prot_Ecto-sp8_S_contig956.31178.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig956.31178.1
Unique Nameprot_Ecto-sp8_S_contig956.31178.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length234
Homology
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BLAST of mRNA_Ecto-sp8_S_contig956.31178.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 1.860e-20
Identity = 52/77 (67.53%), Postives = 61/77 (79.22%), Query Frame = 0 
Query:    1 MASTDLDALVALFRSTGGARWCEKDDGDIAAELPTWSGVDLNDEGRVVQLFLNENDLRGVIPMKLGVLALLEILNLG 77
            MA TD DALVALFRSTGGA W +KD+ D AAE+ TWSGV +NDEGRVV+L L  N+LRG IP +LG L+ LE L+LG
Sbjct:    1 MALTDRDALVALFRSTGGASWDKKDNWDTAAEIATWSGVQVNDEGRVVKLRLKSNNLRGPIPPQLGNLSFLESLDLG 77
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BLAST of mRNA_Ecto-sp8_S_contig956.31178.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 1.510e-16
Identity = 42/72 (58.33%), Postives = 52/72 (72.22%), Query Frame = 0 
Query:    1 MASTDLDALVALFRSTGGARWCEKDDGDIAAELPTWSGVDLNDEGRVVQLFLNENDLRGVIPMKLGVLALLE 72
            MA TD DALVAL+R+TGG  W E  + D  A+L TW GVD+ND+GRVV+L L +N+L G IP  LG LA L+
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQ 72
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BLAST of mRNA_Ecto-sp8_S_contig956.31178.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 2.280e-16
Identity = 46/76 (60.53%), Postives = 57/76 (75.00%), Query Frame = 0 
Query:    1 MASTDLDALVALFRSTGGARWCEKDDGDIAAELPTWSGVDLNDEGRVVQLFLNENDLRGVIPMKLGVLALLEILNL 76
            MASTD DALVALFRS GGA W  K++ D AA+L +W GV LN++GRV +L L  N+L+GVIP K+G L  +EIL L
Sbjct:    1 MASTDRDALVALFRSAGGATWRRKENWDTAADLESWFGVILNNQGRVAELKLAVNNLQGVIPEKIGALNKIEILTL 76
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BLAST of mRNA_Ecto-sp8_S_contig956.31178.1 vs. uniprot
Match: A0A6H5L6T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6T0_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 4.600e-16
Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 0 
Query:    1 MASTDLDALVALFRSTGGARWCEKDDGDIAAELPTWSGVDLNDEGRVVQLFLNENDLRGVIPMKLGVLALLEIL 74
            M+STD +AL+ALFRSTGGA W  +D+ D  A L TW GV++ND+GRVV L L  N+L+G IP KLG L+ L  L
Sbjct:   19 MSSTDREALIALFRSTGGAGWWRRDNWDTDAVLATWDGVNVNDQGRVVGLSLIRNNLQGPIPSKLGNLSALTAL 92
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BLAST of mRNA_Ecto-sp8_S_contig956.31178.1 vs. uniprot
Match: A0A6H5KQP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQP2_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.030e-15
Identity = 42/74 (56.76%), Postives = 54/74 (72.97%), Query Frame = 0 
Query:    1 MASTDLDALVALFRSTGGARWCEKDDGDIAAELPTWSGVDLNDEGRVVQLFLNENDLRGVIPMKLGVLALLEIL 74
            M STD +ALV+LFRSTGGA W  +D+ D  A+L TW+GV++N +GRVV L L  N+L+G IP +LG LA L  L
Sbjct:    1 MVSTDREALVSLFRSTGGAGWIRRDNWDTDADLATWNGVNVNVQGRVVNLDLQYNNLQGSIPPELGKLAALRAL 74
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BLAST of mRNA_Ecto-sp8_S_contig956.31178.1 vs. uniprot
Match: D7FXI0_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI0_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 2.400e-15
Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 0 
Query:    1 MASTDLDALVALFRSTGGARWCEKDDGDIAAELPTWSGVDLNDEGRVVQLFLNENDLRGVIPMKLG 66
            M+STD +AL+ALFRSTGGA W  +D+ D  A L TW GV +ND+GRVV L L++N+L+G IP +LG
Sbjct:    1 MSSTDREALIALFRSTGGAGWMRRDNWDTDAVLGTWHGVKVNDQGRVVMLSLDQNNLQGHIPRQLG 66
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BLAST of mRNA_Ecto-sp8_S_contig956.31178.1 vs. uniprot
Match: D8LF65_ECTSI (Hypothetical leucine-rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF65_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 6.330e-15
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 0 
Query:    1 MASTDLDALVALFRSTGGARWCEKDDGDIAAELPTWSGVDLNDEGRVVQLFLNENDLRGVIPMKLGVL 68
            M++ D  AL+ALFRST GA W    + D  AEL TW+GV++NDEGRVVQL L +N+L G IP  LG L
Sbjct:    1 MSTMDRAALIALFRSTDGANWKTNSNWDTDAELATWAGVEVNDEGRVVQLILPDNNLHGPIPEALGTL 68
