prot_Ecto-sp8_S_contig95710.31198.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig95710.31198.1
Unique Nameprot_Ecto-sp8_S_contig95710.31198.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length193
Homology
BLAST of mRNA_Ecto-sp8_S_contig95710.31198.1 vs. uniprot
Match: A0A127MHU7_9SPHN (Hydroxyacid dehydrogenase n=1 Tax=Sphingorhabdus sp. M41 TaxID=1806885 RepID=A0A127MHU7_9SPHN)

HSP 1 Score: 325 bits (834), Expect = 1.260e-107
Identity = 162/193 (83.94%), Postives = 178/193 (92.23%), Query Frame = 0
Query:    1 QRFPLTLGGKGSATVGGLVSTNAGGTQVLRHGTMRSLVAGIEAVLPDGTIFDGLSALKKDNRGYDLKQLFIGGEGTLGVVTAATLKTVPALVDRCVAWAAVNSSHAAYRLFQHLNRRTPQSLEGFEIIPASCLNSVLDHIPGTRPPLAGTHAWHILIEIVRDQPDAQDPAAFTENLLADAMDRNLIEDAVLAT 193
            QRFPLTLGGKGSATVGGL+STNAGGTQVLRHGTMRSLVAGIEAVLPDG+I+DGL+ALKKDNRGYDLKQLF+GGEGTLGVVTAATLKTVPALVDRCVAWAAV+S+ AAY+LF+ LN+RT QSLEGFEI+P SCL SVL HIP TR PL G H WH+LIEIVRDQPDAQDP A TE LLA+A++R+LIEDA LAT
Sbjct:  130 QRFPLTLGGKGSATVGGLISTNAGGTQVLRHGTMRSLVAGIEAVLPDGSIYDGLAALKKDNRGYDLKQLFVGGEGTLGVVTAATLKTVPALVDRCVAWAAVDSTDAAYQLFRFLNKRTSQSLEGFEIVPDSCLKSVLRHIPDTRSPLEGAHHWHVLIEIVRDQPDAQDPGAVTETLLAEALERDLIEDATLAT 322          
BLAST of mRNA_Ecto-sp8_S_contig95710.31198.1 vs. uniprot
Match: A0A220W9N3_9SPHN (Putative FAD-linked oxidoreductase n=1 Tax=Sphingorhabdus sp. SMR4y TaxID=2584094 RepID=A0A220W9N3_9SPHN)

HSP 1 Score: 325 bits (834), Expect = 1.260e-107
Identity = 159/192 (82.81%), Postives = 181/192 (94.27%), Query Frame = 0
Query:    1 QRFPLTLGGKGSATVGGLVSTNAGGTQVLRHGTMRSLVAGIEAVLPDGTIFDGLSALKKDNRGYDLKQLFIGGEGTLGVVTAATLKTVPALVDRCVAWAAVNSSHAAYRLFQHLNRRTPQSLEGFEIIPASCLNSVLDHIPGTRPPLAGTHAWHILIEIVRDQPDAQDPAAFTENLLADAMDRNLIEDAVLA 192
            QRFPLTLGGKGSATVGGL+STNAGGTQVLRHGTMRSLV+GIEAVLPDG+IFDGL+ALKKDNRGYDLK LFIGGEG+LGVVTAATLKTVPALVDRCV+WAAV+S+ AAY++F+ LN+RTPQSLEGFEIIP SCL+SVL HIPGTR PL G+H WH+LIEIVRDQPDAQDP + TE+LLA+AM++NL+EDA +A
Sbjct:  130 QRFPLTLGGKGSATVGGLISTNAGGTQVLRHGTMRSLVSGIEAVLPDGSIFDGLAALKKDNRGYDLKHLFIGGEGSLGVVTAATLKTVPALVDRCVSWAAVDSTDAAYQMFRFLNKRTPQSLEGFEIIPESCLDSVLRHIPGTRSPLQGSHRWHVLIEIVRDQPDAQDPRSVTEHLLAEAMEQNLVEDATIA 321          
BLAST of mRNA_Ecto-sp8_S_contig95710.31198.1 vs. uniprot
Match: A0A2G2CM69_9SPHN (Hydroxyacid dehydrogenase n=2 Tax=Sphingomonadales TaxID=204457 RepID=A0A2G2CM69_9SPHN)

HSP 1 Score: 321 bits (823), Expect = 5.790e-106
Identity = 159/192 (82.81%), Postives = 175/192 (91.15%), Query Frame = 0
Query:    1 QRFPLTLGGKGSATVGGLVSTNAGGTQVLRHGTMRSLVAGIEAVLPDGTIFDGLSALKKDNRGYDLKQLFIGGEGTLGVVTAATLKTVPALVDRCVAWAAVNSSHAAYRLFQHLNRRTPQSLEGFEIIPASCLNSVLDHIPGTRPPLAGTHAWHILIEIVRDQPDAQDPAAFTENLLADAMDRNLIEDAVLA 192
            QRFPLTLGGKGSATVGGLVSTNAGGTQVLRHGTMRSLVAGIEAVLPDG+I DGLSALKKDNRGYDLKQLF+GGEGTLG+VTAATLKTVPALVDRCVAWAAV+ + AAY LF+ LN RTP +LEGFEIIPA+CL+SVL HIPGTR PL GT+ WH+LIEI+RDQPDA+DP    ENLLA A+++NLIEDA LA
Sbjct:  130 QRFPLTLGGKGSATVGGLVSTNAGGTQVLRHGTMRSLVAGIEAVLPDGSILDGLSALKKDNRGYDLKQLFVGGEGTLGIVTAATLKTVPALVDRCVAWAAVDGTEAAYELFRFLNSRTPHALEGFEIIPATCLDSVLRHIPGTRSPLEGTYPWHVLIEIIRDQPDAEDPRTVAENLLAKAIEQNLIEDATLA 321          
BLAST of mRNA_Ecto-sp8_S_contig95710.31198.1 vs. uniprot
Match: A0A2D3RCZ7_9SPHN (Hydroxyacid dehydrogenase n=1 Tax=Sphingorhabdus sp. YGSMI21 TaxID=2077182 RepID=A0A2D3RCZ7_9SPHN)

HSP 1 Score: 321 bits (823), Expect = 5.790e-106
Identity = 159/192 (82.81%), Postives = 177/192 (92.19%), Query Frame = 0
Query:    1 QRFPLTLGGKGSATVGGLVSTNAGGTQVLRHGTMRSLVAGIEAVLPDGTIFDGLSALKKDNRGYDLKQLFIGGEGTLGVVTAATLKTVPALVDRCVAWAAVNSSHAAYRLFQHLNRRTPQSLEGFEIIPASCLNSVLDHIPGTRPPLAGTHAWHILIEIVRDQPDAQDPAAFTENLLADAMDRNLIEDAVLA 192
            QRFPLTLGGKGSATVGGLVSTNAGGTQVLRHGTMRSLV GIEAVLPDG+IFDGL+ALKKDNRGYDLKQLF+GGEGTLG+VTAATLKTVPALVDRCV+WAAV+S+ AAY LF+ LN+RT QSLEGFEIIP +CL SVL HIPGTR PL G+H WH+LIEIVRDQPDA+DP + TE+LLA+AM+ +LIEDA LA
Sbjct:  130 QRFPLTLGGKGSATVGGLVSTNAGGTQVLRHGTMRSLVTGIEAVLPDGSIFDGLAALKKDNRGYDLKQLFVGGEGTLGIVTAATLKTVPALVDRCVSWAAVDSTDAAYELFRFLNKRTAQSLEGFEIIPETCLESVLRHIPGTRAPLKGSHRWHVLIEIVRDQPDAKDPGSITESLLAEAMELDLIEDATLA 321          
BLAST of mRNA_Ecto-sp8_S_contig95710.31198.1 vs. uniprot
Match: A0A653JSW8_9SPHN (Putative FAD-linked oxidoreductase n=1 Tax=Sphingorhabdus sp. 109 TaxID=2653173 RepID=A0A653JSW8_9SPHN)

HSP 1 Score: 318 bits (816), Expect = 6.610e-105
Identity = 157/192 (81.77%), Postives = 176/192 (91.67%), Query Frame = 0
Query:    1 QRFPLTLGGKGSATVGGLVSTNAGGTQVLRHGTMRSLVAGIEAVLPDGTIFDGLSALKKDNRGYDLKQLFIGGEGTLGVVTAATLKTVPALVDRCVAWAAVNSSHAAYRLFQHLNRRTPQSLEGFEIIPASCLNSVLDHIPGTRPPLAGTHAWHILIEIVRDQPDAQDPAAFTENLLADAMDRNLIEDAVLA 192
            QRFPLTLGGKGSATVGGL+STNAGGTQVLRHGTMR+LV+GIEAVLPDG+IFDGLSALKKDNRGYDLK LFIGGEGTLG+VTAATLKTVPALVDRCV+WAAV+S+ AAY++F+ LN+RTPQSLEGFEIIP +CL SVL HIPGTR PL   H WHILIEIVRDQPDAQDP + TE LLA+A++R L+EDA +A
Sbjct:  130 QRFPLTLGGKGSATVGGLISTNAGGTQVLRHGTMRALVSGIEAVLPDGSIFDGLSALKKDNRGYDLKHLFIGGEGTLGIVTAATLKTVPALVDRCVSWAAVDSTGAAYQMFRFLNQRTPQSLEGFEIIPETCLQSVLRHIPGTRAPLQEEHRWHILIEIVRDQPDAQDPRSVTEKLLAEALERGLVEDATIA 321          
BLAST of mRNA_Ecto-sp8_S_contig95710.31198.1 vs. uniprot
Match: UPI001593F180 (FAD-binding oxidoreductase n=1 Tax=Parasphingorhabdus flavimaris TaxID=266812 RepID=UPI001593F180)

HSP 1 Score: 315 bits (808), Expect = 1.070e-103
Identity = 157/192 (81.77%), Postives = 173/192 (90.10%), Query Frame = 0
Query:    1 QRFPLTLGGKGSATVGGLVSTNAGGTQVLRHGTMRSLVAGIEAVLPDGTIFDGLSALKKDNRGYDLKQLFIGGEGTLGVVTAATLKTVPALVDRCVAWAAVNSSHAAYRLFQHLNRRTPQSLEGFEIIPASCLNSVLDHIPGTRPPLAGTHAWHILIEIVRDQPDAQDPAAFTENLLADAMDRNLIEDAVLA 192
            QRFPLTLGGKGSATVGGL+STNAGGTQVLRHGTMR+LVAGIEAVLPDGTI +GL+ALKKDNRGYDLKQL IGGEGTLGVVTAATL+TVPAL+DRCVAW AV+S+ AAYRLFQ LNRRTPQSLEGFEIIP +CL+SVL HIPGTRPPL G H W+IL+E+VRDQ DAQDP    E LLA+A++  LIEDA LA
Sbjct:  130 QRFPLTLGGKGSATVGGLISTNAGGTQVLRHGTMRALVAGIEAVLPDGTILEGLAALKKDNRGYDLKQLLIGGEGTLGVVTAATLRTVPALIDRCVAWIAVDSTDAAYRLFQFLNRRTPQSLEGFEIIPETCLDSVLRHIPGTRPPLTGAHRWNILVELVRDQADAQDPRTVAEALLAEALELGLIEDATLA 321          
BLAST of mRNA_Ecto-sp8_S_contig95710.31198.1 vs. uniprot
Match: UPI001E38E177 (FAD-binding oxidoreductase n=1 Tax=Parasphingorhabdus litoris TaxID=394733 RepID=UPI001E38E177)

HSP 1 Score: 295 bits (755), Expect = 1.180e-95
Identity = 147/192 (76.56%), Postives = 169/192 (88.02%), Query Frame = 0
Query:    1 QRFPLTLGGKGSATVGGLVSTNAGGTQVLRHGTMRSLVAGIEAVLPDGTIFDGLSALKKDNRGYDLKQLFIGGEGTLGVVTAATLKTVPALVDRCVAWAAVNSSHAAYRLFQHLNRRTPQSLEGFEIIPASCLNSVLDHIPGTRPPLAGTHAWHILIEIVRDQPDAQDPAAFTENLLADAMDRNLIEDAVLA 192
            QRFPLTLGGKGSAT+GGLVSTNAGGTQVLRHGTMR+LVAG+EAVLPDG+I++GL+ LKKDNRGYDLKQL +GGEGTLG+VTAATLKTVPAL+DR VAWA V+S  AAYRLFQ LN R  QSLEGFEIIP SCL++VL HIP TR PL  + AW++LIE+VRDQPDA DP    ENLLA+A+D+ L+EDAV+A
Sbjct:  130 QRFPLTLGGKGSATIGGLVSTNAGGTQVLRHGTMRALVAGLEAVLPDGSIYNGLAPLKKDNRGYDLKQLLVGGEGTLGIVTAATLKTVPALIDRSVAWAGVSSPQAAYRLFQFLNTRGSQSLEGFEIIPKSCLDAVLTHIPDTRSPLEQSAAWNVLIEVVRDQPDAIDPRISIENLLAEAIDKELLEDAVIA 321          
BLAST of mRNA_Ecto-sp8_S_contig95710.31198.1 vs. uniprot
Match: UPI001AA015CA (FAD-binding oxidoreductase n=1 Tax=Parasphingorhabdus sp. JHSY0214 TaxID=2806553 RepID=UPI001AA015CA)

HSP 1 Score: 292 bits (748), Expect = 1.230e-94
Identity = 145/192 (75.52%), Postives = 165/192 (85.94%), Query Frame = 0
Query:    1 QRFPLTLGGKGSATVGGLVSTNAGGTQVLRHGTMRSLVAGIEAVLPDGTIFDGLSALKKDNRGYDLKQLFIGGEGTLGVVTAATLKTVPALVDRCVAWAAVNSSHAAYRLFQHLNRRTPQSLEGFEIIPASCLNSVLDHIPGTRPPLAGTHAWHILIEIVRDQPDAQDPAAFTENLLADAMDRNLIEDAVLA 192
            QRFPLTLGGKGSAT+GGLVSTNAGGTQVLRHGTMR+LVAG+EAVLPDG+I+DGL+ LKKDNRGYDLKQL +GGEGTLG+VTAATLKTVPAL+DRCVAWA V+S  AAY+LFQ LN R  QSLEGFEIIP SCL++VL HIP TR PL     W++LIEI+RDQ D+ DP   TE+LLA AMD+ LI DA +A
Sbjct:  130 QRFPLTLGGKGSATIGGLVSTNAGGTQVLRHGTMRALVAGLEAVLPDGSIYDGLAPLKKDNRGYDLKQLLVGGEGTLGIVTAATLKTVPALIDRCVAWAGVSSPQAAYKLFQFLNARESQSLEGFEIIPKSCLDAVLTHIPDTRAPLEPAAPWNVLIEIIRDQSDSIDPRELTESLLAKAMDKGLISDAAIA 321          
BLAST of mRNA_Ecto-sp8_S_contig95710.31198.1 vs. uniprot
Match: A0A6H2DM03_9SPHN (FAD-binding oxidoreductase n=1 Tax=Parasphingorhabdus halotolerans TaxID=2725558 RepID=A0A6H2DM03_9SPHN)

HSP 1 Score: 287 bits (735), Expect = 1.090e-92
Identity = 146/193 (75.65%), Postives = 160/193 (82.90%), Query Frame = 0
Query:    1 QRFPLTLGGKGSATVGGLVSTNAGGTQVLRHGTMRSLVAGIEAVLPDGTIFDGLSALKKDNRGYDLKQLFIGGEGTLGVVTAATLKTVPALVDRCVAWAAVNSSHAAYRLFQHLNRRTPQSLEGFEIIPASCLNSVLDHIPGTRPPLAGTHAWHILIEIVRDQPDAQDPAAFTENLLADAMDRNLIEDAVLAT 193
            QRFPLTLGGKGSAT+GGLVSTNAGGTQVLRHGTMRSLVAGIEAVLPDG+I + L+ALKKDNRGYDLKQL IGGEGTLG+VTAATLKTVPALVDRCV W  V +  AAY LFQ LN R  QSLEGFEIIPA+CL+SVL+HIPGTR PLA   AW++LIEI RDQ DA DP    E LL  A + NL +DA  A+
Sbjct:  130 QRFPLTLGGKGSATIGGLVSTNAGGTQVLRHGTMRSLVAGIEAVLPDGSILNSLAALKKDNRGYDLKQLLIGGEGTLGIVTAATLKTVPALVDRCVTWVGVKTPQAAYALFQFLNARESQSLEGFEIIPATCLDSVLEHIPGTRAPLAQPSAWNVLIEITRDQHDATDPRITAETLLEKAFEENLAQDAAFAS 322          
BLAST of mRNA_Ecto-sp8_S_contig95710.31198.1 vs. uniprot
Match: UPI000D69AB6A (FAD-binding oxidoreductase n=1 Tax=Sphingorhabdus sp. EL138 TaxID=2073156 RepID=UPI000D69AB6A)

HSP 1 Score: 285 bits (728), Expect = 1.380e-91
Identity = 141/193 (73.06%), Postives = 165/193 (85.49%), Query Frame = 0
Query:    1 QRFPLTLGGKGSATVGGLVSTNAGGTQVLRHGTMRSLVAGIEAVLPDGTIFDGLSALKKDNRGYDLKQLFIGGEGTLGVVTAATLKTVPALVDRCVAWAAVNSSHAAYRLFQHLNRRTPQSLEGFEIIPASCLNSVLDHIPGTRPPLAGTHAWHILIEIVRDQPDAQDPAAFTENLLADAMDRNLIEDAVLAT 193
            QRFPLTLGGKGSAT+GGLVSTNAGGTQVLRHG MRSLVAG+EAVLPDG+I++GLS LKKDNRGYDLKQL IGGEGTLG+VTAATLKTVPAL+DRCVAWA V S  AAY LF+ LN R  QSLEGFEI+P +CL++VL+HIP TRPPL  + +W++LIE VRDQ  A DP    E LLA+A+++ LI+DA +A+
Sbjct:  130 QRFPLTLGGKGSATIGGLVSTNAGGTQVLRHGAMRSLVAGLEAVLPDGSIYNGLSPLKKDNRGYDLKQLLIGGEGTLGIVTAATLKTVPALIDRCVAWAGVASPQAAYALFKFLNAREGQSLEGFEIVPKTCLDAVLEHIPDTRPPLNDSASWNVLIEFVRDQELATDPRELVEKLLAEALEQGLIQDAAIAS 322          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig95710.31198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A127MHU7_9SPHN1.260e-10783.94Hydroxyacid dehydrogenase n=1 Tax=Sphingorhabdus s... [more]
A0A220W9N3_9SPHN1.260e-10782.81Putative FAD-linked oxidoreductase n=1 Tax=Sphingo... [more]
A0A2G2CM69_9SPHN5.790e-10682.81Hydroxyacid dehydrogenase n=2 Tax=Sphingomonadales... [more]
A0A2D3RCZ7_9SPHN5.790e-10682.81Hydroxyacid dehydrogenase n=1 Tax=Sphingorhabdus s... [more]
A0A653JSW8_9SPHN6.610e-10581.77Putative FAD-linked oxidoreductase n=1 Tax=Sphingo... [more]
UPI001593F1801.070e-10381.77FAD-binding oxidoreductase n=1 Tax=Parasphingorhab... [more]
UPI001E38E1771.180e-9576.56FAD-binding oxidoreductase n=1 Tax=Parasphingorhab... [more]
UPI001AA015CA1.230e-9475.52FAD-binding oxidoreductase n=1 Tax=Parasphingorhab... [more]
A0A6H2DM03_9SPHN1.090e-9275.65FAD-binding oxidoreductase n=1 Tax=Parasphingorhab... [more]
UPI000D69AB6A1.380e-9173.06FAD-binding oxidoreductase n=1 Tax=Sphingorhabdus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.2190coord: 92..193
e-value: 1.7E-21
score: 78.8
NoneNo IPR availablePANTHERPTHR43716:SF1D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIALcoord: 3..193
NoneNo IPR availablePANTHERPTHR43716FAMILY NOT NAMEDcoord: 3..193
IPR016169FAD-binding, type PCMH, subdomain 2GENE3D3.30.465.10coord: 1..90
e-value: 5.6E-31
score: 109.0
IPR006094FAD linked oxidase, N-terminalPFAMPF01565FAD_binding_4coord: 3..51
e-value: 3.7E-9
score: 36.4
IPR016166FAD-binding domain, PCMH-typePROSITEPS51387FAD_PCMHcoord: 1..90
score: 12.934
IPR036318FAD-binding, type PCMH-like superfamilySUPERFAMILY56176FAD-binding/transporter-associated domain-likecoord: 3..89
IPR016164FAD-linked oxidase-like, C-terminalSUPERFAMILY55103FAD-linked oxidases, C-terminal domaincoord: 64..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig95710contigEcto-sp8_S_contig95710:2..580 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig95710.31198.1mRNA_Ecto-sp8_S_contig95710.31198.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig95710 2..580 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig95710.31198.1 ID=prot_Ecto-sp8_S_contig95710.31198.1|Name=mRNA_Ecto-sp8_S_contig95710.31198.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=193bp
QRFPLTLGGKGSATVGGLVSTNAGGTQVLRHGTMRSLVAGIEAVLPDGTI
FDGLSALKKDNRGYDLKQLFIGGEGTLGVVTAATLKTVPALVDRCVAWAA
VNSSHAAYRLFQHLNRRTPQSLEGFEIIPASCLNSVLDHIPGTRPPLAGT
HAWHILIEIVRDQPDAQDPAAFTENLLADAMDRNLIEDAVLAT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016169FAD-bd_PCMH_sub2
IPR006094Oxid_FAD_bind_N
IPR016166FAD-bd_PCMH
IPR036318FAD-bd_PCMH-like_sf
IPR016164FAD-linked_Oxase-like_C