prot_Ecto-sp8_S_contig96181.31288.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig96181.31288.1
Unique Nameprot_Ecto-sp8_S_contig96181.31288.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length43
Homology
BLAST of mRNA_Ecto-sp8_S_contig96181.31288.1 vs. uniprot
Match: A0A6H5JIA4_9PHAE (PHD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA4_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 6.660e-26
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0
Query:    1 NEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMV 40
            NEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMV
Sbjct:  233 NEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMV 272          
BLAST of mRNA_Ecto-sp8_S_contig96181.31288.1 vs. uniprot
Match: D7FVE0_ECTSI (PHD finger protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE0_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 6.740e-26
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0
Query:    1 NEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMV 40
            NEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMV
Sbjct:  224 NEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMV 263          
BLAST of mRNA_Ecto-sp8_S_contig96181.31288.1 vs. uniprot
Match: A0A0A9NUC7_ARUDO (PHD-type domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9NUC7_ARUDO)

HSP 1 Score: 78.2 bits (191), Expect = 5.850e-18
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 NEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGL 37
            NEP YC+C QV +GDMI CDNE+CE GEWFHY CVGL
Sbjct:   28 NEPTYCICHQVSYGDMIACDNENCEGGEWFHYSCVGL 64          
BLAST of mRNA_Ecto-sp8_S_contig96181.31288.1 vs. uniprot
Match: A0A484LD43_9ASTE (PHD-type domain-containing protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484LD43_9ASTE)

HSP 1 Score: 76.6 bits (187), Expect = 4.140e-17
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 NEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGL 37
            NEP YCVC QV +GDMI CDNE+C+ GEWFHY CVGL
Sbjct:   51 NEPTYCVCHQVSFGDMIACDNENCQGGEWFHYACVGL 87          
BLAST of mRNA_Ecto-sp8_S_contig96181.31288.1 vs. uniprot
Match: A0A2P2J926_RHIMU (PHD finger protein ING n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2J926_RHIMU)

HSP 1 Score: 77.0 bits (188), Expect = 4.290e-17
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 NEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGL 37
            NEP YCVC QV +GDMI CDNE+C+ GEWFHY CVGL
Sbjct:   61 NEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGL 97          
BLAST of mRNA_Ecto-sp8_S_contig96181.31288.1 vs. uniprot
Match: A0A8J4Q3R0_9ROSI (PHD-type domain-containing protein n=1 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4Q3R0_9ROSI)

HSP 1 Score: 77.0 bits (188), Expect = 1.050e-16
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 NEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGL 37
            NEP YCVC QV +GDMI CDNE+C+ GEWFHY CVGL
Sbjct:   98 NEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGL 134          
BLAST of mRNA_Ecto-sp8_S_contig96181.31288.1 vs. uniprot
Match: A0A8D7FNA3_MUSAM (PHD finger protein ING (Fragment) n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A8D7FNA3_MUSAM)

HSP 1 Score: 78.2 bits (191), Expect = 1.240e-16
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 NEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGL 37
            NEP YCVC QV +GDMI CDNE+CE GEWFHY CVGL
Sbjct:  160 NEPTYCVCHQVSFGDMIACDNENCEGGEWFHYSCVGL 196          
BLAST of mRNA_Ecto-sp8_S_contig96181.31288.1 vs. uniprot
Match: UPI000233BD5F (PHD finger protein ING2 n=1 Tax=Glycine max TaxID=3847 RepID=UPI000233BD5F)

HSP 1 Score: 77.0 bits (188), Expect = 1.290e-16
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 NEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGL 37
            NEP YCVC QV +GDMI CDNE+C+ GEWFHY CVGL
Sbjct:  106 NEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGL 142          
BLAST of mRNA_Ecto-sp8_S_contig96181.31288.1 vs. uniprot
Match: UPI001C4C1CDF (PHD finger protein ING2-like isoform X2 n=1 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4C1CDF)

HSP 1 Score: 78.2 bits (191), Expect = 1.450e-16
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 NEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGL 37
            NEP YCVC QV +GDMI CDNE+CE GEWFHY CVGL
Sbjct:  169 NEPTYCVCHQVSFGDMIACDNENCEGGEWFHYSCVGL 205          
BLAST of mRNA_Ecto-sp8_S_contig96181.31288.1 vs. uniprot
Match: A0A022R1M1_ERYGU (PHD finger protein ING n=4 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022R1M1_ERYGU)

HSP 1 Score: 78.6 bits (192), Expect = 1.560e-16
Identity = 28/42 (66.67%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    1 NEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVVS 42
            NEP+YCVC QV +GDMI CDNE+C+ GEWFHY CVGL     
Sbjct:  195 NEPIYCVCHQVSFGDMIACDNENCQGGEWFHYACVGLSQETG 236          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig96181.31288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIA4_9PHAE6.660e-26100.00PHD domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FVE0_ECTSI6.740e-26100.00PHD finger protein-related n=1 Tax=Ectocarpus sili... [more]
A0A0A9NUC7_ARUDO5.850e-1875.68PHD-type domain-containing protein n=1 Tax=Arundo ... [more]
A0A484LD43_9ASTE4.140e-1775.68PHD-type domain-containing protein n=1 Tax=Cuscuta... [more]
A0A2P2J926_RHIMU4.290e-1775.68PHD finger protein ING n=1 Tax=Rhizophora mucronat... [more]
A0A8J4Q3R0_9ROSI1.050e-1675.68PHD-type domain-containing protein n=1 Tax=Castane... [more]
A0A8D7FNA3_MUSAM1.240e-1678.38PHD finger protein ING (Fragment) n=1 Tax=Musa acu... [more]
UPI000233BD5F1.290e-1675.68PHD finger protein ING2 n=1 Tax=Glycine max TaxID=... [more]
UPI001C4C1CDF1.450e-1678.38PHD finger protein ING2-like isoform X2 n=1 Tax=Zi... [more]
A0A022R1M1_ERYGU1.560e-1666.67PHD finger protein ING n=4 Tax=Erythranthe guttata... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..42
e-value: 4.9E-18
score: 66.8
IPR028651ING familyPANTHERPTHR10333INHIBITOR OF GROWTH PROTEINcoord: 1..38
NoneNo IPR availablePANTHERPTHR10333:SF42INHIBITOR OF GROWTH PROTEINcoord: 1..38
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 1..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig96181contigEcto-sp8_S_contig96181:33..554 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig96181.31288.1mRNA_Ecto-sp8_S_contig96181.31288.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig96181 33..554 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig96181.31288.1 ID=prot_Ecto-sp8_S_contig96181.31288.1|Name=mRNA_Ecto-sp8_S_contig96181.31288.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=43bp
NEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR028651ING_fam
IPR011011Znf_FYVE_PHD