prot_Ecto-sp8_S_contig95388.31151.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig95388.31151.1
Unique Nameprot_Ecto-sp8_S_contig95388.31151.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length162
Homology
BLAST of mRNA_Ecto-sp8_S_contig95388.31151.1 vs. uniprot
Match: A0A0U2THT2_9MAXI (60S ribosomal protein L21 n=3 Tax=Pseudodiaptomus poplesia TaxID=213370 RepID=A0A0U2THT2_9MAXI)

HSP 1 Score: 281 bits (718), Expect = 4.120e-95
Identity = 133/161 (82.61%), Postives = 148/161 (91.93%), Query Frame = 0
Query:    1 MGNPTGYRRGTRDMFARDYKKKGVEHLSTYLKTYKIGDIVDIKGCGAFQKGMPHKAYHGKTGRVFNVSKRAVGVVVNKRVRGNILPKRICVRIEHVKHSQCRKDFLDRVHANEIKKTEAKSTGTIGSACKRFPLAPKDAHLVTTKDNEPQVLGPIPFEFMA 161
            M NPTGYRRGTRDMF+R +KK+GVEHLSTYLKTYKIGDIVD KGCGAFQKGMPHKAYHGKTGRVFNVSK AVGVVVNKRV+G ILPKRI VRIEHVKHSQCRKDFLDRVH+NE+KK EAK+TG+ G  CKRFP  P++AH+V+TKDN PQVLGP+P+EF+A
Sbjct:    1 MTNPTGYRRGTRDMFSRAHKKRGVEHLSTYLKTYKIGDIVDAKGCGAFQKGMPHKAYHGKTGRVFNVSKHAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLDRVHSNEVKKKEAKATGS-GVICKRFPAQPREAHVVSTKDNVPQVLGPVPYEFIA 160          
BLAST of mRNA_Ecto-sp8_S_contig95388.31151.1 vs. uniprot
Match: A0A0U2TKX7_9MAXI (60S ribosomal protein L21 n=2 Tax=Calanoida TaxID=6833 RepID=A0A0U2TKX7_9MAXI)

HSP 1 Score: 279 bits (714), Expect = 1.680e-94
Identity = 132/161 (81.99%), Postives = 146/161 (90.68%), Query Frame = 0
Query:    1 MGNPTGYRRGTRDMFARDYKKKGVEHLSTYLKTYKIGDIVDIKGCGAFQKGMPHKAYHGKTGRVFNVSKRAVGVVVNKRVRGNILPKRICVRIEHVKHSQCRKDFLDRVHANEIKKTEAKSTGTIGSACKRFPLAPKDAHLVTTKDNEPQVLGPIPFEFMA 161
            M NPTGYRRGTRDMF+R +KKKGVEHLSTYLK YKIGDIVD+KGCGAFQKGMPHK+YHGKTGRVFNVSK+AVGVVVNKRV+G ILPKRI VRIEHVKHSQCRKDFLDRVHANE+KKTE K+TG     CKRFP  P+  H+V+TKDNEPQV+GPIP+EF+A
Sbjct:    1 MVNPTGYRRGTRDMFSRAHKKKGVEHLSTYLKNYKIGDIVDVKGCGAFQKGMPHKSYHGKTGRVFNVSKQAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLDRVHANEVKKTEQKTTGAT-VVCKRFPFEPRPGHVVSTKDNEPQVIGPIPYEFIA 160          
BLAST of mRNA_Ecto-sp8_S_contig95388.31151.1 vs. uniprot
Match: A0A0U2URZ0_ACAPC (60S ribosomal protein L21 n=3 Tax=Acartia pacifica TaxID=335913 RepID=A0A0U2URZ0_ACAPC)

HSP 1 Score: 270 bits (691), Expect = 5.380e-91
Identity = 125/161 (77.64%), Postives = 144/161 (89.44%), Query Frame = 0
Query:    1 MGNPTGYRRGTRDMFARDYKKKGVEHLSTYLKTYKIGDIVDIKGCGAFQKGMPHKAYHGKTGRVFNVSKRAVGVVVNKRVRGNILPKRICVRIEHVKHSQCRKDFLDRVHANEIKKTEAKSTGTIGSACKRFPLAPKDAHLVTTKDNEPQVLGPIPFEFMA 161
            M NP GYRRGTRDMF+R YKK GV+HLSTYLKTYK+GDIVD+KGCGAFQKGMPHK+YHGKTGRVFNVSKRAVGVVVNKRV+G ILPKRI VRIEHVKHSQCRKDFLDRVH+NE+KK EAK++G     CKR P+ P+  H+V+TKDN PQ++GP+P+EF+A
Sbjct:    1 MTNPKGYRRGTRDMFSRGYKKNGVQHLSTYLKTYKMGDIVDVKGCGAFQKGMPHKSYHGKTGRVFNVSKRAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLDRVHSNEVKKKEAKASGET-VICKRLPVGPRPGHVVSTKDNAPQIIGPVPYEFIA 160          
BLAST of mRNA_Ecto-sp8_S_contig95388.31151.1 vs. uniprot
Match: C1BTU6_LEPSM (60S ribosomal protein L21 n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=C1BTU6_LEPSM)

HSP 1 Score: 234 bits (596), Expect = 1.660e-76
Identity = 118/161 (73.29%), Postives = 126/161 (78.26%), Query Frame = 0
Query:    1 MGNPTGYRRGTRDMFARDYKKKGVEHLSTYLKTYKIGDIVDIKGCGAFQKGMPHKAYHGKTGRVFNVSKRAVGVVVNKRVRGNILPKRICVRIEHVKHSQCRKDFLDRVHANEIKKTEAKSTGTIGSACKRFPLAPKDAHLVTTKDNEPQVLGPIPFEFMA 161
            M NP GYRRGTRDMFARDYKKKGVEHLSTYL+ YK GDIVDIKG GAFQKGMPHK+YHGKTGRVFNVSK AVGVVVNKRV+G IL KRI VRIEHV HS+CR DFL RV ANE  KT AK  G      KR    P   H V+ +DNEPQ L PIP+EF+A
Sbjct:    1 MTNPKGYRRGTRDMFARDYKKKGVEHLSTYLRCYKNGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVSKHAVGVVVNKRVKGRILAKRISVRIEHVNHSKCRADFLRRVKANEALKTAAKQEGKPVPNTKREAKQPIPGHFVSARDNEPQFLAPIPYEFVA 161          
BLAST of mRNA_Ecto-sp8_S_contig95388.31151.1 vs. uniprot
Match: A0A7M5XGD2_9CNID (60S ribosomal protein L21 n=2 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XGD2_9CNID)

HSP 1 Score: 221 bits (563), Expect = 1.700e-71
Identity = 106/160 (66.25%), Postives = 129/160 (80.62%), Query Frame = 0
Query:    1 MGNPTGYRRGTRDMFARDYKKKGVEHLSTYLKTYKIGDIVDIKGCGAFQKGMPHKAYHGKTGRVFNVSKRAVGVVVNKRVRGNILPKRICVRIEHVKHSQCRKDFLDRVHANEIKKTEAKSTGTIGSACKRFPLAPKDAHLVTTKDNEPQVLGPIPFEFM 160
            M NP G RRGTR +F++ YKK GVEHLSTYLK YK+GDIVD+KG GAFQKGMP+K YHGKTGRVFNV++RAVGVVVNK++   I+PKRI VRIEHV+HS CR DFL+RV ANE+KK EA + G     C+R P+ P++ H VTTK NEP ++ PIP+EF+
Sbjct:    1 MTNPHGKRRGTRYLFSKGYKKNGVEHLSTYLKVYKVGDIVDVKGNGAFQKGMPYKFYHGKTGRVFNVTRRAVGVVVNKQLGNRIIPKRINVRIEHVRHSTCRDDFLNRVKANEVKKAEANAKGEKVD-CRRLPVQPREGHFVTTKRNEPTLVEPIPYEFI 159          
BLAST of mRNA_Ecto-sp8_S_contig95388.31151.1 vs. uniprot
Match: UPI000A2A8872 (60S ribosomal protein L21 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8872)

HSP 1 Score: 221 bits (562), Expect = 2.410e-71
Identity = 107/160 (66.88%), Postives = 128/160 (80.00%), Query Frame = 0
Query:    1 MGNPTGYRRGTRDMFARDYKKKGVEHLSTYLKTYKIGDIVDIKGCGAFQKGMPHKAYHGKTGRVFNVSKRAVGVVVNKRVRGNILPKRICVRIEHVKHSQCRKDFLDRVHANEIKKTEAKSTGTIGSACKRFPLAPKDAHLVTTKDNEPQVLGPIPFEFM 160
            M N TGYRRGTR MF+RD++++GV HLSTY+KTYK+ DIVD+K  GA QKGMPHK YHGKTGRV+NV+KRA+GVVVNKRV+G IL K+I VRIEHVKHS+CR DFL RV  NE+KK EAK+ GT    CKR P  P+ AH V TK N+P  L P+P+EF+
Sbjct:    1 MVNTTGYRRGTRYMFSRDFRRRGVIHLSTYMKTYKVADIVDVKANGAIQKGMPHKIYHGKTGRVYNVTKRALGVVVNKRVKGRILAKKINVRIEHVKHSKCRDDFLRRVKENELKKKEAKAAGTTVK-CKRQPAQPRPAHFVKTKRNKPTTLQPLPYEFV 159          
BLAST of mRNA_Ecto-sp8_S_contig95388.31151.1 vs. uniprot
Match: B0Z9M3_9BILA (60S ribosomal protein L21 n=1 Tax=Lineus viridis TaxID=56195 RepID=B0Z9M3_9BILA)

