prot_Ecto-sp8_S_contig9619.31289.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9619.31289.1
Unique Nameprot_Ecto-sp8_S_contig9619.31289.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length554
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9619.31289.1 vs. uniprot
Match: A0A6H5JF42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF42_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 5.350e-69
Identity = 445/586 (75.94%), Postives = 449/586 (76.62%), Query Frame = 0 
Query:    1 MMKREQAERSRQRLEQKVKQNELQQQLAAKKDRDTTQIKQRVAQQEKERIAGIRARGDDQLWLSHRNLRQVPSEYYQAPEWRGKLVDLVLLDLQDNRLAELPPNFLAEMVSLRKLDISKNRQAVCNYLGRGLSFIANEHLANLDHLQVLILSRNELRELPPALGELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------GENAVVELAAAWGGMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLERRLPDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASKNALGNLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEMVELEKNVKDLSLEQNPLPVLPDKWHLRFGLEAHATRPAGYTSNEV 554
            M+KREQAERSRQRLEQKVKQNELQQQLAAKKDRDT QIKQRVAQQEKERIAGIRARGDDQLWLSHRNLRQVPSEYYQ PEWRGKLVDLVLLDLQDNRLA                                   IANEHL NLDHLQVL+LSRNELRELPPALG+L                                                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                GENAVVELAAAWGGMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLERRLPDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASKNALGNLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEMVELEKNVKDL+LEQNPLPVLPDKWHLRFGLEAHATRPAGYTSNEV
Sbjct:  467 MIKREQAERSRQRLEQKVKQNELQQQLAAKKDRDTAQIKQRVAQQEKERIAGIRARGDDQLWLSHRNLRQVPSEYYQDPEWRGKLVDLVLLDLQDNRLAXXXXXXXXXXXXXX---------------------IANEHLVNLDHLQVLVLSRNELRELPPALGKLTKLQHLVISKSNGVAHVCYAHRCVRYLHASRKLLVSILSIRRNEIGQLPDELGGMHALRSLRAHSNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIGENAVVELAAAWGGMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLERRLPDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASKNALGNLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEMVELEKNVKDLNLEQNPLPVLPDKWHLRFGLEAHATRPAGYTSNEV 1031
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9619.31289.1 vs. uniprot
Match: D7FW32_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW32_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 2.970e-51
Identity = 105/108 (97.22%), Postives = 106/108 (98.15%), Query Frame = 0 
Query:    1 MMKREQAERSRQRLEQKVKQNELQQQLAAKKDRDTTQIKQRVAQQEKERIAGIRARGDDQLWLSHRNLRQVPSEYYQAPEWRGKLVDLVLLDLQDNRLAELPPNFLAE 108
            MMKREQAERSRQRLEQKVKQNEL QQLAAKKDRDTTQIKQRVAQQEKERIAGIRARGDDQLWLSHRNLRQVPSEYYQ P+WRGKLVDLVLLDLQDNRLAELPPNFLAE
Sbjct:  467 MMKREQAERSRQRLEQKVKQNELHQQLAAKKDRDTTQIKQRVAQQEKERIAGIRARGDDQLWLSHRNLRQVPSEYYQDPKWRGKLVDLVLLDLQDNRLAELPPNFLAE 574
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9619.31289.1 vs. uniprot
Match: D7FW31_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW31_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 3.220e-19
Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 0 
Query:  507 LEMVELEKNVKDLSLEQNPLPVLPDKWHLRFGLEAHATRPAGYTSNEV 554
            LEMVELEKNVKDL+LEQNPLPVLPDKWHLRFGLEAHATRPAGYTSNEV
Sbjct:  358 LEMVELEKNVKDLNLEQNPLPVLPDKWHLRFGLEAHATRPAGYTSNEV 405
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9619.31289.1 vs. uniprot
Match: A0A482S2R1_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2R1_9ARCH)

HSP 1 Score: 59.7 bits (143), Expect = 1.010e-5
Identity = 43/121 (35.54%), Postives = 72/121 (59.50%), Query Frame = 0 
Query:    2 MKREQAERSRQRLEQKVKQNELQQQLAAKKDRDTTQIKQRVAQQEKERIAGIRARGDDQLWLSHRNLRQVPSEYYQAPEWRGKLVDLVLLDLQDNRLAELP-PNFLAEMVSLRKLDISKNR 121
            +KREQAER+R+R+E+KV +N+LQ Q      ++  +    + +++  +   IR++G D+L +S + LR++P + Y+    + KL  L+ LDL  N+L  LP   F A +  LR L +  NR
Sbjct:  133 LKREQAERARKRVEEKVLRNKLQLQXXXXXXKERAERSAELKERDHLKKQEIRSKGLDKLDMSLKGLREIPLDLYRGVNEQIKLSYLLTLDLSQNKLEVLPGEEFCASLSDLRVLKLGGNR 253
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9619.31289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JF42_9PHAE5.350e-6975.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FW32_ECTSI2.970e-5197.22Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FW31_ECTSI3.220e-1997.92Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A482S2R1_9ARCH1.010e-535.54Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..31
NoneNo IPR availableCOILSCoilCoilcoord: 502..522