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BLAST of mRNA_Ecto-sp8_S_contig956.31178.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 8.380e-15
Identity = 42/76 (55.26%), Postives = 54/76 (71.05%), Query Frame = 0 
Query:    1 MASTDLDALVALFRSTGGARWCEKDDGDIAAELPTWSGVDLNDEGRVVQLFLNENDLRGVIPMKLGVLALLEILNL 76
            MA TD DALV L+R+TGG  W E+ + D  A+L TW GVD+ND+GRVV+L L +N+L G IP  LG L  L+ L+L
Sbjct:    1 MAQTDRDALVVLYRATGGENWRERQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGNLQQLHL 76
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BLAST of mRNA_Ecto-sp8_S_contig956.31178.1 vs. uniprot
Match: D7FPS8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS8_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 1.000e-13
Identity = 40/71 (56.34%), Postives = 52/71 (73.24%), Query Frame = 0 
Query:    1 MASTDLDALVALFRSTGGARWCEKDDGDIAAELPTWSGVDLNDEGRVVQLFLNENDLRGVIPMKLGVLALL 71
            MAS D DALVALF +TGG  W  K +   +A+L TW GV +N+EGRVV+L L++N+LRG IP++LG L  L
Sbjct:  187 MASPDRDALVALFHATGGDNWTRKSNWCTSAKLGTWKGVKVNEEGRVVELDLSDNNLRGTIPVELGKLGAL 257
[Close]
BLAST of mRNA_Ecto-sp8_S_contig956.31178.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.350e-13
Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 0 
Query:    1 MASTDLDALVALFRSTGGARWCEKDDGDIAAELPTWSGVDLNDEGRVVQLFLNENDLRGVIPMKLGVLALLEIL 74
            MASTD +ALVALFRSTGGA W ++ + D  A + TW GV++N +GRVV L L  N LRG IP +LG L+ L+ L
Sbjct:    1 MASTDREALVALFRSTGGAGWRQRGNWDTDAAIATWHGVEVNAQGRVVNLSLGGNSLRGHIPPELGALSELQEL 74
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig956.31178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCS7_ECTSI1.860e-2067.53LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JK91_9PHAE1.510e-1658.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUC9_ECTSI2.280e-1660.53LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5L6T0_9PHAE4.600e-1658.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQP2_9PHAE1.030e-1556.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXI0_ECTSI2.400e-1559.09Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D8LF65_ECTSI6.330e-1557.35Hypothetical leucine-rich repeat protein n=1 Tax=E... [more]
D8LBY3_ECTSI8.380e-1555.26Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FPS8_ECTSI1.000e-1356.34Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FX56_ECTSI1.350e-1356.76LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 92..116
e-value: 1.8
score: 17.6
coord: 140..164
e-value: 21.0
score: 10.6
coord: 188..212
e-value: 83.0
score: 5.7
coord: 68..91
e-value: 74.0
score: 6.1
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 49..105
e-value: 1.5E-8
score: 34.3
coord: 118..177
e-value: 5.6E-8
score: 32.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 16..158
e-value: 1.7E-42
score: 146.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 159..232
e-value: 2.7E-20
score: 74.5
NoneNo IPR availablePANTHERPTHR27000:SF567coord: 69..159
coord: 99..194
coord: 44..116
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 69..159
coord: 121..226
NoneNo IPR availablePANTHERPTHR27000:SF567coord: 121..226
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 44..116
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 99..194
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 38..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig956contigEcto-sp8_S_contig956:8099..11709 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig956.31178.1mRNA_Ecto-sp8_S_contig956.31178.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig956 7480..11722 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig956.31178.1 ID=prot_Ecto-sp8_S_contig956.31178.1|Name=mRNA_Ecto-sp8_S_contig956.31178.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=234bp
MASTDLDALVALFRSTGGARWCEKDDGDIAAELPTWSGVDLNDEGRVVQL
FLNENDLRGVIPMKLGVLALLEILNLGSNKLTGAIPASLGHLGSLQQLYL
SGNELTGHIPPELGDLINLQVLVLSANQLSGEIPASLGQLAKLETLSLDR
NNLSGHIPVELEALRELRKLMVEDNQLSGPISPKLGNLAALQHLVFSNNR
LSGPIPTELGSLSALQHLWLDGNQLSSEVLVDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf