 5 SRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVKVQ 56
S+ GK L KR L L DD+ + +T+WGD AK + S +EGNPVVA KGV V+
Sbjct: 186 SKDGKDLVKRTLTLADDSGISMQVTIWGDRAKKEDSVFEGNPVVAMKGVSVK 237
BLAST of mRNA_Ecto-sp8_S_contig96266.31299.1 vs. uniprot
Match: A0A7S2V6G1_9STRA (Replication protein A subunit n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6G1_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 9.820e-9 Identity = 29/54 (53.70%), Postives = 40/54 (74.07%), Query Frame = 0
Query: 3 TRSRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNP-VVAFKGVKV 55
++ + G+QL KR+LILVDD+ E+ LT+W +MAK DGS W GNP +V K V+V
Sbjct: 154 SQKQGGRQLQKRDLILVDDSGAEVKLTVWNEMAK-DGSMWVGNPTLVGAKNVRV 206 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig96266.31299.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp8_S_contig96266.31299.1 ID=prot_Ecto-sp8_S_contig96266.31299.1|Name=mRNA_Ecto-sp8_S_contig96266.31299.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=56bpback to top |