prot_Ecto-sp8_S_contig95716.31201.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig95716.31201.1
Unique Nameprot_Ecto-sp8_S_contig95716.31201.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length42
Homology
BLAST of mRNA_Ecto-sp8_S_contig95716.31201.1 vs. uniprot
Match: D7FP82_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP82_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 6.120e-21
Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 0
Query:    1 MCVDCFCVYVESRVSERMLVTSRDFGGYTVGCPMGCADSFID 42
            MCVDCFCVYVESRVSERMLVTSRDF GYTVGCPMGCADSFID
Sbjct:  256 MCVDCFCVYVESRVSERMLVTSRDFDGYTVGCPMGCADSFID 297          
BLAST of mRNA_Ecto-sp8_S_contig95716.31201.1 vs. uniprot
Match: A0A811UYS1_CERCA ((Mediterranean fruit fly) hypothetical protein n=1 Tax=Ceratitis capitata TaxID=7213 RepID=A0A811UYS1_CERCA)

HSP 1 Score: 50.4 bits (119), Expect = 4.900e-6
Identity = 22/41 (53.66%), Postives = 27/41 (65.85%), Query Frame = 0
Query:    2 CVDCFCVYVESRVSERMLVTSRDFGGYTVGCPMGCADSFID 42
            C+DCF  Y  SR+SER  +   D G YT+ CP GC DSFI+
Sbjct:  181 CIDCFEQYCRSRLSERQFMPHPDIG-YTLPCPAGCTDSFIE 220          
BLAST of mRNA_Ecto-sp8_S_contig95716.31201.1 vs. uniprot
Match: W8BV40_CERCA (RBR-type E3 ubiquitin transferase (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BV40_CERCA)

HSP 1 Score: 50.4 bits (119), Expect = 5.220e-6
Identity = 22/41 (53.66%), Postives = 27/41 (65.85%), Query Frame = 0
Query:    2 CVDCFCVYVESRVSERMLVTSRDFGGYTVGCPMGCADSFID 42
            C+DCF  Y  SR+SER  +   D G YT+ CP GC DSFI+
Sbjct:  297 CIDCFEQYCRSRLSERQFMPHPDIG-YTLPCPAGCTDSFIE 336          
BLAST of mRNA_Ecto-sp8_S_contig95716.31201.1 vs. uniprot
Match: UPI0008112FCC (E3 ubiquitin-protein ligase parkin n=1 Tax=Rhagoletis zephyria TaxID=28612 RepID=UPI0008112FCC)

HSP 1 Score: 50.1 bits (118), Expect = 7.140e-6
Identity = 22/41 (53.66%), Postives = 28/41 (68.29%), Query Frame = 0
Query:    2 CVDCFCVYVESRVSERMLVTSRDFGGYTVGCPMGCADSFID 42
            C+DCF  Y  SR+SER  +   DFG YT+ CP GC +SFI+
Sbjct:  295 CLDCFQQYCRSRLSERQFMPHPDFG-YTLPCPAGCENSFIE 334          
BLAST of mRNA_Ecto-sp8_S_contig95716.31201.1 vs. uniprot
Match: A0A1B0GN34_PHLPP (E3 ubiquitin-protein ligase parkin n=1 Tax=Phlebotomus papatasi TaxID=29031 RepID=A0A1B0GN34_PHLPP)

HSP 1 Score: 49.7 bits (117), Expect = 9.770e-6
Identity = 19/41 (46.34%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    2 CVDCFCVYVESRVSERMLVTSRDFGGYTVGCPMGCADSFID 42
            C+DCF  + +SR+SER  +++ + G YT+ CP+GC +SFI+
Sbjct:  282 CLDCFRDFCQSRLSERQFISTENLG-YTLSCPVGCTNSFIE 321          
BLAST of mRNA_Ecto-sp8_S_contig95716.31201.1 vs. uniprot
Match: T1H7C6_MEGSC (E3 ubiquitin-protein ligase parkin n=1 Tax=Megaselia scalaris TaxID=36166 RepID=T1H7C6_MEGSC)

HSP 1 Score: 49.7 bits (117), Expect = 9.770e-6
Identity = 22/41 (53.66%), Postives = 26/41 (63.41%), Query Frame = 0
Query:    2 CVDCFCVYVESRVSERMLVTSRDFGGYTVGCPMGCADSFID 42
            C+DCF  Y  SR+ ER  +   D G YT+ CP GC DSFID
Sbjct:  257 CLDCFLQYCRSRLLERQFMPHPDIG-YTLQCPTGCPDSFID 296          
BLAST of mRNA_Ecto-sp8_S_contig95716.31201.1 vs. uniprot
Match: A0A1B0CUG4_LUTLO (E3 ubiquitin-protein ligase parkin n=1 Tax=Lutzomyia longipalpis TaxID=7200 RepID=A0A1B0CUG4_LUTLO)

