prot_Ecto-sp8_S_contig95911.31241.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig95911.31241.1
Unique Nameprot_Ecto-sp8_S_contig95911.31241.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length78
Homology
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BLAST of mRNA_Ecto-sp8_S_contig95911.31241.1 vs. uniprot
Match: D8LN11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN11_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 4.530e-13
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 0 
Query:    1 MALFRWYLGKALLENGEIDEALPHLAESVSIEPEN 35
            MALFRWYLGKALLENGEIDEALPHLAESVSI+PEN
Sbjct:  924 MALFRWYLGKALLENGEIDEALPHLAESVSIDPEN 958
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig95911.31241.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LN11_ECTSI4.530e-1397.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 36..69
e-value: 65.0
score: 7.8
coord: 2..35
e-value: 1.8
score: 17.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 2..35
score: 9.322
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 6..77
e-value: 2.4E-10
score: 42.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 4..76
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 2..69
score: 12.023

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig95911contigEcto-sp8_S_contig95911:126..582 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig95911.31241.1mRNA_Ecto-sp8_S_contig95911.31241.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig95911 100..582 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig95911.31241.1 ID=prot_Ecto-sp8_S_contig95911.31241.1|Name=mRNA_Ecto-sp8_S_contig95911.31241.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=78bp
MALFRWYLGKALLENGEIDEALPHLAESVSIEPENAKYRHTLGLAKCVTG
DEAGAREDLLEAALLDEEDAEDRYQLRM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom