prot_Ecto-sp8_S_contig95825.31225.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig95825.31225.1
Unique Nameprot_Ecto-sp8_S_contig95825.31225.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length164
Homology
BLAST of mRNA_Ecto-sp8_S_contig95825.31225.1 vs. uniprot
Match: A0A1S6GLG8_9MAXI (RNA-binding protein pno1 n=1 Tax=Pseudodiaptomus poplesia TaxID=213370 RepID=A0A1S6GLG8_9MAXI)

HSP 1 Score: 240 bits (612), Expect = 1.250e-77
Identity = 118/163 (72.39%), Postives = 136/163 (83.44%), Query Frame = 0
Query:    2 VDQTEKEDSNMDTESIESGVLSGVEGTLPKAKAAFPPIKREKLADGSEVRKIPVPSHRYTPLKENWMKIFEPIVEHLKMQVRFNLKTRNVEVRTCKDTEDVTNLQKAADFVRAFIFGFEVEDALALVRLDDLFIDSFEIQDVKTLKGDHLARAIGRVAGKGGR 164
            +D  E E    +++  E G  +     L   K AFPPIK+EKLADG+E+RK+PVP HRY PLKENWMKIFEPIVEHLK+Q+RFNLK+RNVE+RTCKDT DV NLQK ADFVRAFI GF+V+DALAL+RLDDLF+DSFE+QDVKTLKGDHLARAIGRVAGKGGR
Sbjct:   30 MDVDEPEPGTTESQPAEDGAEN-----LEVLKPAFPPIKKEKLADGTEIRKVPVPQHRYAPLKENWMKIFEPIVEHLKLQIRFNLKSRNVEIRTCKDTVDVQNLQKGADFVRAFILGFDVDDALALIRLDDLFVDSFEVQDVKTLKGDHLARAIGRVAGKGGR 187          
BLAST of mRNA_Ecto-sp8_S_contig95825.31225.1 vs. uniprot
Match: UPI000C763371 (RNA-binding protein PNO1-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C763371)

HSP 1 Score: 238 bits (606), Expect = 8.110e-77
Identity = 112/130 (86.15%), Postives = 125/130 (96.15%), Query Frame = 0
Query:   35 AFPPIKREKLADGSEVRKIPVPSHRYTPLKENWMKIFEPIVEHLKMQVRFNLKTRNVEVRTCKDTEDVTNLQKAADFVRAFIFGFEVEDALALVRLDDLFIDSFEIQDVKTLKGDHLARAIGRVAGKGGR 164
            AFPP+K+EKLADG+EVRK+PVP HRY+PLKENWMK+FEPIVEHLK+QVRFNLK++NVE+RTCKDT D+ NLQKAADFVRAF+ GFEVEDALALVRLDDLFIDSF +QDVKTLKGDHLARAIGRVAGKGGR
Sbjct:   51 AFPPLKKEKLADGTEVRKVPVPQHRYSPLKENWMKLFEPIVEHLKLQVRFNLKSKNVEIRTCKDTTDIQNLQKAADFVRAFVLGFEVEDALALVRLDDLFIDSFVVQDVKTLKGDHLARAIGRVAGKGGR 180          
BLAST of mRNA_Ecto-sp8_S_contig95825.31225.1 vs. uniprot
Match: A0A6A4VJJ0_AMPAM (RNA-binding protein PNO1 n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VJJ0_AMPAM)

HSP 1 Score: 221 bits (562), Expect = 3.430e-70
Identity = 108/153 (70.59%), Postives = 128/153 (83.66%), Query Frame = 0
Query:   12 MDTESIESGVLSGVEGTLPKAKAAFPPIKREKLADGSEVRKIPVPSHRYTPLKENWMKIFEPIVEHLKMQVRFNLKTRNVEVRTCKDTEDVTNLQKAADFVRAFIFGFEVEDALALVRLDDLFIDSFEIQDVKTLKGDHLARAIGRVAGKGGR 164
            MD E+ E G    V       +  FPP+K+EKL +G+EVRKIPVP+HRYTPLKENWMKIF P+VE L +Q+RFNLK RNVE+RTCK+T DV+NLQKAADFVRAFI GFEV+DALAL+RLDD+FIDSF+IQDVK LKGDHL+RAIGR+AGK G+
Sbjct:   34 MDDEAAEQGSAMDV-----SQRPYFPPVKKEKLQNGTEVRKIPVPAHRYTPLKENWMKIFTPVVEQLNLQIRFNLKIRNVEIRTCKETTDVSNLQKAADFVRAFILGFEVDDALALLRLDDIFIDSFDIQDVKQLKGDHLSRAIGRLAGKNGK 181          
BLAST of mRNA_Ecto-sp8_S_contig95825.31225.1 vs. uniprot
Match: A0A4Y7LRS8_9CRUS (EOG090X0D0V n=1 Tax=Eubosmina coregoni TaxID=186181 RepID=A0A4Y7LRS8_9CRUS)

HSP 1 Score: 217 bits (552), Expect = 3.670e-69
Identity = 103/136 (75.74%), Postives = 124/136 (91.18%), Query Frame = 0
Query:   30 PKAKAAFPPIKREKLADGSEVRKIPVPSHRYTPLKENWMKIFEPIVEHLKMQVRFNLKTRNVEVRTCKDTEDVTNLQKAADFVRAFIFGFEVEDALALVRLDDLFIDSFEIQDVKT-LKGDHLARAIGRVAGKGGR 164
            P  + AFPP+KREKLADG+EVRKI VP+HRY+PLKENWMK+F PIVE L +Q+RFNLK R VE+R+CK+TED++NLQKAADFV+AFI GFEV+DALAL+RLDDLF+DSFEI+DVK+ LKGDHL RA+GR+AGKGGR
Sbjct:    6 PVQRPAFPPVKREKLADGTEVRKIAVPAHRYSPLKENWMKLFTPIVERLGLQIRFNLKNRQVEIRSCKETEDISNLQKAADFVKAFICGFEVDDALALIRLDDLFVDSFEIKDVKSSLKGDHLNRAVGRLAGKGGR 141          
BLAST of mRNA_Ecto-sp8_S_contig95825.31225.1 vs. uniprot
Match: A0A4Y7NJ55_9CRUS (EOG090X0D0V n=1 Tax=Moina brachiata TaxID=675436 RepID=A0A4Y7NJ55_9CRUS)

HSP 1 Score: 218 bits (554), Expect = 6.170e-69
Identity = 101/138 (73.19%), Postives = 126/138 (91.30%), Query Frame = 0
Query:   28 TLPKAKAAFPPIKREKLADGSEVRKIPVPSHRYTPLKENWMKIFEPIVEHLKMQVRFNLKTRNVEVRTCKDTEDVTNLQKAADFVRAFIFGFEVEDALALVRLDDLFIDSFEIQDVKT-LKGDHLARAIGRVAGKGGR 164
            ++ + + +FPP+KREKL+DG+E+RKI VP+HRY+PLKENWMKIF PIVEHL +Q+RFNLK+R VE+RTCK TED+ NLQKAADFV+AFI GF+VEDALAL+RLDDLF+DSFE++DVK+ LKGDHL RA+GR+AGKGGR
Sbjct:   42 SVSEERPSFPPVKREKLSDGTEIRKIAVPAHRYSPLKENWMKIFTPIVEHLHLQIRFNLKSRQVEIRTCKTTEDIANLQKAADFVKAFICGFDVEDALALIRLDDLFVDSFEVKDVKSSLKGDHLNRAVGRLAGKGGR 179          
BLAST of mRNA_Ecto-sp8_S_contig95825.31225.1 vs. uniprot
Match: A0A0K2TZA4_LEPSM (RNAbinding protein PNO1like [Ciona intestinalis] (Fragment) n=3 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2TZA4_LEPSM)

HSP 1 Score: 216 bits (550), Expect = 1.240e-68
Identity = 104/143 (72.73%), Postives = 127/143 (88.81%), Query Frame = 0
Query:   22 LSGVEGTLPKAKAAFPPIKREKLADGSEVRKIPVPSHRYTPLKENWMKIFEPIVEHLKMQVRFNLKTRNVEVRTCKDTEDVTNLQKAADFVRAFIFGFEVEDALALVRLDDLFIDSFEIQDVKTLKGDHLARAIGRVAGKGGR 164
            + G E TLPK     PP+KREKL+DG E+RKIPVP++RY+PLKENW+KIF P+VE LK+Q+RFNLKTRNVE+R   +T+D+ +LQKAADFVRAFIFGFEVEDALAL+RLDDLF+DSF++ DVK+LKGDHL+RAIGR+AGKGGR
Sbjct:   18 VQGEETTLPKF--LVPPVKREKLSDGIELRKIPVPNNRYSPLKENWLKIFNPVVEILKLQIRFNLKTRNVEIRNSAETKDLNHLQKAADFVRAFIFGFEVEDALALLRLDDLFLDSFQVTDVKSLKGDHLSRAIGRIAGKGGR 158          
BLAST of mRNA_Ecto-sp8_S_contig95825.31225.1 vs. uniprot
Match: A0A4Y7LWA9_9CRUS (EOG090X0D0V n=1 Tax=Daphnia atkinsoni TaxID=342845 RepID=A0A4Y7LWA9_9CRUS)

HSP 1 Score: 216 bits (551), Expect = 1.940e-68
Identity = 111/164 (67.68%), Postives = 136/164 (82.93%), Query Frame = 0
Query:    2 VDQTEKEDSNMDTESIESGVLSGVEGTLPKAKAAFPPIKREKLADGSEVRKIPVPSHRYTPLKENWMKIFEPIVEHLKMQVRFNLKTRNVEVRTCKDTEDVTNLQKAADFVRAFIFGFEVEDALALVRLDDLFIDSFEIQDVKT-LKGDHLARAIGRVAGKGGR 164
            V+Q EK + N +T S+E  V + V      ++ AFPP+KREKL  G E+RKI VP+HRY+PLKENWMK+F PIVEHL +Q+RFNLK R VE+RTCKDT+++ N+QKAADFV+AFI GFEVEDALAL+RLDDLF+DSFEI+DVK+ LKGDHL RAIGR+AGKGGR
Sbjct:   26 VNQAEKLNKN-ETTSMELTVETAV------SRPAFPPVKREKLDSGIEIRKIAVPAHRYSPLKENWMKLFTPIVEHLNLQIRFNLKNRQVEIRTCKDTQEIANVQKAADFVKAFICGFEVEDALALIRLDDLFVDSFEIKDVKSSLKGDHLNRAIGRLAGKGGR 182          
BLAST of mRNA_Ecto-sp8_S_contig95825.31225.1 vs. uniprot
Match: UPI001885990D (RNA-binding protein pno1-like isoform X2 n=2 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001885990D)

HSP 1 Score: 216 bits (551), Expect = 2.270e-68
Identity = 102/142 (71.83%), Postives = 123/142 (86.62%), Query Frame = 0
Query:   23 SGVEGTLPKAKAAFPPIKREKLADGSEVRKIPVPSHRYTPLKENWMKIFEPIVEHLKMQVRFNLKTRNVEVRTCKDTEDVTNLQKAADFVRAFIFGFEVEDALALVRLDDLFIDSFEIQDVKTLKGDHLARAIGRVAGKGGR 164
            +G   +    +  FPP+KREKL +G EVRKIPVP+HRYTPLKENWMKIF P+VE L +Q+RFNLK RNVE+RTCK+T DV++LQKAADFVRAFI GFEV+DALAL+RLDD+FIDSF++QDVK LKGDHL+RAIGR+AGK G+
Sbjct:   51 AGEAASATAGRPYFPPVKREKLQNGVEVRKIPVPAHRYTPLKENWMKIFTPVVEQLNLQIRFNLKIRNVEIRTCKETTDVSHLQKAADFVRAFILGFEVDDALALLRLDDIFIDSFDVQDVKHLKGDHLSRAIGRLAGKNGK 192          
BLAST of mRNA_Ecto-sp8_S_contig95825.31225.1 vs. uniprot
Match: UPI001F4F6E1B (RNA-binding protein pno1 n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F4F6E1B)

HSP 1 Score: 215 bits (548), Expect = 3.220e-68
Identity = 107/143 (74.83%), Postives = 125/143 (87.41%), Query Frame = 0
Query:   24 GVEGTLPKAKAAFPPIKREK--LADGSEVRKIPVPSHRYTPLKENWMKIFEPIVEHLKMQVRFNLKTRNVEVRTCKDTEDVTNLQKAADFVRAFIFGFEVEDALALVRLDDLFIDSFEIQDVKTLKGDHLARAIGRVAGKGGR 164
            G+EG   KAK    P KR+K   A+  EVRK+PVP+HRYTPLKENWMKIF P+VEHL +Q+RFNLKTR+VE+RTCK+TED+ NLQKAADFVRAF++GFEVEDALAL+RLDDLFI+SFEI DVK LKGDHL+RAIGR+AGKGGR
Sbjct:   26 GIEG---KAKPNSLPAKRQKNISAEKVEVRKVPVPAHRYTPLKENWMKIFTPVVEHLHLQIRFNLKTRHVEIRTCKETEDIANLQKAADFVRAFVYGFEVEDALALLRLDDLFIESFEINDVKPLKGDHLSRAIGRLAGKGGR 165          
BLAST of mRNA_Ecto-sp8_S_contig95825.31225.1 vs. uniprot
Match: C1BPH4_CALRO (RNA-binding protein pno1 n=2 Tax=Caligus rogercresseyi TaxID=217165 RepID=C1BPH4_CALRO)

HSP 1 Score: 214 bits (546), Expect = 4.860e-68
Identity = 101/139 (72.66%), Postives = 123/139 (88.49%), Query Frame = 0
Query:   26 EGTLPKAKAAFPPIKREKLADGSEVRKIPVPSHRYTPLKENWMKIFEPIVEHLKMQVRFNLKTRNVEVRTCKDTEDVTNLQKAADFVRAFIFGFEVEDALALVRLDDLFIDSFEIQDVKTLKGDHLARAIGRVAGKGGR 164
            E +    K+  PP+KREKL++G EVRK+PVP+HRYTPLKENW+KIF P+VE LK+Q+RFNLK+RNVE+R   +T+D+ +LQKAADFVRAFIFGFEVEDALAL+RLDDLF+DSFEI DVK+LKGDH +RAIGR+AGKGGR
Sbjct:   18 ESSKETQKSIVPPVKREKLSNGLEVRKVPVPNHRYTPLKENWLKIFSPVVEILKLQIRFNLKSRNVEIRNSSNTQDLNHLQKAADFVRAFIFGFEVEDALALLRLDDLFLDSFEISDVKSLKGDHKSRAIGRIAGKGGR 156          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig95825.31225.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1S6GLG8_9MAXI1.250e-7772.39RNA-binding protein pno1 n=1 Tax=Pseudodiaptomus p... [more]
UPI000C7633718.110e-7786.15RNA-binding protein PNO1-like n=1 Tax=Eurytemora a... [more]
A0A6A4VJJ0_AMPAM3.430e-7070.59RNA-binding protein PNO1 n=2 Tax=Amphibalanus amph... [more]
A0A4Y7LRS8_9CRUS3.670e-6975.74EOG090X0D0V n=1 Tax=Eubosmina coregoni TaxID=18618... [more]
A0A4Y7NJ55_9CRUS6.170e-6973.19EOG090X0D0V n=1 Tax=Moina brachiata TaxID=675436 R... [more]
A0A0K2TZA4_LEPSM1.240e-6872.73RNAbinding protein PNO1like [Ciona intestinalis] (... [more]
A0A4Y7LWA9_9CRUS1.940e-6867.68EOG090X0D0V n=1 Tax=Daphnia atkinsoni TaxID=342845... [more]
UPI001885990D2.270e-6871.83RNA-binding protein pno1-like isoform X2 n=2 Tax=P... [more]
UPI001F4F6E1B3.220e-6874.83RNA-binding protein pno1 n=2 Tax=Schistocerca TaxI... [more]
C1BPH4_CALRO4.860e-6872.66RNA-binding protein pno1 n=2 Tax=Caligus rogercres... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 49..129
e-value: 8.3E-6
score: 27.6
IPR039912Pre-rRNA-processing protein PNO1-likePANTHERPTHR12826:SF13RNA-BINDING PROTEIN PNO1coord: 18..164
NoneNo IPR availablePANTHERPTHR12826FAMILY NOT NAMEDcoord: 18..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig95825contigEcto-sp8_S_contig95825:3..494 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig95825.31225.1mRNA_Ecto-sp8_S_contig95825.31225.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig95825 3..515 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig95825.31225.1 ID=prot_Ecto-sp8_S_contig95825.31225.1|Name=mRNA_Ecto-sp8_S_contig95825.31225.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=164bp
MVDQTEKEDSNMDTESIESGVLSGVEGTLPKAKAAFPPIKREKLADGSEV
RKIPVPSHRYTPLKENWMKIFEPIVEHLKMQVRFNLKTRNVEVRTCKDTE
DVTNLQKAADFVRAFIFGFEVEDALALVRLDDLFIDSFEIQDVKTLKGDH
LARAIGRVAGKGGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036612KH_dom_type_1_sf
IPR039912PNO1-like