HSP 1 Score: 220 bits (560), Expect = 4.860e-71
Identity = 109/161 (67.70%), Postives = 125/161 (77.64%), Query Frame = 0
Query:    1 MGNPTGYRRGTRDMFARDYKKKGVEHLSTYLKTYKIGDIVDIKGCGAFQKGMPHKAYHGKTGRVFNVSKRAVGVVVNKRVRGNILPKRICVRIEHVKHSQCRKDFLDRVHANEIKKTEAKSTGTIGSACKRFPLAPKDAHLVTTKDNEPQVLGPIPFEFMA 161
            M NP GYRRGTR MF+R +KKKGV HLS YLK Y+ GDIVDIKG GA QKGMPHK+YHG+TGRV+NV++ AVGV+VNKRVRG IL KRI +RIEHVKHS CR DFL+RV  NE+ K EA+  G +   CKR P  PK AH V TK N PQV  PIP+EF+A
Sbjct:    1 MTNPKGYRRGTRYMFSRQFKKKGVTHLSKYLKCYRRGDIVDIKGDGAIQKGMPHKSYHGRTGRVYNVTQHAVGVIVNKRVRGKILAKRINLRIEHVKHSNCRLDFLNRVKRNEVIKREARVKG-VKPECKRLPQGPKKAHFVRTKGNLPQVFEPIPYEFVA 160          
BLAST of mRNA_Ecto-sp8_S_contig95388.31151.1 vs. uniprot
Match: A0A2B4RTB4_STYPI (60S ribosomal protein L21 n=2 Tax=Scleractinia TaxID=6125 RepID=A0A2B4RTB4_STYPI)

HSP 1 Score: 219 bits (557), Expect = 1.440e-70
Identity = 106/161 (65.84%), Postives = 126/161 (78.26%), Query Frame = 0
Query:    1 MGNPTGYRRGTRDMFARDYKKKGVEHLSTYLKTYKIGDIVDIKGCGAFQKGMPHKAYHGKTGRVFNVSKRAVGVVVNKRVRGNILPKRICVRIEHVKHSQCRKDFLDRVHANEIKKTEAKSTGTIGSACKRFPLAPKDAHLVTTKDNEPQVLGPIPFEFMA 161
            M N TG RRGTR MF+RD++K+GV HLSTYLK+YK+GDIVDIK  GA  KGMP+K YHGKTGRVFNV+KRAVGVVVNK+V+G ILPKR+ +R+EH+KHS+CR DFL RV  NE KK EAK +G     CKR P  P+ AH V TK N P+ L PIP+EF+ 
Sbjct:    1 MVNTTGIRRGTRYMFSRDFRKRGVIHLSTYLKSYKVGDIVDIKVNGAIHKGMPYKVYHGKTGRVFNVTKRAVGVVVNKQVKGKILPKRVNIRVEHIKHSKCRDDFLRRVKENEQKKKEAKESGGGKVDCKRKPAVPRTAHFVRTKRNTPETLEPIPYEFVV 161          
BLAST of mRNA_Ecto-sp8_S_contig95388.31151.1 vs. uniprot
Match: A0A3M6TFV0_POCDA (60S ribosomal protein L21 n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TFV0_POCDA)

HSP 1 Score: 218 bits (556), Expect = 1.200e-69
Identity = 106/161 (65.84%), Postives = 126/161 (78.26%), Query Frame = 0
Query:    1 MGNPTGYRRGTRDMFARDYKKKGVEHLSTYLKTYKIGDIVDIKGCGAFQKGMPHKAYHGKTGRVFNVSKRAVGVVVNKRVRGNILPKRICVRIEHVKHSQCRKDFLDRVHANEIKKTEAKSTGTIGSACKRFPLAPKDAHLVTTKDNEPQVLGPIPFEFMA 161
            M N TG RRGTR MF+RD++K+GV HLSTYLK+YK+GDIVDIK  GA  KGMP+K YHGKTGR+FNV+KRAVGVVVNK+V+G ILPKRI +R+EH+KHS+CR DFL RV  NE KK EAK +G     CKR P  P+ AH V TK N P+ L PIP+EF+ 
Sbjct:   55 MVNTTGIRRGTRYMFSRDFRKRGVIHLSTYLKSYKVGDIVDIKVNGAVHKGMPYKVYHGKTGRIFNVTKRAVGVVVNKQVKGKILPKRINIRVEHIKHSKCRDDFLRRVKENEQKKKEAKESGGGKVDCKRKPAVPRTAHFVRTKRNTPETLEPIPYEFVV 215          
BLAST of mRNA_Ecto-sp8_S_contig95388.31151.1 vs. uniprot
Match: A0A553P6A3_TIGCA (60S ribosomal protein L21 n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P6A3_TIGCA)

