prot_Ecto-sp8_S_contig9577.31213.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9577.31213.1
Unique Nameprot_Ecto-sp8_S_contig9577.31213.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length110
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9577.31213.1 vs. uniprot
Match: D8LM82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM82_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 1.140e-23
Identity = 52/55 (94.55%), Postives = 52/55 (94.55%), Query Frame = 0 
Query:   55 EPPPSKGRQKKHAPSKVPVSPGVAFVPYRSPTSRANPRGSSLRGSGAIAGRKTRF 109
            E PP KGRQKKHAPSKVPVSPGVAFVPYRSPTSR NPRGSSLRGSGAIAGRKTRF
Sbjct:  315 EAPPCKGRQKKHAPSKVPVSPGVAFVPYRSPTSRTNPRGSSLRGSGAIAGRKTRF 369
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BLAST of mRNA_Ecto-sp8_S_contig9577.31213.1 vs. uniprot
Match: D7FK84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK84_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 3.150e-23
Identity = 63/109 (57.80%), Postives = 71/109 (65.14%), Query Frame = 0 
Query:    1 HTFTGSENITVRPSSFSRWGQSESGTKEATXXXXXXXXXXXXXXXXXXXXPSRQEPPPSKGRQKKHAPSKVPVSPGVAFVPYRSPTSRANPRGSSLRGSGAIAGRKTRF 109
            H F+GSENITVR SS SRW  ++   KEA+                     S +E   S GRQ+KHAP+KV VSPGV FVPYRSPT RANPRG+SLRGSGAIAGRKT F
Sbjct:  326 HAFSGSENITVRQSSLSRW--TKIANKEASTLVSTSTSVTIRS--------SSREGVVSLGRQRKHAPAKVSVSPGVMFVPYRSPTRRANPRGTSLRGSGAIAGRKTSF 424
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9577.31213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM82_ECTSI1.140e-2394.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FK84_ECTSI3.150e-2357.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9577contigEcto-sp8_S_contig9577:43..372 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9577.31213.1mRNA_Ecto-sp8_S_contig9577.31213.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9577 43..395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9577.31213.1 ID=prot_Ecto-sp8_S_contig9577.31213.1|Name=mRNA_Ecto-sp8_S_contig9577.31213.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=110bp
HTFTGSENITVRPSSFSRWGQSESGTKEATTTTTTPVSTPPSASTPRSPS
PSRQEPPPSKGRQKKHAPSKVPVSPGVAFVPYRSPTSRANPRGSSLRGSG
AIAGRKTRF*
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