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 327..346
e-value: 230.0
score: 3.3
coord: 420..439
e-value: 15.0
score: 12.3
coord: 235..255
e-value: 330.0
score: 2.1
coord: 397..416
e-value: 190.0
score: 3.9
coord: 489..508
e-value: 580.0
score: 0.2
coord: 258..277
e-value: 8.1
score: 14.4
coord: 443..462
e-value: 220.0
score: 3.5
coord: 189..208
e-value: 30.0
score: 10.0
coord: 143..162
e-value: 36.0
score: 9.5
coord: 166..185
e-value: 290.0
score: 2.6
NoneNo IPR availablePANTHERPTHR45752FAMILY NOT NAMEDcoord: 302..437
coord: 214..391
coord: 85..252
coord: 373..530
coord: 166..326
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 61..367
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 297..531
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 212..234
e-value: 44.0
score: 8.0
coord: 397..420
e-value: 0.16
score: 21.1
coord: 327..349
e-value: 1.4
score: 17.9
coord: 350..373
e-value: 2.5
score: 17.1
coord: 236..257
e-value: 14.0
score: 12.1
coord: 143..164
e-value: 2.4
score: 17.2
coord: 258..281
e-value: 1.1
score: 18.3
coord: 466..488
e-value: 370.0
score: 0.4
coord: 166..188
e-value: 22.0
score: 10.5
coord: 189..211
e-value: 25.0
score: 10.1
coord: 443..465
e-value: 18.0
score: 11.2
coord: 489..512
e-value: 1.1
score: 18.3
coord: 85..108
e-value: 1.7
score: 17.6
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 260..317
e-value: 7.6E-7
score: 28.8
coord: 145..202
e-value: 3.6E-9
score: 36.3
coord: 445..502
e-value: 2.3E-6
score: 27.3
coord: 329..386
e-value: 1.2E-8
score: 34.6
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 399..417
e-value: 0.23
score: 12.1
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 491..512
score: 6.257
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 445..466
score: 6.919
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 468..489
score: 6.026
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 260..281
score: 7.104
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 352..373
score: 6.919
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 422..444
score: 6.241
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 375..397
score: 5.533
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 145..167
score: 6.911
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 168..189
score: 6.026
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 214..235
score: 5.987
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 306..328
score: 4.786
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 87..107
score: 6.303
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 237..258
score: 7.604
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 515..536
score: 5.733
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 191..212
score: 5.178
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 399..420
score: 7.258
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 329..350
score: 6.88
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 295..431
e-value: 4.8E-34
score: 119.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 37..206
e-value: 3.9E-28
score: 99.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 432..531
e-value: 6.0E-19
score: 70.0
coord: 207..294
e-value: 1.5E-19
score: 71.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9619contigEcto-sp8_S_contig9619:322..7133 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9619.31289.1mRNA_Ecto-sp8_S_contig9619.31289.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9619 322..7163 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9619.31289.1 ID=prot_Ecto-sp8_S_contig9619.31289.1|Name=mRNA_Ecto-sp8_S_contig9619.31289.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=554bp
MMKREQAERSRQRLEQKVKQNELQQQLAAKKDRDTTQIKQRVAQQEKERI
AGIRARGDDQLWLSHRNLRQVPSEYYQAPEWRGKLVDLVLLDLQDNRLAE
LPPNFLAEMVSLRKLDISKNRQAVCNYLGRGLSFIANEHLANLDHLQVLI
LSRNELRELPPALGELSKLQHLVISKNEIGQLPDELGGMHALRSLRAHSN
NLETLPTSVDGLVSLELCDLSSNRLLTLPNDFSYATALTRLDLSSNRLRH
LPLDFGLLFSLQSLDVSCNQLADLPTTVSSLKSLQILKIGENAVVELAAA
WGGMTSLVELEAQTNRIGRVSPNIGELLQLQRLDLCRNAIEELPATFGLL
TKLHDINLRSNLITKIPDEVGALKQLNTLGLAHNRLERRLPDHLGMLTRL
THLDISSNSIGSLPPSLGALEDLETLNASKNALGNLPQNFTFLTSLTDLD
LSCNRFKDMPMLLCGMKNLLRLDLTSNIICTLPREIGALTMLTKLHLRHN
LLKSLPLEMVELEKNVKDLSLEQNPLPVLPDKWHLRFGLEAHATRPAGYT
SNEV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf