prot_Ecto-sp8_S_contig95738.31208.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig95738.31208.1
Unique Nameprot_Ecto-sp8_S_contig95738.31208.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length47
Homology
BLAST of mRNA_Ecto-sp8_S_contig95738.31208.1 vs. uniprot
Match: D8LDJ5_ECTSI (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDJ5_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 2.660e-25
Identity = 46/47 (97.87%), Postives = 46/47 (97.87%), Query Frame = 0
Query:    1 PARITTFALEAYLHQLREDGYSVFVVRGDDLPPPATEPREGSRDCWY 47
            P RITTFALEAYLHQLREDGYSVFVVRGDDLPPPATEPREGSRDCWY
Sbjct:  133 PTRITTFALEAYLHQLREDGYSVFVVRGDDLPPPATEPREGSRDCWY 179          
BLAST of mRNA_Ecto-sp8_S_contig95738.31208.1 vs. uniprot
Match: A0A836CJ83_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ83_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.070e-9
Identity = 31/51 (60.78%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    1 PARITTFALEAYLHQLREDGYSVFVVRGDDLPPPATEPREGS----RDCWY 47
            P  IT++ALEA LHQ R DGYSVFVVRG  LPPP+TE   GS     + WY
Sbjct:  143 PEWITSYALEATLHQYRLDGYSVFVVRGGTLPPPSTEGPYGSDAGNAEDWY 193          
BLAST of mRNA_Ecto-sp8_S_contig95738.31208.1 vs. uniprot
Match: A0A2R5GVD8_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVD8_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 5.790e-5
Identity = 26/48 (54.17%), Postives = 31/48 (64.58%), Query Frame = 0
Query:    1 PARITTFALEAYLHQLREDGYSVFVVRGDDLPPPATEPRE-GSRDCWY 47
            PA I+ F L AYL QLRE+GYS+FVV G  LPP  T+    G R  W+
Sbjct:  143 PACISLFYLSAYLGQLREEGYSIFVVEGT-LPPLFTDMNAMGKRSDWF 189          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig95738.31208.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDJ5_ECTSI2.660e-2597.87Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CJ83_9STRA1.070e-960.78Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus Ta... [more]
A0A2R5GVD8_9STRA5.790e-554.17Ubiquitinyl hydrolase 1 n=1 Tax=Hondaea fermentalg... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.40coord: 1..40
e-value: 1.5E-6
score: 29.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig95738contigEcto-sp8_S_contig95738:443..583 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig95738.31208.1mRNA_Ecto-sp8_S_contig95738.31208.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig95738 443..583 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig95738.31208.1 ID=prot_Ecto-sp8_S_contig95738.31208.1|Name=mRNA_Ecto-sp8_S_contig95738.31208.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=47bp
PARITTFALEAYLHQLREDGYSVFVVRGDDLPPPATEPREGSRDCWY
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