HSP 1 Score: 215 bits (548), Expect = 1.800e-69
Identity = 106/161 (65.84%), Postives = 122/161 (75.78%), Query Frame = 0
Query:    1 MGNPTGYRRGTRDMFARDYKKKGVEHLSTYLKTYKIGDIVDIKGCGAFQKGMPHKAYHGKTGRVFNVSKRAVGVVVNKRVRGNILPKRICVRIEHVKHSQCRKDFLDRVHANEIKKTEAKSTGTIGSACKRFPLAPKDAHLVTTKDNEPQVLGPIPFEFMA 161
            M NP GYRRGTRDMF+R YK KGV+HLSTYLK YK GDIVD+KG GAFQKGMPHK+YHGKTGRVFNV+K AVG++VNKRV+G ILPKRI +RIEHV HS+CR DFL RV ANE K+                   P  AH+V+ K+NEPQ L PIP+EF+A
Sbjct:    1 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDVKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGIIVNKRVKGRILPKRISIRIEHVTHSKCRTDFLKRVKANEAKE-------------------PIGAHVVSAKNNEPQFLAPIPYEFVA 142          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig95388.31151.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0U2THT2_9MAXI4.120e-9582.6160S ribosomal protein L21 n=3 Tax=Pseudodiaptomus ... [more]
A0A0U2TKX7_9MAXI1.680e-9481.9960S ribosomal protein L21 n=2 Tax=Calanoida TaxID=... [more]
A0A0U2URZ0_ACAPC5.380e-9177.6460S ribosomal protein L21 n=3 Tax=Acartia pacifica... [more]
C1BTU6_LEPSM1.660e-7673.2960S ribosomal protein L21 n=1 Tax=Lepeophtheirus s... [more]
A0A7M5XGD2_9CNID1.700e-7166.2560S ribosomal protein L21 n=2 Tax=Clytia hemisphae... [more]
UPI000A2A88722.410e-7166.8860S ribosomal protein L21 n=1 Tax=Exaiptasia diaph... [more]
B0Z9M3_9BILA4.860e-7167.7060S ribosomal protein L21 n=1 Tax=Lineus viridis T... [more]
A0A2B4RTB4_STYPI1.440e-7065.8460S ribosomal protein L21 n=2 Tax=Scleractinia Tax... [more]
A0A3M6TFV0_POCDA1.200e-6965.8460S ribosomal protein L21 n=2 Tax=Pocillopora dami... [more]
A0A553P6A3_TIGCA1.800e-6965.8460S ribosomal protein L21 n=1 Tax=Tigriopus califo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036948Ribosomal protein L21 superfamilyGENE3D2.30.30.70coord: 1..98
e-value: 3.5E-45
score: 154.0
IPR001147Ribosomal protein L21ePFAMPF01157Ribosomal_L21ecoord: 1..101
e-value: 5.4E-44
score: 148.2
IPR001147Ribosomal protein L21ePANTHERPTHR2098160S RIBOSOMAL PROTEIN L21coord: 1..161
IPR018259Ribosomal protein L21e, conserved sitePROSITEPS01171RIBOSOMAL_L21Ecoord: 37..62
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 3..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig95388contigEcto-sp8_S_contig95388:38..523 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig95388.31151.1mRNA_Ecto-sp8_S_contig95388.31151.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig95388 38..523 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig95388.31151.1 ID=prot_Ecto-sp8_S_contig95388.31151.1|Name=mRNA_Ecto-sp8_S_contig95388.31151.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=162bp
MGNPTGYRRGTRDMFARDYKKKGVEHLSTYLKTYKIGDIVDIKGCGAFQK
GMPHKAYHGKTGRVFNVSKRAVGVVVNKRVRGNILPKRICVRIEHVKHSQ
CRKDFLDRVHANEIKKTEAKSTGTIGSACKRFPLAPKDAHLVTTKDNEPQ
VLGPIPFEFMA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036948Ribosomal_L21_sf
IPR001147Ribosomal_L21e
IPR018259Ribosomal_L21e_CS
IPR008991Translation_prot_SH3-like_sf