HSP 1 Score: 49.3 bits (116), Expect = 1.340e-5
Identity = 19/41 (46.34%), Postives = 30/41 (73.17%), Query Frame = 0
Query:    2 CVDCFCVYVESRVSERMLVTSRDFGGYTVGCPMGCADSFID 42
            C+DCF  + +SR+ ER  +++   G YT+ CP+GCA+SFI+
Sbjct:  279 CLDCFRDFCQSRLGERQFISTEHLG-YTLSCPVGCAESFIE 318          
BLAST of mRNA_Ecto-sp8_S_contig95716.31201.1 vs. uniprot
Match: A0A1L8DSJ9_9DIPT (E3 ubiquitin-protein ligase parkin n=2 Tax=Nyssomyia neivai TaxID=330878 RepID=A0A1L8DSJ9_9DIPT)

HSP 1 Score: 49.3 bits (116), Expect = 1.340e-5
Identity = 19/41 (46.34%), Postives = 30/41 (73.17%), Query Frame = 0
Query:    2 CVDCFCVYVESRVSERMLVTSRDFGGYTVGCPMGCADSFID 42
            C+DCF  + +SR+ ER  +++   G YT+ CP+GCA+SFI+
Sbjct:  273 CLDCFRDFCQSRLGERQFISTETLG-YTLSCPVGCAESFIE 312          
BLAST of mRNA_Ecto-sp8_S_contig95716.31201.1 vs. uniprot
Match: A0A182QJI6_9DIPT (E3 ubiquitin-protein ligase parkin n=1 Tax=Anopheles farauti TaxID=69004 RepID=A0A182QJI6_9DIPT)

HSP 1 Score: 48.9 bits (115), Expect = 1.830e-5
Identity = 22/41 (53.66%), Postives = 27/41 (65.85%), Query Frame = 0
Query:    2 CVDCFCVYVESRVSERMLVTSRDFGGYTVGCPMGCADSFID 42
            C+DCF  Y  +R+ ER  V     GGYT+ CP GCADSFI+
Sbjct:  286 CLDCFRQYCVTRLLERQFV-EHPAGGYTLQCPAGCADSFIE 325          
BLAST of mRNA_Ecto-sp8_S_contig95716.31201.1 vs. uniprot
Match: UPI0002659AEE (E3 ubiquitin-protein ligase parkin n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002659AEE)

HSP 1 Score: 48.9 bits (115), Expect = 1.830e-5
Identity = 21/41 (51.22%), Postives = 29/41 (70.73%), Query Frame = 0
Query:    1 MCVDCFCVYVESRVSERMLVTSRDFGGYTVGCPMGCADSFI 41
            +C++CF  Y  SR++ER  V + D  GYT+ CP+ CADSFI
Sbjct:  266 ICLECFLAYCLSRLNERKFVQT-DLFGYTLACPVNCADSFI 305          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig95716.31201.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FP82_ECTSI6.120e-2197.62RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A811UYS1_CERCA4.900e-653.66(Mediterranean fruit fly) hypothetical protein n=1... [more]
W8BV40_CERCA5.220e-653.66RBR-type E3 ubiquitin transferase (Fragment) n=1 T... [more]
UPI0008112FCC7.140e-653.66E3 ubiquitin-protein ligase parkin n=1 Tax=Rhagole... [more]
A0A1B0GN34_PHLPP9.770e-646.34E3 ubiquitin-protein ligase parkin n=1 Tax=Phlebot... [more]
T1H7C6_MEGSC9.770e-653.66E3 ubiquitin-protein ligase parkin n=1 Tax=Megasel... [more]
A0A1B0CUG4_LUTLO1.340e-546.34E3 ubiquitin-protein ligase parkin n=1 Tax=Lutzomy... [more]
A0A1L8DSJ9_9DIPT1.340e-546.34E3 ubiquitin-protein ligase parkin n=2 Tax=Nyssomy... [more]
A0A182QJI6_9DIPT1.830e-553.66E3 ubiquitin-protein ligase parkin n=1 Tax=Anophel... [more]
UPI0002659AEE1.830e-551.22E3 ubiquitin-protein ligase parkin n=1 Tax=Galendr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041170RING/Ubox-like zinc-binding domainPFAMPF17978zf-RING_14coord: 1..42
e-value: 1.4E-10
score: 41.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig95716contigEcto-sp8_S_contig95716:447..572 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig95716.31201.1mRNA_Ecto-sp8_S_contig95716.31201.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig95716 441..572 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig95716.31201.1 ID=prot_Ecto-sp8_S_contig95716.31201.1|Name=mRNA_Ecto-sp8_S_contig95716.31201.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=42bp
MCVDCFCVYVESRVSERMLVTSRDFGGYTVGCPMGCADSFID
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041170Znf-RING_14