prot_Ecto-sp8_S_contig9625.31296.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9625.31296.1
Unique Nameprot_Ecto-sp8_S_contig9625.31296.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length560
Homology
BLAST of mRNA_Ecto-sp8_S_contig9625.31296.1 vs. uniprot
Match: A0A6H5K8R4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8R4_9PHAE)

HSP 1 Score: 580 bits (1495), Expect = 1.180e-182
Identity = 467/559 (83.54%), Postives = 473/559 (84.62%), Query Frame = 0
Query:    1 AFRGNESLHLRRLLRVVEHGASLLDHKKDVDAAATPAVAASTAAPASEGEAPAXXXXXGPVAGGNAGTVSAAEQQLQGAAAELPGDGDGRDASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLGRIXXXXXXXXXXXXXXXXXXXXXXXXXGQKK--SSFVLSPEEATWIRRGLELPMQAMGNTQPALKEADKGRLESFRLTQAYALKRPRQAARECFEEAAAGGVASKTSSWGERLSPESASALESVWESDAVWPLMQTPLLSWDLTTLLVGGVSMARSWSNRAGVARVVCLARLCQALLQPELCLRGPGGXXXXXXXXXXXXXXXXXXXXXXXPELSKGXXXXXXASALELLRGVLAEATGTPVSRLAPVGKELVSMCYSSWTPFLRCSALLLVASCSTDNSNEASDANNSCSASGGAVEDEWRQRLASAYGSSARLSFTTTSYDSNGHTRKXXXXXXXXXXXXXXXXXXXXAATLADDGGASEIDXXXXXXXXXGVECLAAVQELCSALGVPSPQAVVSSGPAMGMVRAWGRQYKEAFGPAQPTAGVCRIGSE 557
            AFRGNESLHLRRLLRVVEHGASLLDH  +VDAA                     XXXX       AG VS A+QQLQGAAA LPGDGDGRD SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXX      SSF+LSPEEATW+RR LELPMQAMGNTQP LKEADKGRLESFRL QAYALKRPRQAARECFEEAAAGG  SKTSSW ERLSPESASALESVWESDAVWPLMQ P+LSWDLTTL+VGGVSMARSWSNRAGVAR VCLARLCQALLQPELCLRGPGG XXXXXXXXXXXXXXXXXXXXX   LSK XXXX  ASALELLRGVLAEATGTPVSRLAPVGKELVSMCYSSW PFLRCSALLLVASCSTDNSNE SDAN   S SGG VEDEWRQRLASAYGSSARLSFTTT YDSNGHTRK XXXXXXXXXXXXXXXXXXX              XXXXXXXXXGVECLAAVQELCSALGVPSPQAVVSS  AMGMVRAWGRQYKEAFGPAQP AGVCRIGSE
Sbjct: 1727 AFRGNESLHLRRLLRVVEHGASLLDHNNNVDAAXXXXXXXXXXXXXXXXX----XXXXXXXXXXXAGAVSEAQQQLQGAAAVLPGDGDGRDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFILSPEEATWMRRALELPMQAMGNTQPDLKEADKGRLESFRLRQAYALKRPRQAARECFEEAAAGGATSKTSSWSERLSPESASALESVWESDAVWPLMQIPILSWDLTTLVVGGVSMARSWSNRAGVARAVCLARLCQALLQPELCLRGPGGSXXXXXXXXXXXXXXXXXXXXX--RLSKXXXXX--ASALELLRGVLAEATGTPVSRLAPVGKELVSMCYSSWAPFLRCSALLLVASCSTDNSNEGSDANRG-STSGGGVEDEWRQRLASAYGSSARLSFTTTGYDSNGHTRKRXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXGVECLAAVQELCSALGVPSPQAVVSSSLAMGMVRAWGRQYKEAFGPAQPEAGVCRIGSE 2273          
BLAST of mRNA_Ecto-sp8_S_contig9625.31296.1 vs. uniprot
Match: D7G3D4_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D4_ECTSI)

HSP 1 Score: 565 bits (1455), Expect = 1.500e-180
Identity = 440/570 (77.19%), Postives = 444/570 (77.89%), Query Frame = 0
Query:    1 AFRGNESLHLRRLLRVVEHGASLLDHKKDVDAAATPAVAASTAAPASEGEAPAXXXXX-----------GPVAGGNAGTVSAAEQQLQGAAAELPGDGDGRDASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLGRIXXXXXXXXXXXXXXXXXXXXXXXXXGQKKSSFVLSPEEATWIRRGLELPMQAMGNTQPALKEADKGRLESFRLTQAYALKRPRQAARECFEEAAAGGVASKTSSWGERLSPESASALESVWESDAVWPLMQTPLLSWDLTTLLVGGVSMARSWSNRAGVARVVCLARLCQALLQPELCLRGPGGXXXXXXXXXXXXXXXXXXXXXXX-PELSKGXXXXXXA-SALELLRGVLAEATGTPVSRLAPVGKELVSMCYSSWTPFLRCSALLLVASCSTDNSNEASDANNSCSASGGAVEDEWRQRLASAYGSSARLSFTTTSYDSNGHTRKXXXXXXXXXXXXXXXXXXXXAATLADDGGASEIDXXXXXXXXXGVECLAAVQELCSALGVPSPQAVVSSGPAMGMVRAWGRQYKEAFGPAQPTAGVCRIGSE 557
            AFRGNESLHLRRLLRVVEHG SLLDH  DVDAAATPAVAAST           XXXXX           GPVAGGNAG VSAA++QLQGAAA LPGDGDGRD SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KLGRIXXXXXXXXXXXXXXXXXXXXXXXXXGQKKSSFVLSPEEATWIRRGLELPMQAMGNTQP LKEADKGRLESFRL QAYALKRPRQAARECFEEAAAGG+ASKTSSW ERLSPESASALESVWE DAVWPLMQTPLLSWDLTTLLVG VSMARSWSNRAGVAR VCLARLCQALLQPELCLRGPGGXXXXXXXXXXXXXXXXXXXXXXX P LSKGXXXXXX  SALELLRGVLAEATGTPVSRLAPVGKELVSMCYSSW PFLRCSALLLVASCSTDNSNEASDANNS SASGGAVE                                                                                    ELCSALGVPSPQAVVSSGPAMGMVRAWGRQY+EAFG AQPTAGVCRIGSE
Sbjct:  841 AFRGNESLHLRRLLRVVEHGTSLLDHNNDVDAAATPAVAASTXXXXXXXXXXXXXXXXXXXXXXXXXXXGPVAGGNAGAVSAAQEQLQGAAAVLPGDGDGRDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-KLGRIXXXXXXXXXXXXXXXXXXXXXXXXXGQKKSSFVLSPEEATWIRRGLELPMQAMGNTQPDLKEADKGRLESFRLRQAYALKRPRQAARECFEEAAAGGLASKTSSWSERLSPESASALESVWEPDAVWPLMQTPLLSWDLTTLLVGSVSMARSWSNRAGVARAVCLARLCQALLQPELCLRGPGGXXXXXXXXXXXXXXXXXXXXXXXXPGLSKGXXXXXXXXSALELLRGVLAEATGTPVSRLAPVGKELVSMCYSSWAPFLRCSALLLVASCSTDNSNEASDANNSSSASGGAVE------------------------------------------------------------------------------------ELCSALGVPSPQAVVSSGPAMGMVRAWGRQYREAFGSAQPTAGVCRIGSE 1325          
BLAST of mRNA_Ecto-sp8_S_contig9625.31296.1 vs. uniprot
Match: A0A836CB31_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB31_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.700e-11
Identity = 66/141 (46.81%), Postives = 78/141 (55.32%), Query Frame = 0
Query:  256 WPLMQTPLLSWDLTTLLVGGVSMARSWSNRAGVARVVCLARLCQALLQPELCLRGPGGXXXXXXXXXXXXXXXXXXXXXXXPELSKGXXXXXXASALELLRGVLAEATGTPVSRLAPVGKELVSMCYSSWTPFLRCSALLL 396
            WP++Q PLL+WDL+TL     ++  S   R    R VCLARL Q  +QPE CL G               XXXXXXXXXXX      XXXXXX  ALE  RG LAE  G  V+  AP G  L+    ++W PFLR + LLL
Sbjct: 1869 WPVLQVPLLAWDLSTLAAALATLVHSAEQRRAAVRAVCLARLAQLCVQPEFCLLGT---------VAATAXXXXXXXXXXXXXXXXXXXXXXXXXALEAQRGALAEEIGLAVAATAPRGAALLHAALAAWLPFLRYAVLLL 2000          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9625.31296.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K8R4_9PHAE1.180e-18283.54E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
D7G3D4_ECTSI1.500e-18077.19E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A836CB31_9STRA1.700e-1146.81E3 ubiquitin-protein ligase n=1 Tax=Tribonema minu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9625contigEcto-sp8_S_contig9625:44..4472 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9625.31296.1mRNA_Ecto-sp8_S_contig9625.31296.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9625 44..4472 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9625.31296.1 ID=prot_Ecto-sp8_S_contig9625.31296.1|Name=mRNA_Ecto-sp8_S_contig9625.31296.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=560bp
AFRGNESLHLRRLLRVVEHGASLLDHKKDVDAAATPAVAASTAAPASEGE
APAAAAAAGPVAGGNAGTVSAAEQQLQGAAAELPGDGDGRDASSSSSPTT
TGGSGGVVVAAAAAAPVGGVVAAIKLGRIFGGAAVVPPPEGIRALGGGGA
GGGRGQKKSSFVLSPEEATWIRRGLELPMQAMGNTQPALKEADKGRLESF
RLTQAYALKRPRQAARECFEEAAAGGVASKTSSWGERLSPESASALESVW
ESDAVWPLMQTPLLSWDLTTLLVGGVSMARSWSNRAGVARVVCLARLCQA
LLQPELCLRGPGGAAAAAAAAAAAAGGGRKSGGGRRPELSKGTAAAAAAS
ALELLRGVLAEATGTPVSRLAPVGKELVSMCYSSWTPFLRCSALLLVASC
STDNSNEASDANNSCSASGGAVEDEWRQRLASAYGSSARLSFTTTSYDSN
GHTRKRRNNNKPAAPAPAPATATATAATLADDGGASEIDDDGDDDDGGGV
ECLAAVQELCSALGVPSPQAVVSSGPAMGMVRAWGRQYKEAFGPAQPTAG
VCRIGSEVP*
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